Papilio machaon (common yellow swallowtail): 106709109
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Entry
106709109 CDS
T05138
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106709109
03016 Transfer RNA biogenesis [BR:
pmac03016
]
106709109
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106709109
Spliceosome [BR:
pmac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106709109
Transfer RNA biogenesis [BR:
pmac03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106709109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
106709109
NCBI-ProteinID:
XP_014356295
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MTAFEEFGVLPELGKAIEEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQEGKTSKVILKTATEWTLSFFDRTEALAVTPDGLRCQSRDHKDWHGCRA
TKGVHTKGAYYYEAIVTDEGLCRVGWSTQGARLDLGTDRLGFGYGGTGKKSNAKQFDDYG
GAYGKNDVIGCLLNLNSGEIRYTKNGEDLGIAFKLDQSRKSDCYFPAVVLKNAEMSFNFG
ATPFKHTPPKDYVALCNAPKECVKLNVVSSVQSTDSKPVNNAPQAIIIEPSRELAEQTCN
QITKFKKYLENPKVRELLVVGGINVKDQINQLNAGIDIVVGTPGRLEDLIQGGKILILKK
SNFRAEKLMHFPTWVDLKGEDSVPETVHHVVVNVDPQKDRSWETLLINVTLPDEKSNYVH
RIGRVGRAERMGLAISLVATVPEKVWYHGEWCSSRGRNCWNTNLIDDRPKGCCMWYNEPQ
YLADIEDHLNITIQQIEPDMKVPCNEFDGKVVYGEKRKQTGTGYQDHVSQMAPVVRSLQE
LESQAQLYYLKSHHNAVITA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaggaatttggggtgcttcccgaactgggaaaggctatcgaagaaatg
gagtggacattaccaacagatgttcaagcggaagcaataccattaatcttaggtggcgga
gatgtccttatggctgctgaaaccggcagtggcaagaccggcgcgttctgtctacctatc
ttacaaatagtttgggaaactttaaaagatatacaagaaggcaagacaagtaaagtgatt
ctaaaaacagctactgaatggacgttgtcgtttttcgatcgaacagaagctttagcggta
acgccggatggtttgcggtgtcaatctcgagatcataaagactggcacggctgtagggct
accaaaggtgtacacacaaagggggcttattattatgaagctattgtaactgatgagggt
ctttgccgtgtcgggtggtcaacgcaaggtgcaaggctagatttagggacagatagactt
ggttttggctatggtggcactggtaagaagtcaaatgccaaacagtttgatgactatgga
ggtgcctatgggaaaaatgatgtaataggttgtttattgaaccttaacagtggagagatt
cgttacacaaagaacggagaggacctaggtattgcattcaaactggatcagtcacgcaaa
tctgattgttatttccctgctgttgttctaaagaatgctgaaatgagttttaactttggt
gctacacctttcaagcatacaccacctaaagattatgtggcactctgcaatgcacccaaa
gaatgtgtcaaactaaatgttgtctcttcagttcagtcaactgacagcaaacctgtcaac
aacgctccacaagctatcatcatagagccatcacgtgaacttgctgaacaaacatgtaat
caaattactaaattcaaaaaatacttggaaaaccctaaagttagagagttgcttgtagtt
ggtggcatcaatgttaaagatcagataaaccagctcaatgcaggtatagatattgttgtt
ggcactccggggagacttgaggacctcatacaaggaggtaagatattgattctcaagaag
tctaattttcgtgctgagaaactgatgcattttccaacatgggtggatttgaaaggcgag
gactctgtaccggagacagtacaccatgttgttgtcaatgtagacccgcagaaggaccgc
tcctgggagacattactgatcaatgtgaccttacctgacgagaaatctaactatgttcat
cgcatcggtcgtgttggtcgtgcggagcgcatggggcttgctattagtcttgttgctact
gtaccggaaaaggtgtggtatcacggcgagtggtgctcgtctcgcggccgcaactgctgg
aacaccaaccttatagacgacaggcccaaaggttgctgcatgtggtacaacgagccacag
tacttggccgatattgaagatcatttgaatataactatacaacaaattgaaccagacatg
aaagtgccgtgcaatgagttcgatggtaaagttgtgtacggtgaaaaaaggaagcaaacc
ggcactggctatcaggatcacgtgtcacagatggcgccagtggtgcgttccctacaggag
ctggagtcgcaggcgcagctttattatcttaaatcccatcataacgctgtcatcacagcg
taa
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