Papilio machaon (common yellow swallowtail): 106708287
Help
Entry
106708287 CDS
T05138
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106708287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106708287
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106708287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
RB_A
Motif
Other DBs
NCBI-GeneID:
106708287
NCBI-ProteinID:
XP_014355253
UniProt:
A0A194RMW6
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAAALMDENAEIDWGNERLTRAQKAVEANVYDVDSWSLLIREAQTRPINDVRTMYEKLIA
AFPTTGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYK
EKMAQAYDFALDKIGLDIHAYPIRAVITPIIGIETLWKDYIAFEQGINTIIAERMAMERS
REYMNARRVAKELETVTRGLNRNMPATPPTVDREEMKQVELWKKYISWERSNPLRSEDTA
LVARRVMFAIEQCLLCLAHHPDVWHQAAQFLDHSSKLLQEKGDSNAARLFSEEAAAVYER
ATSGPLKQSTLLHFAHADYEESRLHYNKVHQVYTRYLDMEDIDPTLAYVQYMKFARRAEG
IKSARTVFKRAREDPRSRYHVFVAAALMEYYCSKDKNIAFRIFELGLKKFSHIPEYVLCY
IDYLSHLNEDNNTRVLFERVLSSGSLKPESSVDIWNRFLEFESNIGDLVSIVKVEKRRQA
VLEKIKEFEGKETAQLVDRYKFLDLYPCSIAELKSIGYTEVASMSNKSWALGGPLAGISP
ELAAVILGQKDNDPNKDIARPDTNQMIPYKPKVNPLPGEHPISGGTFPMPPACAHVCTLM
PPPTCFRGPFVAVDRLMQLFNRITLPDKPPAPTQENGCDTKLFDLARSVHWIVDDEGITT
VSNKARRRKIGEDSDDDDLGVAPPVNDIYRQRQQKRVK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcattgatggacgaaaatgcagagattgattggggaaatgaaaggttaact
cgagctcaaaaagctgtggaagcgaacgtatacgacgtggattcatggtctctactcatc
agggaagcccagacgaggcctatcaatgatgtacggactatgtatgaaaaattaattgct
gcatttccaaccactggccggtactggaagatatacattgaacaagagatgaaggcgaga
aattttgaaaaagttgaaaagctgttccagcgctgccttatgaagatccttaatattgaa
ctctggcgtctctacttaaactacgtcaaagaaactaaatgtatgctgcctacatacaaa
gaaaaaatggcacaggcttatgactttgctttagataaaataggcttagatatccacgct
tatccgatcagagcggttatcactcctattataggaattgaaacattatggaaggattat
attgcatttgagcaaggcatcaatacaattattgctgagcgtatggcaatggagcgatcc
cgagagtatatgaacgcgcggcgcgtggctaaggaactggagacagtcacgcggggtctt
aacaggaatatgccggccacgccgcctactgtcgatagagaggaaatgaaacaggtggaa
ctgtggaagaagtatatatcatgggagagaagcaaccccctccggtcggaggacacggcg
ctggtcgcccgccgcgttatgttcgcgattgagcagtgcttgctctgcctcgcgcaccat
cccgacgtatggcaccaagctgcgcagttcctcgatcactcctcaaagctactgcaagag
aaaggggattcgaatgcggcgcgtctgttctctgaggaggcggcggcggtgtacgagcgc
gcgaccagcggccctctcaagcagtccacgctgttacacttcgctcacgccgactacgag
gagagccggctccattacaataaggtgcatcaagtatatacgagatatctagacatggag
gacatcgaccccacactcgcttacgtgcagtatatgaagttcgcacgacgcgctgagggc
atcaaatccgccagaactgtgttcaaacgtgccagagaagatccaaggtctcgttaccac
gtgttcgtggcggctgctctcatggagtactactgctcaaaagataagaacatcgccttt
agaatctttgagctcggtctaaagaagttttcacacattccagaatacgtcctctgctat
atcgactatttgtcacatttaaacgaggacaacaacactcgcgtgctgttcgagagagtg
ctctcttcgggcagtctgaagcccgagagctcagtagacatctggaacaggttcctggaa
tttgagtccaacatcggtgatcttgttagtattgttaaagtggagaagagaagacaggct
gtgctggaaaagatcaaagagttcgaaggcaaggagactgcgcagctggtggaccgctac
aagttcctcgatctgtatccttgcagtattgctgagctcaaatctatcggatatactgag
gtagcgtctatgtcgaacaaatcgtgggcattgggcggcccactggctggcatatctccg
gagctggcggctgttatacttggacagaaagacaatgatcctaataaagacatcgctcgt
cccgacaccaatcaaatgattccatacaagcccaaagttaatccgttaccgggagaacat
ccgatatcaggcggcacgttcccgatgccacctgcgtgtgcgcacgtgtgcacactgatg
ccgccgcctacatgcttccgcggacccttcgttgccgtcgaccgcctcatgcagctcttc
aaccgcatcacgctgccagataaaccaccggcgccgacacaagagaacggttgcgacact
aaattatttgacttagcgcgctccgtacactggatagtagatgatgagggaatcaccacc
gtctccaataaggcaagacgaagaaagatcggcgaagattcggatgacgatgacttgggc
gtcgccccacccgtcaacgacatttatcggcagagacaacaaaaacgagtcaagtaa
DBGET
integrated database retrieval system
