Pseudomonas marginalis: U0037_30790
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Entry
U0037_30790 CDS
T10241
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmab Pseudomonas marginalis
Pathway
pmab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0037_30790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmab03021
]
U0037_30790
Transcription machinery [BR:
pmab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0037_30790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_20
HTH_40
HTH_11
Trp_repressor
HTH_24
HTH_7
Annexin
TnsD
PhyR_sigma-like
Imm71
HTH_Tnp_4
DUF6273
HAC6_helical
DUF2774
Motif
Other DBs
NCBI-ProteinID:
WQD72369
UniProt:
A0ACD4XTG9
LinkDB
All DBs
Position
6713822..6714328
Genome browser
AA seq
168 aa
AA seq
DB search
MSPSSHTAAVQNIYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHAAQIVEPRD
YLATIARGLVIDRYRRHAIEQAYKQTLAERPEANAISEEDKAIILETLVAVDKALSALGE
RARRIFMLSQIEGLTYQQIADQLQVSLTTVKKHMIRALTECSLIMASL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttcctcacacacggctgcggtccagaacatctatgagcagcaccattcctgg
ctgcatgggtggctcaaaggtaagttgcataacgcctgcgatgcggccgatgtggcgcac
gatacgttcgtgcgcatcctgggcgggcggcatgcggcgcagatcgttgaaccgcgtgac
tatttggcgaccatcgccagaggcctggtgattgatcgttaccgtcggcacgccatcgaa
caggcttacaagcagaccttggccgaacggcctgaagcgaatgccatcagcgaagaagat
aaagccatcatcctcgagacgttagtggctgtggataaagccttgtctgcactcggtgag
cgggcccggcggattttcatgctgtcgcagatcgaggggctgacttatcaacagattgcc
gatcagctccaggtgtcactgaccacggtgaagaagcatatgatccgtgcattgactgaa
tgctcgctgatcatggccagcttgtaa
DBGET
integrated database retrieval system
