Papilio machaon (common yellow swallowtail): 106710046
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Entry
106710046 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03013
Nucleocytoplasmic transport
pmac03015
mRNA surveillance pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106710046
09122 Translation
03013 Nucleocytoplasmic transport
106710046
03015 mRNA surveillance pathway
106710046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106710046
03041 Spliceosome [BR:
pmac03041
]
106710046
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106710046
Spliceosome [BR:
pmac03041
]
Common components
Common spliceosomal components
Cap binding complex
106710046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DnaG_helical
Mitoc_mL59
Motif
Other DBs
NCBI-GeneID:
106710046
NCBI-ProteinID:
XP_014357505
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MNRRRGHEEEDGYDRLHRKRRRVSENQEIEDRLESLILRVGEKSSSSLESNLEGLASVLE
ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKT
GKWNPARYCLRFISDLVNCHVLAASSLLTLLETLVDAANEDGVPQVRRDWFVFAVLSTLP
WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWAQIKK
LRQDNWSEKHIPRPYLAFDSILCEALQHTLPSIQPPPHNEGDTYPMPRVIFRMFDYTDCP
DGPVLPGAHSIERFLIEEHLHNIIEAYHLERKECAAQLLCFPYKAKIPLEYCIVEVMFAE
LFNLPVPRYLEICYGSILIELCKLQPSTMPQVLAQATEILFMRIDTMNIACFDRFVNWFA
YHLSNFQYRWSWEDWEGCIQLDPEHPKPRFIREVLGKCLRLSYHQRVKDMIPETLAPLVP
LKPEPIYKYSMEGAASLPGTEAAHRLVVCVRNKCTPEEALNVLRELPNPLRDGDAAPHPH
YNPLKIDVFVQTLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICVLKNVWELWQRQP
QMVCVLVDKMLKTQVVECSAVATWLFSKDMAPHFTHNYLWEILHLTIDKMNKHVSKLSEY
KMLNIIDRIKLSQSKLXQHTRAPLVNVKKYHKVLFGKRMKLTQTYRHIQSLTIFKAVERM
EERLELAHTDQKRLFLIVFQRFIMILSEHLVRCDTDARDPNTHWYRSTVARLRHVFLVHH
EQVQKYSSTLETLLFTQDLDPHILDVFHQFVALTA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaagacgtggacatgaagaagaagatggatatgatcgtcttcatcgaaaaagg
cgccgtgtgtcggagaaccaagaaattgaagatagattagagtctttaattctaagagtt
ggtgagaaaagtagttcaagtttagaaagcaatcttgaaggcttagcaagtgttttagaa
gctgacttgagcactttccgcgtcaagatcctgcgaatattaacagactgcgctatacgt
atgcccgaaaaatgtacaatatatgctacattggttggtttactcaatgctaaaaattat
aactttggtggtgaatttgtggattacattgtgaagacattcaaagaaaatttgaagact
ggcaagtggaatcctgcccggtactgtttacgatttatttctgatttagtaaattgtcac
gtactggccgcttcatcattactcactttgctagaaacattagttgatgctgccaatgag
gatggtgtccctcaggtcagacgagactggtttgtgtttgccgtattgtccactttacct
tgggttggcagagaactgtatgagaagaaagaatctcaattagatcatttattagtgaca
atagaagtatttctcaacaaaagaagtaagaagcactggcccgcattaaaagtatggtca
gctgattctccacatttgcaagaagaatatttagattgtctctgggctcaaattaaaaaa
ttaagacaggataattggtcagagaaacatattcccagaccttatcttgcatttgattcc
atactttgtgaagcattgcagcatactcttcctagtatacagccaccgccacacaatgag
ggtgacacataccccatgcctcgagtcatatttagaatgtttgattacaccgactgtccg
gatggtccagtattaccaggagcacattccatagagagatttcttattgaagaacatcta
cataacattattgaagcataccatttagaacgaaaggaatgtgcagcacagctactctgt
ttcccatataaagcgaagattcccttagaatattgtattgtagaggttatgtttgcggag
ttgtttaatctaccggtgccgagatatttggagatttgttacggttcaatacttattgag
ctctgtaaactgcagccgtccactatgcctcaagtactagctcaggctacagagatcttg
tttatgagaattgacacaatgaatattgcttgttttgacagatttgtaaactggtttgca
taccacttgagcaacttccagtaccgttggtcctgggaggactgggaaggctgtatccaa
ttagacccagaacatcctaaacctaggtttataagagaagttctcggaaaatgtctcagg
ttatcatatcatcaaagagttaaggatatgattccagaaacactagcaccattggtgcct
ttgaaaccagaaccaatctacaaatactctatggaaggagcagcgtctctccccggcact
gaggctgcgcaccggctcgtcgtctgcgtacgtaacaagtgtacgccggaggaggcgctg
aatgtattgcgcgagctgcccaacccgctgcgtgatggtgacgcagccccccacccccac
tacaaccccctcaagatagacgtgttcgtgcagacgctgctcaatcttggcagtaagagt
atctcccacagcttcgccgctatatcaaagtttcactacgtttttaagatattagcggaa
tccgaagaagcacagatctgtgtactaaagaacgtgtgggagctgtggcagcgacagccg
cagatggtgtgcgtgttggtggacaagatgctgaagacgcaggtggtggagtgcagcgcg
gtggccacatggctcttctccaaggacatggcgccgcacttcacacacaactatctctgg
gagatactgcatcttaccattgataagatgaacaagcatgtgtctaaacttagtgagtat
aaaatgctaaatataatagaccggatcaaactaagtcaaagtaaattataacagcacact
agggcccctcttgtcaacgtcaaaaaatatcacaaagtcctctttggaaaaagaatgaaa
ctcacacaaacatatagacatatacaaagtttaactatatttaaggctgtggagcgtatg
gaggagcgcttagagttggctcacacggaccagaagcggctgttcctgatcgtgttccag
cgcttcatcatgatcctgtccgagcacctggtgcgctgtgacactgacgcccgagacccc
aacacacactggtaccgcagcactgtcgccaggctcaggcatgtcttcctcgtgcatcac
gagcaggtgcagaagtacagcagcacgctggagacgttgctgttcacgcaggacctggac
cctcacatcctggatgtgttccaccagtttgtggcgctcaccgcctag
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