Pseudomonas marginalis: U0037_30205
Help
Entry
U0037_30205 CDS
T10241
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pmab Pseudomonas marginalis
Pathway
pmab02025
Biofilm formation - Pseudomonas aeruginosa
pmab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
U0037_30205 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
U0037_30205 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmab02044
]
U0037_30205 (tssM)
Secretion system [BR:
pmab02044
]
Type VI secretion system
Imp/Vas secretion system core components
U0037_30205 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
WQD72257
LinkDB
All DBs
Position
complement(6570356..6573856)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAQTPADPNSTATAEELTTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDPERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNTDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSGLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQPTANTPVAADDPV
TAHFAELNSIVSKNEGEPAAIDGLLTDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRAGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgatcgcc
ctgagcctgatcatctggtttgtcgggccgttgctcgatgtgctggtgccggaagggcgc
cgttgggcgctgatcattctggtgtttgcggtatggattgcctaccgcgtgttccgcatc
atccaggcccgccgccaggccgccgaagtgatgcgcagcctggccgcgcaaaccccggcc
gaccccaacagcaccgctaccgccgaagaactcaccaccctgcgccagcgcatggacgag
gccctggcgctgctgaaaaaggccaagctgggtggcgatgaacgccgcaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccacggcgctggtcaac
tccgggctgcattttccgctggctgcgcagctgggcgccggtgccgtgcgcggcgtcggc
ggtacgcgcaactgcgactggtggttcaccgatcaagccgtgttgctcgacaccgccggc
cgctacaccactcaggacagcaactccacggtggataaagccgcgtggctgggcttcctc
gacctgctgaaaaagcagcgctcgcgccgcccgatcgatggcgcctttatcgccatcagc
ctgtcggacctgttgctgggcaccgaccccgaacgcgccgcccatgccgccgccatccgc
ttgcgtattcaggagctgtacacccaactgggcgtgcgcttcccgatctacctgatgctg
accaagctcgacctggtgccgggcttcatggagttcttcgacaacctcagcaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaaaaacaccgacagcccg
ctggcgcatctgcaaagcgagttcgccggcttggagcagcgcctcaacgaacgcctggtg
gagcgcctgcaacaggaacgcgaccccgcgcggcgcgacctgatctacggcttcccgcag
cagttcggtgcgttgaaggattgcctgcaaagcttcctcgaaggcgtgttcaaacccaat
gcctttgaagagcgcgtgttgctgcgcggcgtgtactttaccagcggtacccaggaaggc
agcccgattgaccgtctgatcggtgcgatggcccagagcatgaacctggaccgccagcac
ctggcgcgacagagtggcaccgggcgcagttatttcatcgaaaaactcttcactgcggta
gcgtttgccgagcgtggcctggtcggggtgaacccgaaggtcgagcgtcggcgcaaatgg
attgcgcgcggtgtgctggccgccaccgtggcgctggtcgtggtggtcagcggcctgtgg
tgggtgagttaccgcgccaaccaggcgtatatcgcccaggtcgaccaaaaggtcgcgcca
ctgggccagaccgtgcagaacctgagcccggcgcagcgcgacgtcctcgccgtgctgccg
ttgctcaacgccgttaagaacctggcgggcgactcgcccagctggtccgaaggcctcggg
ctgtaccagggcgacatgcttgaagccgagtccgccagtgtttaccgcaagctgttgatc
gcggtgttcgcgccacgcctggtgacgcgcatcgaagaacaactgcacggtggtggcaat
tccgacttcctctacgaaggcctcaaggcttacctgatgctcgctgacaccgagcattac
gacccggactttatcaaggcctggatcgccctcgactgggaccgcaacctgccccgcgat
ctgccggcggaccaacggcaggccctggccgggcatttgcaggcgctgttcgaacgtcat
ccgccgagcgcacgcctcgacccacgtttgattgatgacctgcgtcgccagttgcaacaa
ctgccggtggcccagcgcgtctacgaccgggtcaagcgccagaaactgcccgagggcatc
ccggactttcgcatcaacgaagccgccggtcgtgacgcagcgctggtgttcagccgcaaa
agcggcaagccgctgggcgagccgttgagtggtttcttcaccgccaaaggctatcgccag
gcgttcctgctgagcagcctgaaccagaccggcaccctcgccgaagagcagtgggtgttg
ggccacgaacaggccgaccaacagaacgtggtgagcctggccgccgacgtgcgccgcctg
tatttccaggattaccagcgccagtgggatgccttgctcgcggacatcgacttcgtgccg
atcaccagcgtggcccaggcggccgacgtgctgcgggtgatttccggcccgacctcgccg
ctgaaaaaactgctggtggccgtggccaaggaaaccgatctgcaagccgaagaacgccag
ctggccgccaaaggtgtgccggtggaagggggcgtcgacaaactcaaggagcgcctgggc
agcctgctcggccaggagcaaccgaccgccaatacgcccgtcgctgcggatgatccggtg
accgcgcacttcgccgaactcaacagcatcgtcagcaagaacgaaggcgagccggcggcc
atcgatggcctgctcaccgacatgaatgcgctgtatgtgcaggtcagcgccatggtaggc
gccagcggcgatgcgttgctcggcgaagcaaagaaccaggcggcggctgcggccacacgg
gtcagcctgaatgccgagcgccagccgccgttggtgcagggcatggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggcgtgcgtaaccagttgaacgcggcctgggtc
agtgaagtggtcaacgtgtatcgccagtcgctggccgggcgttacccgatgtcgccgggc
agtgcgcgggatgccaccctggatgacttcggccagttctttggggtgggcggggtgatg
gacaactacttccgcaaatacctgcagccctacgtggacacctccgcgcagacctggcgc
tggcaaccgggcgccgcacagaaactcgggattgcaccgggtgtgctgcaaaccttccag
cgtgcggcgacgatccgcgatgcgttcttccgcgccggggggacccagccgattgtgcgg
ttcgaactcaagccggtgtcgatggacccgactatcacgcagtttttgcttgacctcgac
ggccagcaattgagctacgaccacggccccagccgcccggtggcgatgcaatggccgaac
cctggcagtattggcgtggtgcgcatttcgatcatgccgccatcggccagtggccgttcg
ggcgtgactctggacgggccgtgggcctggttccgcttgctcgagcaatcggacctcacc
gccggtaattcgccggaccgtttcaacctgcgcctgcgcgtcgacggtgcgagcatcgcc
tacgagctgcgcgccaacagtgccttcaacccgttcaagagccgcgtgctcagcggcttc
agcctgccggagcggctatga
DBGET
integrated database retrieval system
