Pseudomonas marginalis: U0037_28465
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Entry
U0037_28465 CDS
T10241
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pmab Pseudomonas marginalis
Pathway
pmab00260
Glycine, serine and threonine metabolism
pmab01100
Metabolic pathways
Module
pmab_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U0037_28465 (dgcB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_7
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_21
OPT
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WQD71924
LinkDB
All DBs
Position
complement(6206256..6208214)
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AA seq
652 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRASKVDLLGGLLAMPKRYMVDLHHVVARD
KYIANTHVATALGFVLSALLAILVHGFGLHNRILGYALLLASVLMFVGATFVYLRRRNPP
SRLSKGPWMRLPKSLMAFSVSFFLVTLPVAGILPADFGGWLLAALLSVGVLWGVSEMFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLSDKSAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSINGGGKPL
GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPN
KGAEVLENLIATDNPGGFAPGGRLNWAADLNLPLLSDKGSAEVLFWVGDGAFDMRNQRTL
RAFVKVLKAAKVDFAVLGLEERDSGDVARRLGDEATFQLLATRNIQTLAKYSFKRIVTCD
PHSFHVLKNEYGAFNGNYLVQHHSTFMAELIGEGALNLGQHKGNSVTYHDPCYLGRYNGE
YEAPRQVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETGAEL
VAVGCPQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPAKAPAKLEPAEVH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaccttgctgcctattctcttgtttgccgcgttgggcctggccgtcctcggc
gccctgcgccgggtgaacatgtggcgccgtggccgcgcttccaaggttgacctgctgggc
ggcctgctggccatgcccaagcgctacatggtcgacctgcaccacgtggtcgcccgcgac
aaatacatcgccaacacccacgtcgcgaccgcgctggggtttgtgctgtcggcgctgctg
gcgatcctcgtacacggtttcggcctgcataaccgcatcctcggctacgccttgctgctg
gcctcggtgctgatgtttgtcggcgccacgttcgtctacctgcggcggcgcaatccgccg
tcgcgcctgtcgaaaggcccgtggatgcgcctgccgaaaagcctcatggcgttctcggtg
agtttcttcctggtgacgctgccggtggctggaatcctgccggctgattttggcggctgg
ctgctcgctgcgctgctcagcgtcggtgtgttgtggggcgtgtccgagatgttcttcggc
atgacctggggcggcccgatgaagcacgccttcgccggtgccttgcatctggcctggcac
cgccgcgccgaacgctttggcggtggccgttccaccggtttgaagccgctggacctcagc
gacaagtccgcgccgctgggcgtggagaaacccaaggatttcacttggaaccaattgctc
ggtttcgacgcctgcgtgcagtgcggcaagtgcgaagccgcgtgcccggcgttcgctgcc
ggccagccgctgaacccgaaaaagctgatccaggacatggtggttggcctggccggcggc
accgatgccaaattcgccggcagcccctatccatcaattaacggcggcggcaaaccgttg
ggcgaacacggtggcaacccgcatcagccgatcgtcaacggcctggtggacgccgagacc
ctgtggtcatgcaccacctgccgtgcctgtgtggaggagtgcccgatgatgatcgagcac
gtggacgccatcgtcgacatgcgccgccacctcaccctggaaaaaggggccacgccgaac
aagggcgccgaagtcctcgagaatttgatcgccaccgacaaccccggcggtttcgcaccg
ggtggtcgcctgaactgggcggcggatctgaacctgccgttgctcagcgacaagggcagt
gccgaggtgctgttctgggtcggcgatggcgccttcgacatgcgtaaccaacgcacgctg
cgagcctttgtcaaagtgctcaaagcggccaaggtggactttgccgtgctcggcctggaa
gagcgcgacagcggtgatgtagcccgccgtctgggcgatgaagcgacattccagttgctg
gccacgcgcaatatccagacgttggccaagtacagcttcaagcgcatcgtcacgtgcgac
ccgcacagtttccacgtgctgaagaacgagtacggcgcctttaacggcaactacctcgtg
cagcaccacagtaccttcatggccgagttgatcggcgagggcgcgctgaacctgggccag
cacaagggcaacagcgtgacctatcacgacccgtgctacctgggccgctacaacggcgaa
tacgaggcgccgcgccaagtgctgcgggcgctgggcatcgaggtcaaggagatgcaacgc
tcgggcttccgttctcgctgctgcggcggtgggggtggggcgccgattactgacattccc
ggcaagcagcgtatcccggacatgcgcatggacgacatccgcgaaaccggcgccgagctg
gtggccgtgggctgcccgcaatgtaccgcgatgctggaaggtgtggtcgagccgcgccca
ttgatcaaggacatcgcggagttggtggctgatgcgttgctggaagacgccgcaccggcc
aaggccccggccaaacttgaacctgcggaggtgcattga
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