KEGG   Papilio machaon (common yellow swallowtail): 106709061
Entry
106709061         CDS       T05138                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106709061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmac03041]
    106709061
   03036 Chromosome and associated proteins [BR:pmac03036]
    106709061
Spliceosome [BR:pmac03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106709061
 Complex B
    106709061
 Complex C
   U2 SnRNP specific factors
    106709061
Chromosome and associated proteins [BR:pmac03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    106709061
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 106709061
NCBI-ProteinID: XP_014356221
UniProt: A0A194RFM2
LinkDB
Position
Unknown
AA seq 1338 aa
MDKIPRTHEAIEAQIREIQQKKNELPENGTGKGVSLGDTYYDSDIYDNAGHGGKSRYDGY
VTSIAANDEVEDEDVENVPISQKRPGYTAPASLLNDIAQSDKDYDPFADKRRPTIADRED
EYRQKRRRMIISPERNDPFAEGGKTPDVGSRTYTEIMKEQYLRAEETELRKKLLEKAREG
TLKPVAQPNGEVAKPAAAKRKGRWDQSSEDTPSVKKAVTATPSSQATPSWENERGAWEET
PGASGRGGETPGATPSARVWDATPGHATPGQATPGRDTPAQQASRRNRWDETPKTDRETP
GHNSGWAETPRTDRGVGVDTIQETPTPGTKRRSRWDETPGATPIPATPTPSHATPSHATP
SHATPSHATPTPHTPVFTPGGSTPVGVKAMAMATPTPGHVAAMTPEQLQAYRWEKEIDER
NRPYTDEELDAMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLAGTPIGFFMQTEEVGGS
AAAAARLLEPQPKGGQQLPFMKPEDAQYFDKLLIDVDEDALSPEELKERKIMKLLLKIKN
GTPPMCKAALRQITDKARDFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSL
VEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEPQYI
MDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDDNEQYRK
MVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVK
PYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
PEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNIFETSPHL
VQAFMDAVEGMRVALGPIKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQDSLVAGYPR
IQNDPNNHFLRYELDYTL
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggataaaatacctcgcacccatgaagctatagaagctcagataagggagattcaacag
aaaaagaatgaattgccagaaaatggcacagggaaaggagtgtcattgggagacacttat
tatgacagtgacatttatgataatgctggacatggtggaaagtcaagatacgatggttat
gtgacatcaattgctgctaatgatgaagttgaagatgaagatgttgaaaatgttccaata
tcacagaaaagaccgggctacacagcacctgcatcccttcttaatgatatagcacagagt
gacaaagactatgacccatttgcagataaaagaagacctacaattgcagatagagaagat
gagtaccgccaaaagagacgcaggatgataatatcccccgaaagaaatgacccatttgcc
gaaggtggcaaaactcctgatgttgggtcaaggacatatacagagatcatgaaagaacaa
tatttgcgagctgaagagacagagttaagaaaaaaattgttagagaaagctagagaggga
actcttaaaccagtggctcaacctaatggggaagtagctaaacctgctgctgctaaacgg
aagggtagatgggatcagagctctgaagatacaccatctgtaaagaaagcagtcacagca
acacctagctcccaagccacgccttcatgggaaaatgaaagaggtgcctgggaagaaacg
cctggtgctagtggacgtggcggcgagacacccggcgctactccatccgcacgcgtgtgg
gacgccacgcctggacacgccacaccgggccaagccacgcccggccgagacacgcccgca
cagcaggcctcccgacggaaccgctgggatgagacgcccaaaactgacagagaaacacct
ggacacaacagtggatgggcagaaactccacgtacagatcggggtgtgggagttgatact
attcaagagacaccgacaccggggacgaaacgtagatcgcgttgggatgaaactcctgga
gcgactcctatacccgccacacccacaccttcgcacgccacgccctcgcacgcgacgccc
tcgcatgctacgccctcacacgccacgcccacgccgcacacgccggtgtttacgccagga
ggatcaactcccgtcggtgtgaaagccatggcgatggcgacacccacgcctggccacgtc
gcggccatgaccccggaacagctgcaagcttaccgctgggagaaagaaatagacgaacgc
aaccgcccgtacaccgacgaagaattggatgccatgttcccacccgggtacaaggtttta
ccgcccccggccggttacgtcccgattcggacgccggctcgtaagctgaccgcgacgcct
acaccattggctggtaccccaatcggctttttcatgcagacggaggaagtcgggggctcc
gcggcggcggcggcgcggctgctggagccccagccgaagggcgggcagcaactgcccttc
atgaagccggaggacgcccagtactttgacaaactgctcattgacgtcgacgaggacgca
ctctcgccggaggagctcaaagagaggaagatcatgaaactactacttaaaattaagaac
ggcaccccaccgatgtgcaaggcggcgctgcgtcaaataacggacaaggcgcgcgacttt
ggcgcggggccgctctttaaccaaatcctgccgctgctcatgagccccacactggaggat
caggagcggcatctcctcgtcaaggtcatcgacagaattctgtacaagctggatgatctt
gtacgaccttatgtgcacaagatcttggtggtgatagaacctctattgattgatgaagat
tactatgcgcgtgtggaaggtcgtgagattatttcaaatctcgcgaaggcggcaggtctg
gccaccatgatctccacaatgagacctgatatagacaacattgatgaatatgtacgaaac
actaccgcaagagcattcgctgtcgtagcttcggctttaggtataccttctctcctgcca
ttcttgaaggctgtatgcagatctaagaagtcatggcaggcacggcacactggaataaag
attgtgcaacagattgccatcctcatgggctgtgctattctgccacatcttaaatcattg
gtggagattattgaacatgggcttgtggatgaacaacaaaaagtacgaactatcactgcc
ttagccagcgccgctttagccgaagctgcaactccatacggtattgagtccttcgattca
gtactcaagcctttgtggaagggtatcaggactcacagaggcaaaggtctggccgctttc
ctcaaggctattggatacctcattccgcttatggacgctgagtatgctaattattataca
agagaagtgatgcttatccttattcgagaattccagtctcccgatgaagaaatgaaaaag
attgttttgaaggtagtgaaacagtgttgcggcaccgacggtgtggagccccagtacatc
atggacgagatcctgccgcacttcttcaagcacttctggaaccaccgcatggccttggac
agacgtaactaccgacaactggttgatactactgtcgaaattgctaataaggtcggagct
tcagagataataaacagaatagtggacgacctgaaagacgacaatgagcaatacaggaag
atggttatggagtcaatcgaaaagatccttgccaacttgggtgctgcggatatcgactcc
aagttagaagaagcgcttattgatggcatcctgtacgcattccaggaacaaactactgag
gacgtggtaatgctgaacggtttcggcacgatcgtgaaccagttgggcaagcgcgtgaag
ccctacctgcctcagatctgcggtatcatcttgtggcgcatgaacaacaagtctgccaaa
gtgcgccagcaggccgctgacctcatctcacgcatcgccgtcgtcatgaagacatgccaa
gaggaaaaattaatgggtcatcttggtgtggtactttatgaatatttgggtgaagagtat
ccggaagtgttggggtcgatactcggcgcgctgaaggcaatcgtcaacgtgatcggtatg
acgaagatgacgccacccatcaaagatctcctgcccaggctcactcccatattgaaaaac
agacatgagaaagtacaagagaattgtatcgatctagttggtcgcatcgcggaccgcggg
cccgagttcgtgtcggcacgcgagtggatgaggatatgcttcgagctgctggagctgctg
aaggcgcacaagaaggccatacgacgagccacagtcaatacctttggttacatcgccaag
gctatcggcccacacgatgtgctcgccacgttgcttaataacttgaaggtgcaagagaga
cagaacagagtatgtacgacggtggccatcgctatagtggcggagacgtgttcgccgttc
actgtgctgccggcgctgatgaacgagtaccgcgtacccgagctcaacgtacagaatggt
gtgctcaagtcgctgtccttcctgtttgagtacatcggcgagatgggcaaggattatatc
tacgcggtctgtccattgctggaagacgcgcttatggacagagatcttgtacatcggcaa
acggcgtgcgcggcgataaagcacatggcactgggcgtgtacgggttcggttgcgaagac
gcgctcattcacctgctcaaccacgtgtggcccaacatttttgagacgtcgccgcatttg
gtacaggctttcatggacgctgtggagggcatgagagtcgccctcggacccatcaagata
ttgcaatatgcgctacagggcttattccatcccgcgaggaaagtgcgcgacgtgtactgg
aagatctacaacacgctgtatattggcgggcaggactcgctggtggcgggatacccgcgc
atacaaaacgatcccaacaaccacttcctcagatacgaactcgattacacgctgtag

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