Pseudomonas marginalis: U0037_28410
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Entry
U0037_28410 CDS
T10241
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab00260
Glycine, serine and threonine metabolism
pmab00460
Cyanoamino acid metabolism
pmab00630
Glyoxylate and dicarboxylate metabolism
pmab00670
One carbon pool by folate
pmab00680
Methane metabolism
pmab01100
Metabolic pathways
pmab01110
Biosynthesis of secondary metabolites
pmab01120
Microbial metabolism in diverse environments
pmab01200
Carbon metabolism
pmab01230
Biosynthesis of amino acids
pmab01240
Biosynthesis of cofactors
pmab04981
Folate transport and metabolism
Module
pmab_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U0037_28410 (glyA)
09102 Energy metabolism
00680 Methane metabolism
U0037_28410 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U0037_28410 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
U0037_28410 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U0037_28410 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U0037_28410 (glyA)
Enzymes [BR:
pmab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
U0037_28410 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WQD71913
LinkDB
All DBs
Position
complement(6192462..6193715)
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AA seq
417 aa
AA seq
DB search
MFSKKDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAQEPGFKVYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCIELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaaaagaccagatccagggatatgacgacgcactgctggcggccatgaat
gccgaagagcagcgtcaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aaacgcgtgatggaagcccaaggcagtggcctcaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgtgagcacgtggacaaagtagaggccctggccattgag
cgcgccaaacagctgttcggtgccgattacgccaacgtgcagccgcactccggctcctcc
gccaacagcgcggtgtacctggcgctgctgaacgccggtgacaccatcctcggtatgagc
ctggcccatggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcaacaccgacaccggcctgatcgactacgacgaagtcgaa
cgcctggccgtcgaacacaagccaaaaatggtcgtggcggggttctctgcctattccaag
accctggatttcccacgctttcgcgccatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgttgccggcctggttgccgccggcctgtacccgaacccgctgccgtac
gccgatgtggtcaccaccaccacccacaagaccctgcgcggtccccgtggcggcctgatc
ctggccaagtccaacgaagaaatcgagaagaaactcaacgctgccgtattccctggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcccag
gagcctggcttcaaggtctaccagcaacaagtgatcgacaacgcccaggccatggccagc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggaggcggacgccgccctcggtcgcgcc
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccacgcgtggtttcaaagtgccgcagtgcatc
gaactggccggctggatctgcgacatcctcgacaacctcggtgatgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
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