Papilio machaon (common yellow swallowtail): 106710228
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Entry
106710228 CDS
T05138
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03082
ATP-dependent chromatin remodeling
pmac03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106710228
03083 Polycomb repressive complex
106710228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmac03036
]
106710228
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106710228
Histone modification proteins
HAT complexes
HATB complex
106710228
HDAC complexes
Sin3A-HDAC complex
106710228
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106710228
PRC2.2
106710228
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106710228
Heterochromatin formation proteins
Other heterochromatin formation proteins
106710228
Chromatin remodeling factors
NuRD complex
106710228
NuRF complex
106710228
NuRF complex (fruit fly)
106710228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_WDR19_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_TEP1_C
NBCH_WD40
MIOS_WD40
YqbF
Motif
Other DBs
NCBI-GeneID:
106710228
NCBI-ProteinID:
XP_014357719
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTQQRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESGVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaaggcgatggagaaacgttcgatgacgcggttgaagagagagttataaac
gaagaatataaaatatggaaaaagaatacacctttcttatacgacctggtgatgacccat
gctctggaatggccctcgcttactgctcaatggctcccagacgtcaccaggccagaagga
aaagactattcagtacacagattgattctgggcacacatacatcagatgagcagaatcat
ctgctgattgctagcgttcagcttccaaatgaagatgcacaatttgatgcaagtcattat
gataatgacaaaggagaatttggtggtttcggttctgtgtcgggtaaaatagacatagag
atcaaaatcaaccatgaaggtgaagtgaacagggctcgctacatgcctcagaacccctgt
gtcattgcgactaagacaccatcctctgatgtcctcgtgtttgactacacaaagcatcct
tcaaagccagagccttcaggagagtgtcatcctgacctcagattgcgaggacaccaaaaa
gaaggctatggtttatcatggaaccctaatctgaatggatatctactgtctgcaagcgat
gaccacacaatttgtctgtgggacatcaacgcgactcccaaagagggccgtgttattgag
gccaagtctgtgttcacggggcacactgctgtagtcgaggatgtcgcctggcacctgctg
catgagtcactgtttggttctgtggctgatgatcagaaactaatgatctgggataccaga
tgtaacaacacgtcgaagccgtcgcacactgtggacgctcacacggcggaggtgaactgt
ctcagcttcaatccttactccgagttcatattggccacaggcagcgctgacaaaacggtg
gcgctttgggacttacgcaatctgaaactgaagctgcattcgttcgagtctcacaaggat
gagatcttccaagtacagtggtcaccgcacaacgagaccatacttgccagcagcggcact
caacaaagattgcacgtgtgggacttgtcaaagatcggtgaggagcagacggcggaggat
gctgaagatggccctccagaactgctgttcatccatggtggacacaccgccaagatatca
gacttctcctggaatcctaacgagccctgggttatttgctccgtctcagaggataatatt
atgcaggtgtggcaaatggctgagaacatttacaacgatgaggaaccagaaacgcccgcc
tctgaactagagtcgggcgtcaatgtgaaccacggctga
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