Papilio machaon (common yellow swallowtail): 106707801
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Entry
106707801 CDS
T05138
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03030
DNA replication
pmac03410
Base excision repair
pmac03420
Nucleotide excision repair
pmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106707801
03410 Base excision repair
106707801
03420 Nucleotide excision repair
106707801
03430 Mismatch repair
106707801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmac03032
]
106707801
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106707801
DNA replication proteins [BR:
pmac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106707801
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106707801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
Rad17
AAA_14
NTPase_1
AAA_5
AAA_33
RNA_helicase
RFC1
AAA_16
AAA_17
AAA_19
RuvB_N
AAA_18
AAA_6
AAA_assoc_2
DUF1757
AAA_11
Motif
Other DBs
NCBI-GeneID:
106707801
NCBI-ProteinID:
XP_014354724
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MSRDIRSFFKPKTAVKDDDSDVIPESPQMEIKKKEKKPRRKRAISDDSDEDVQKKKIQKK
EHKEDLNKRKQKKFNHNTLKEVKSVDLFDNGSIKRSEPLLVKKNKKTETGIHSDDEFEMS
LLELDQIEEAEGTNKSKDDNKEKDKTETNESTNKKIKGTVTKPEKSPTKREEQTVKPERT
PKEKSKETKKNLEKDLQSNDEKSPKEKSKHAKKNYKNETHNEDVKINGIEQTKADFSEFI
ENSQTEEVRKGKKRKMDKSLNESVLTDEERHERKIMSAALYKNYLNRSGPKHLGAKEIPK
GKPDCLKDCAFVLTGVLDSFEKEDITKAINSFGGCVKSAVTKKVTHVLAGEDPGPAKMAK
AEELGIKIINEDEFLQMIIDLSNKNKTIIKYEPKSAKKQPKKAQSKSPTDKKENDTKIDV
KAIKIKSKSEIKTETKIEKIDISMHKSKSEGKSDITENANEGKIQQPEPTTTGVFKSGAQ
TVNTMLWVDKYKPVSVKQIIGQHGPNSNVKKLTNWLTKWYANRKAKLPKPNPWAKNDDGG
YYKAALLSGPPGVGKTTTVSLVCKELGFDVVEFNASDTRNKTLIKEQIGELLTTTSLSGY
ARGDTSKQAISKKHVLVMDEVDGMAGNEDRGGLQELIGLIKSTSVPIICMCNDRNSQKMR
SLVNYCYDLRFNRPTVDQIKSAMMSTCFKEHIKIPGEALSQLIVAAGQDVRQTLHLLSIW
AADPNLADSERLKNDAKRIKKDIKLGPWEAVRKVFTESEHKNMSINDRSDLFFYDYSLAP
LFVQENYIQVVPHCPKDKVLDRLSMASDSISLGDLVDARIRGSQAWNLLPIQILERSATD
MKSN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtctagggatattcgttcatttttcaaaccaaagacagctgtaaaagatgatgatagt
gatgttataccggaatcacctcaaatggagatcaaaaagaaggagaagaagccacgaagg
aaaagggcaatatcagatgattcagatgaagatgttcaaaaaaagaaaattcaaaagaaa
gaacacaaagaagatttgaataaaagaaaacaaaagaagtttaatcataacacattgaaa
gaggttaaatcagttgacctttttgataatggatcaataaaaaggagtgaacctttatta
gttaagaaaaataagaaaaccgaaactggaattcattcagatgatgaattcgaaatgagt
cttttagaacttgatcaaattgaagaagcggaaggtacaaataaatcaaaagatgacaat
aaagaaaaagataaaacagaaacaaatgaatcaacgaataaaaaaattaaaggcactgta
acaaaaccagaaaaaagtcctacaaaaagagaagaacagacagtcaaaccagaaagaact
ccaaaagaaaaatctaaggaaacaaagaaaaatttagaaaaggacctacagagtaatgat
gaaaaaagtccaaaagaaaaatcaaagcacgcaaagaaaaattataaaaatgaaacacat
aatgaagatgttaaaataaacgggattgaacaaacaaaggcagatttcagtgaattcatt
gaaaacagtcaaaccgaagaagttcgtaaaggcaagaaacggaaaatggataaaagtctt
aatgaatctgttctcacagatgaagaaagacacgaaaggaaaatcatgtctgcagcactt
tataaaaattatttaaatagatctggaccgaaacatttaggtgcaaaagaaattccaaag
ggtaagccagattgtttaaaagattgtgcctttgttctaactggagtattagattcattt
gaaaaagaagatattacaaaagcaataaacagttttggggggtgtgttaaaagtgctgta
acgaaaaaggtaacgcatgtccttgcaggcgaggacccgggtccagcaaaaatggctaaa
gctgaagagctggggatcaaaataatcaacgaagatgaattcttgcaaatgattatagat
ttatctaacaaaaataaaactataataaaatatgaaccaaaatcggcaaagaaacaaccc
aaaaaagcacaatctaaatcaccaacagataaaaaagagaatgataccaaaatagatgtt
aaagcaataaaaattaaatctaaaagtgaaattaaaacagaaacgaaaatagaaaaaata
gatataagtatgcataaaagtaaatctgagggaaaatcagatataaccgaaaatgcgaac
gaaggaaaaatacagcaaccggaaccaactactactggtgtcttcaaatcgggtgctcaa
acagtgaacaccatgttatgggttgacaaatacaaaccagtgagcgttaaacaaatcata
ggccaacatggacctaacagtaatgttaaaaaactgacaaattggttgacaaaatggtat
gccaatcgcaaagctaaacttcctaaacctaatccgtgggctaagaatgatgatgggggt
tactataaagcggccctactttctggacctcctggtgttggtaaaacaactacggtgtct
ctagtgtgcaaggagttgggctttgatgtggtggaattcaatgcatcagataccaggaat
aaaacattaataaaggagcagatcggtgaactgctgacaactacttcattatcaggatat
gctagaggtgatacaagtaaacaagctatttcaaaaaaacatgttttagtaatggatgag
gttgatggtatggctggtaatgaagatagaggtggtttacaagaattaattggattaata
aagtcaacatcagtgcccataatttgcatgtgcaatgatagaaatagtcagaagatgaga
tcactagtcaactactgctacgacctgcgcttcaacagaccaactgttgatcagatcaag
tcagcgatgatgtcgacgtgtttcaaagagcacataaagatccctggtgaagcgctgtcg
cagctgatcgtagccgcggggcaggatgtgaggcagacgctgcacctgctgtccatatgg
gccgcagatcccaacctcgctgattctgaacgtctcaagaatgatgctaaaaggatcaag
aaggatattaaattgggtccatgggaagcagtaagaaaggtgtttacagagtcggagcac
aagaacatgtcaataaatgacagatcggaccttttcttctacgattacagtctggcgccg
ctctttgtgcaggagaattacatacaagtggtgccacattgtcccaaggacaaggtattg
gatcgtctgagcatggcatcggacagcatcagcctgggcgatctggtggatgcgaggata
cgaggcagtcaggcttggaacttactgcccatacagattctggagcgtagtgcgactgac
atgaagtctaactga
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