KEGG   Pseudomonas marginalis: U0037_28410
Entry
U0037_28410       CDS       T10241                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00260  Glycine, serine and threonine metabolism
pmab00460  Cyanoamino acid metabolism
pmab00630  Glyoxylate and dicarboxylate metabolism
pmab00670  One carbon pool by folate
pmab00680  Methane metabolism
pmab01100  Metabolic pathways
pmab01110  Biosynthesis of secondary metabolites
pmab01120  Microbial metabolism in diverse environments
pmab01200  Carbon metabolism
pmab01230  Biosynthesis of amino acids
pmab01240  Biosynthesis of cofactors
pmab04981  Folate transport and metabolism
Module
pmab_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    U0037_28410 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    U0037_28410 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    U0037_28410 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    U0037_28410 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    U0037_28410 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    U0037_28410 (glyA)
Enzymes [BR:pmab01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     U0037_28410 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: WQD71913
LinkDB
Position
complement(6192462..6193715)
AA seq 417 aa
MFSKKDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAQEPGFKVYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCIELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaaaaaagaccagatccagggatatgacgacgcactgctggcggccatgaat
gccgaagagcagcgtcaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aaacgcgtgatggaagcccaaggcagtggcctcaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgtgagcacgtggacaaagtagaggccctggccattgag
cgcgccaaacagctgttcggtgccgattacgccaacgtgcagccgcactccggctcctcc
gccaacagcgcggtgtacctggcgctgctgaacgccggtgacaccatcctcggtatgagc
ctggcccatggcggtcacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcaacaccgacaccggcctgatcgactacgacgaagtcgaa
cgcctggccgtcgaacacaagccaaaaatggtcgtggcggggttctctgcctattccaag
accctggatttcccacgctttcgcgccatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgttgccggcctggttgccgccggcctgtacccgaacccgctgccgtac
gccgatgtggtcaccaccaccacccacaagaccctgcgcggtccccgtggcggcctgatc
ctggccaagtccaacgaagaaatcgagaagaaactcaacgctgccgtattccctggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcccag
gagcctggcttcaaggtctaccagcaacaagtgatcgacaacgcccaggccatggccagc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggaggcggacgccgccctcggtcgcgcc
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccacgcgtggtttcaaagtgccgcagtgcatc
gaactggccggctggatctgcgacatcctcgacaacctcggtgatgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga

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