Pseudomonas marginalis: U0037_30510
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Entry
U0037_30510 CDS
T10241
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmab Pseudomonas marginalis
Pathway
pmab03420
Nucleotide excision repair
pmab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0037_30510 (uvrD)
03430 Mismatch repair
U0037_30510 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmab03400
]
U0037_30510 (uvrD)
Enzymes [BR:
pmab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0037_30510 (uvrD)
DNA repair and recombination proteins [BR:
pmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0037_30510 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
U0037_30510 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WQD72314
LinkDB
All DBs
Position
6651526..6653709
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gccgcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcaacgcttggtcaagcgggtgatccgcgaactggggctcgacgaacagcgctggccg
gcgcgccaggcccaatggtttatcaacggccagaaagacgaaggcctgcgcccgcagcac
atccaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaagcctacgag
gccgcgtgcgtacgcgccggggtgatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgacaacccgggtttgctggcccattaccagaaacgcttccgccacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaaa
ggtggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgccgtcaccatccgc
ctggagcagaactaccgctccaccgccggtatcctcaaggcggccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggtggcgaaggcgaagccatc
aacttgtacgccgcgttcaacgagcacgatgaagcgcgctacgtagtggaaaccatcgaa
agtgcactgaaaaccggcctggcgcgcagcgatatcgccattttgtatcgctccaacgcc
caatcgcgggtcttggaagaagccttgctgcgcgaacgcatcccgtaccgcatctacggt
ggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcttgctg
gaaggccgcggcaacgatgcggcgctggagcgggtgatcaacatcccggcccgtggcatt
ggcgaaaagactgtcgaagccattcgcgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaataaaggcctgaccggccgcgccgccggggcgctg
ggtgtgtttgtcgaactgatcgagaacctcgccgccaagtgcgcggaaatgcctctgcac
ttgatgacccagaccgtgatcgagcagtccgggctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgtgcg
ttcgaaaacaccgaggaagacgaagagctgacaccgctcgccgctttcctcggccatgcg
tcgctggaagccggcgatacccaggccgatgagcatgaagacagcatccagttgatgacc
ttgcacagcgccaagggcctggagttcccgtacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagccgggccgtcttgaggaggagcgccgcctg
gcctacgtgggcatcacccgcgcgatgcagaacctggtgatgacctacgccgagacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgtttcgtacgtgaagtgccgaag
gggctgatccaggaagtgcgcttgtccaacagcgtcagccgcccgttcggcggaggtcag
cagcagaactccagcagtatgttcgccggttccgagattccggaaacccagttcagcctt
ggccagcaggtcaggcattcggtgttcggcgaaggcgtgatcctcaacttcgaaggcgcc
ggtgcccaggcgcgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaagctcgaagccatctga
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