KEGG   Pseudomonas marginalis: U0037_29870
Entry
U0037_29870       CDS       T10241                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pmab  Pseudomonas marginalis
Pathway
pmab00300  Lysine biosynthesis
pmab00470  D-Amino acid metabolism
pmab01100  Metabolic pathways
pmab01110  Biosynthesis of secondary metabolites
pmab01120  Microbial metabolism in diverse environments
pmab01230  Biosynthesis of amino acids
Module
pmab_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmab00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U0037_29870 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    U0037_29870 (lysA)
Enzymes [BR:pmab01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     U0037_29870 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WQD72193
LinkDB
Position
6501852..6503099
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEVGVH
CFNIESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRNSEARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgccgagcgctttggtaccccgacctatgtgtactcgcgtgcgcatatcgaagcccag
taccgctccttcaccgacgcgctcgatggcgtgccgcacctggtgtgctacgcggtcaag
gccaactccaacctgggcgtactgaatgtcctggcgcgcctgggcgctggtttcgacatc
gtctcccgtggcgagctggaacgtgtactggctgccggcggcaaggctgacaagatcgtc
ttctccggtgtcggcaagacccgcgaagacatgcgtcgcgccctggaagtcggcgtgcac
tgcttcaacatcgaatccaccgacgagctggagcgcctgcaaggggtggccgccgagatg
ggcgttcgtgcgccgatctccctgcgcgtcaacccggatgtcgacgccggcacccaccct
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacatccgcgccgcgcaactgccgaacctggaagtgttgggcgtcgactgccatatc
ggctcgcaactgaccagcctgcctccgttcctggatgcgctcgaccgcctgttggcgctg
atcgaccgcctgggcgaatgcggcatctatctgcaccacatcgacctgggtggcggtgtg
ggcgtgcgttaccgcgatgaagagccgccgctgattgccgactatatccaagccgtccgc
gagcgcatcgaaggccgcgacctgacgctgatgttcgagccgggccgttatatcgtcgcc
aacgcgggcgtgctgctgacccaggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgccccgcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgcaacagcgaagcccgcgcctatgacatcgtcggtccg
atctgcgagaccggcgacttcctggccaaggatcgtcagctggccctggaagaaggcgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcgttcgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa

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