Papilio machaon (common yellow swallowtail): 106709494
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Entry
106709494 CDS
T05138
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106709494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106709494
Spliceosome [BR:
pmac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106709494
Complex C
U5 SnRNP specific factors
106709494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_16
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
FAT
TPR_CcmH_CycH
ARM_TT21_N
NatA_aux_su
ARM_TT21
Iml2-TPR_39
TPR_21
ARM_TT21_2nd
ANAPC3
TPR_15
TPR_11
TPR_12
Motif
Other DBs
NCBI-GeneID:
106709494
NCBI-ProteinID:
XP_014356797
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MVGTRPLKRPCNTHMVEKIVDRAITSLSANGVEINREHWFKEAMEAEKSGAVHTCQAIIR
AVIGHGIDPEDQKHTWMEDAEACAHEGAYECARAIYGYALSVFPSKKSIWLRAAYLEKQH
GSRASLESLLQRAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLA
AVKLESENKEYDRARRLLAKARASAPTPRVMIKSAKLEWALNNLQEALNLLDEAIKVFSD
YAKLHMMKGQIEEQMGRDDDAHNTYSQGLKKCATSVPMWILLSRLEEKLKHVTKARSVLE
KARLRNPKNPELWLESVRLERRNGSVDIANAVMAKALQECPNAGRLWAEAIFMESRPQRK
TKSVDALKKCEHDAHVLLAVSQLFWTERKLNKCREWFNRTVKIDPDLGDAWAFFYKFELL
HGTEQQQEDVKSRCKAAEPHHGEFWCRISKDIANWCYSTEQILLLVAKDLPVPT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtactagacctctgaagagaccttgcaatactcacatggtggagaagatagta
gaccgtgcgataacgtctctcagcgcgaacggtgttgagatcaacagagaacactggttt
aaggaagcaatggaagctgaaaagtcaggagcggtccatacttgccaggctatcatacga
gcagttattggacacggaatcgatccagaggaccagaaacatacatggatggaagatgca
gaagcttgtgcgcacgaaggtgcgtacgagtgcgcacgcgcaatatacgggtacgcactg
tcagtgttcccgtcgaagaaatcaatatggctgcgcgccgcgtacctggagaagcagcat
ggcagccgcgccagcctcgagtcgctgctgcagcgcgccgtcgctcactgccccaagtca
gaggtgctctggctcatgggggccaagtctaagtggttggccggtgacgtgcccgctgcg
agaggtatattgtcgttagctttccaagccaacccaaactcggaagagatctggcttgct
gccgtcaagttggagagtgagaacaaagagtatgacagagcgagacgacttctcgctaaa
gcgagagcttccgcacctacaccaagggtaatgataaaatcggctaaattagaatgggcg
ctaaacaatttgcaagaagcgctaaatcttctggatgaagcgatcaaagtgttcagtgac
tacgccaagctgcacatgatgaaaggacagattgaagaacaaatgggcagagacgatgat
gcgcataatacttattctcaaggattaaagaaatgtgcaacaagtgtaccaatgtggatt
ttgctctcaagacttgaagagaaattaaaacacgtcacaaaggcgagatctgtactcgaa
aaagcacgtctgagaaacccaaagaacccagaattatggttggagagtgtaagactggag
aggagaaacggtagcgtggacatagctaacgcagttatggcgaaggctttacaggaatgt
cccaacgcgggccggctctgggcggaggctatattcatggagtctagacctcagaggaaa
actaagagtgtggacgcgttaaagaagtgcgagcacgacgctcacgtgctgctggctgtg
tcacagctcttctggactgagaggaagctcaacaagtgccgcgagtggtttaaccgtacg
gtaaagattgatcccgatttaggtgatgcttgggcgtttttctacaagtttgagctatta
cacggtacagagcaacagcaagaagacgtgaagagccgttgtaaagccgcggaacctcac
cacggcgagttctggtgccgcatctccaaagacatcgctaactggtgctacagcaccgaa
cagatactgctcttagtggcgaaagaccttcccgtgcctacgtag
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