Papilio machaon (common yellow swallowtail): 106709218
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Entry
106709218 CDS
T05138
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106709218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106709218
Enzymes [BR:
pmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106709218
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106709218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106709218
NCBI-ProteinID:
XP_014356457
UniProt:
A0A194RGG6
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MGLNTTFSSTVPELASFDLDSVQFLMFSDEDIKKLSVLKITNPISFDSLGNATKGGLYDA
ALGPVRDRNDFCGTCSNTMLHCTGHFGHIELPLVVVNPLFIKTIYILFRISCLKCFKIQM
DDKMKSILKLQLELIEAGHVTAALDLENVVGDVKSYNSETSPDKPNKLIRRCQKLLKTKD
PINKTFQSKNSDKLRTKVINNFFKAINITKTCMYCRNKLIKVTTSDNKIMYNMTSDDTKG
IKILMPDEIKRYCSAITQNDEDLLSYCIPVLKNSNCKPSSDIFFMHSVPVLPPSVRPCNV
LRGELLEHPQTNIYKSILNSSFKARAILQVLSSSDQQKAIDGLETNPRQAYESVMGKSPP
EKLHTIWQDLQKQVNYLLSCEDQTISQGLKQIIEKKTGVIRMNMMGKRVNFAARSVITPD
PNVDIDEIGIPAAFATKLTYPVPVTEWNVDELRKMVINGPNKHPGAEKIEIKNGRVIRIP
PDSIEKRKSLAKRLLTPDEYKTAGLKIVHRHLVNGDALILNRQPSLHKPSMMAHRARILK
GEKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVIHQYLVPKDGTPLSGL
IQDHVISGVKMSIRGAFFTKADYQQLVFQALSKHKGEIKLLPPTILKPVMLWSGKQILST
IIINIIPKGKPYITLTGKAKISAKAWQKENPRPWNAGGTPFNDSNTMSEAEVIIRKGELL
SGVLDKTHYGATPYGLVHCMYELYGGVYSSALLSAFSKVFTFYLQWLGFTLGVRDILVTD
EANKKRDELICLVRQIGRVAAAKATDLPVDVDEDTLKETIGEMLTKDPKFRPNLDRQYKS
ALDSYTNKINTVCLTEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPP
LMISGRSLPSFLPYDLSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGY
LQRCLIKHLEGLAVSYDYTVRDSDGSVIQVAYGEDGLDVLKCQFLKKDQFEFLDINSNAV
VSKSTINKLKEGESTKDIVKSQKSLKKWKKKHGDPFEKVRISPFTQFSILARKDIVLDEK
PTDETRDPFYWELEKKWRSMSEEEKQEYERKKCPDPVISQYSPQYKFGVINEQLDGLIQN
YLKNRQETDNKETTGKDKFVDIMNAKYLASMAAPGEPVGLLAAQSIGEPSTQMTLNTFHF
AGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFRQNLPNLNKKAERLRQKLNRVTVAD
VLEKIDVECEIVTNPERQLKTILRFTFLPHSQYKTQYAVKPPQIIKHMKKFFPEMFIIIR
KQAKATCGVVWVTEKEKKRRKANDDDEEGEDIVPEEKETIGKDMNDDSSDEEGPNDDDDN
TEVRIRSKRAEEQEYEDPESEEEEKSDDEAIPDENQTILIDDEALEVSQNEVNPDDSRVM
SEVIGSIQNATNYTYDTKSHMWCELTVLFPISFLRVDLSQALREAATKSVIHEVKNIKRA
ITNKEKDVLYLKTEGINILQMFKYNNILDINKLYSNDIHAIANTYGIEAANKVIIKEIQN
VFNVYGITVDPRHLSLVADYMTYNGIFEPMSRKGMESSTSPLQQMSFESSLIFLKEAVLN
SKTDNIRSASSCLMMGQLCKSGTGAFSLQHSAFVN
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaataccacttttagttcaaccgtgcctgaactggcttcttttgatcttgat
tcagtacaattcctcatgttcagtgatgaagatataaagaaattaagtgtgctaaaaata
acaaacccaatttcatttgactcattgggaaatgctaccaaaggaggtctgtacgatgct
gctttaggccccgttagagacagaaatgatttttgtggtacttgttcaaatactatgcta
cactgcacaggccattttggtcatattgaactgcctttggtggttgttaatcctttattt
atcaaaaccatttatatattattccgaatcagctgcttgaagtgcttcaaaatccaaatg
gacgataaaatgaaatctatattaaaattacaattggaattgattgaggcgggccatgtc
actgctgccttagatttagagaatgttgttggtgatgttaaaagttataacagtgaaact
tctcctgataagcccaacaaacttataagaaggtgtcaaaaactattgaaaacaaaagat
ccaattaataaaactttccaaagtaaaaatagcgataagctacgaaccaaggtaatcaat
aatttcttcaaagccataaacattacaaagacttgtatgtactgcagaaacaaactgatc
aaggtgactacgtctgataataagatcatgtacaatatgacatctgatgatacgaaaggt
attaaaattttaatgccagatgaaataaaacgttactgtagtgcgattacacaaaatgat
gaagaccttctatcatattgcataccagttttgaaaaattcaaactgtaagcccagtagt
gacatatttttcatgcattcagtgcctgttctcccaccatcagttagaccatgcaatgta
ttacgcggagaactactggaacatcctcagacaaatatttataaaagtatactgaattcg
tcattcaaagcaagagctatattacaagtcctttcatcatctgatcaacagaaggccatt
gatggtcttgaaacaaatccaagacaagcatatgaaagtgttatgggcaagtcacctcct
gaaaagctacatacaatctggcaagaccttcaaaaacaagtgaattacctcctcagttgc
gaggaccaaactataagtcaaggattaaaacagattattgaaaagaaaactggtgttatt
aggatgaatatgatgggtaaaagagttaattttgcagctcgatctgttatcactcctgat
cctaatgtagacattgatgaaattggtatacctgctgcatttgccacaaaactgacttat
cccgtacctgtcactgaatggaatgttgatgaattaagaaaaatggtaataaacggccca
aacaaacaccctggtgcagaaaagattgaaattaagaatggcagagttattagaatacct
ccagattccattgaaaagagaaagagccttgctaagagacttctaactcctgatgaatat
aagactgcaggattaaagatagttcatagacatcttgttaatggtgatgcattaattttg
aaccgtcaaccatctctccacaaacccagtatgatggctcacagagcaagaatactcaaa
ggagaaaaaactcttaggttgcattacgctaactgcaaatcttacaatgccgattttgac
ggtgatgaaatgaatgcccattttcctcagaatgaaatagctagaagtgaggcttacaac
ataatgtcagtaattcatcaatatcttgtaccaaaagatggcactcccctaagtggactt
attcaagatcatgtcatttctggggtgaaaatgtcaataagaggcgcattttttacaaag
gcagactatcagcaattagtttttcaagctctatccaaacacaagggtgaaatcaaattg
ttgccgccaacaattctcaaaccggtaatgctgtggtccggtaaacaaattttatctacc
attattataaatattatacctaaaggaaaaccctacatcacattgactggaaaggctaag
attagtgcaaaagcatggcagaaggaaaatccaagaccgtggaatgcaggtggcactcca
ttcaatgattcaaacacaatgtcagaagctgaagttatcatcagaaaaggtgaacttctg
agtggagttttggataagactcattatggtgctacaccatatggcttagtccactgtatg
tatgaattgtatggaggtgtatattccagtgctttattaagtgcattttcgaaagtattt
actttttatttacagtggttgggatttacacttggtgttagagacatattagttactgat
gaagctaataaaaagcgtgacgaattaatctgcttggttcgtcaaatcggcagggttgct
gcggccaaagcaacggatctcccggtcgatgtcgacgaagacacacttaaagaaactatt
ggggagatgctaacaaaagatcctaaattcagacctaatttggatagacagtacaagagc
gcgctggattcttatactaacaaaatcaatacagtttgtttaaccgaaggtttattggag
aaatttccctacaacaatcttcaattgatggtacagtctggagcaaaaggatcaacggta
aacactatgcaaatttcatgcttgcttggacaaatcgaactggaaggaaaacgtccgcca
ttgatgatatctggacgttcccttcctagctttttaccttatgacctctctccaagagcc
ggaggatttattgatggccggtttatgacaggaatacaacctcaagaatttttctttcac
tgcatggcgggtcgtgaaggtctcattgatacagctgtaaaaactagtagatctggttac
ttacaaagatgcttgataaaacatttagaaggtctggctgtatcgtatgactacactgtc
agagattcagatggcagtgttattcaggtagcgtacggagaagatgggttagacgtttta
aaatgccaatttctcaagaaggatcaatttgagtttcttgacattaattcaaatgcagta
gtttctaaatcgactattaacaaactcaaagaaggtgaaagcactaaagatattgtcaaa
tcacaaaagtccttgaaaaaatggaaaaagaaacacggtgatccatttgaaaaagttcgg
ataagtcctttcactcagttttctattttggcaaggaaagatattgtacttgatgagaaa
cctacggacgaaacaagagatccattctattgggagctagaaaaaaaatggcgatcgatg
agtgaagaagagaagcaggagtacgaaaggaaaaagtgtcctgatccggttattagccaa
tattccccgcagtataaatttggtgtaattaatgaacaattagatggattaatacaaaac
tacttaaaaaatagacaagagacagataataaggaaaccacaggtaaagataaatttgta
gacattatgaacgctaagtatttagcatctatggcagcgccaggagagcctgtgggcttg
ttagccgcgcaatccataggagaaccatcaacacagatgacattgaatacctttcacttc
gctggaagaggtgacatgaacgttactttaggtatacctcgattgagggaaattctaatg
acggcatccgcaaaacttaaaactccgaacatggatatacctttccgtcaaaacttgcca
aacttgaataagaaagcagaacgactgagacaaaaattgaacagggttacggtagcagat
gttttagaaaaaatagatgttgaatgtgaaattgtcacgaatccagagcgacaactgaaa
actatattaagattcacgtttttaccacattcacagtacaaaactcagtacgcggtgaaa
cctccacagattatcaaacacatgaagaaatttttcccagaaatgtttattattattagg
aaacaagctaaggctacgtgcggtgtggtgtgggtaacagaaaaagaaaaaaagaggcgc
aaagcaaatgatgacgacgaagaaggcgaggatattgttccagaagaaaaagaaacgatt
ggtaaagacatgaacgacgacagctccgacgaagaaggaccgaacgatgatgatgacaat
accgaagtaagaataagaagtaagagagcagaagagcaggaatacgaggaccccgagtca
gaagaagaagaaaaatcagacgacgaagctataccggatgagaatcaaactatattaata
gacgatgaagccttagaagtgagtcagaatgaagtgaacccggatgatagcagggtgatg
agtgaagttatcggaagtatacaaaacgccacgaattatacctacgacaccaagtctcac
atgtggtgcgagctgactgttctattccctataagtttcttgcgcgtcgatctttcccag
gctctacgagaggcagccacaaagtcagttatacacgaagtaaagaatattaaaagggct
atcacgaataaagaaaaagacgtgctttacctcaagacggagggtataaacattttgcaa
atgttcaaatataataatattttagatataaacaagttgtacagcaacgatattcacgcg
atagccaacacgtatggtatagaggccgccaacaaggttataatcaaagagatccaaaat
gtgttcaatgtctatggtatcacggtggatccgagacatttgtctctggtagctgattac
atgacgtataacggaatatttgagcctatgagtaggaaaggtatggaatcgtcgacatca
ccattacagcaaatgtcttttgaatcttcgcttatattcttgaaggaagcggtgctgaac
tcgaagacggacaacattcgatcggcgtcgagctgccttatgatgggtcaactctgcaaa
agtggtaccggcgcgtttagcttgcaacacagtgcatttgttaactaa
DBGET
integrated database retrieval system
