Pseudomonas marginalis: U0037_28560
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Entry
U0037_28560 CDS
T10241
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pmab Pseudomonas marginalis
Pathway
pmab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0037_28560 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmab02000
]
U0037_28560 (choW)
Transporters [BR:
pmab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
U0037_28560 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
Motif
Other DBs
NCBI-ProteinID:
WQD71943
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All DBs
Position
6225830..6226675
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AA seq
281 aa
AA seq
DB search
MLTEQKIPLGQYIAAFVEWLTQHGANYFDAIASTLETMIHGVTFALTWFNPLALIGLIAL
LAHFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKP
MFYTLMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
QELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPDAKVGGDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgaacagaaaatcccactaggccagtacatcgctgccttcgtcgaatggttg
acccaacacggcgccaactacttcgacgcaatcgcatcgacactggaaacgatgatccac
ggcgtgacgtttgcgctgacctggttcaatccgctggcattgatcggtctgattgcgctg
ctggctcactttattcaacgtaaatggggactgactgtttttgtcatcgcctccttcctg
ctgatcctgaacctggggtactggcaggaaaccatggagaccctggcgcaagtgctgttc
gccaccctggtctgcgtggtgatcggtgtgccgctgggcattgttgccgcgcacaagccg
atgttctacaccctgatgcggccggtgctcgatctgatgcagaccgtaccgaccttcgtc
tacctcatccctaccctgaccctcttcgggctgggtgtggtgcctgggctgatttccacg
gtggtgttcgcgattgccgcgccgatccgcctgacctacctgggtatccgcgatgtacca
caagagttgatggacgccggcaaggcctttggctgctcgcgccgtcagttgctctcgcgc
attgaactgccccacgccatgccgagcatcgccgccggcattacccaatgcatcatgctg
tcgctgtcgatggtggtaatcgcggccctggtgggcgccgatggcctcggcaagccggtg
gtcaacgcactcaacaccgccgacattgccctgggcttcgaagccggcctggcgatcgtg
ttgctggccatcatgctcgaccgcatctgcaaacaacccgacgctaaagtagggggtgat
gcatga
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