Papilio machaon (common yellow swallowtail): 106710569
Help
Entry
106710569 CDS
T05138
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03030
DNA replication
pmac03420
Nucleotide excision repair
pmac03430
Mismatch repair
pmac03440
Homologous recombination
pmac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106710569
03420 Nucleotide excision repair
106710569
03430 Mismatch repair
106710569
03440 Homologous recombination
106710569
03460 Fanconi anemia pathway
106710569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmac03000
]
106710569
03032 DNA replication proteins [BR:
pmac03032
]
106710569
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106710569
Transcription factors [BR:
pmac03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106710569
DNA replication proteins [BR:
pmac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106710569
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106710569
MMR (mismatch excision repair)
106710569
DSBR (double strand breaks repair)
HR (homologous recombination)
106710569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
106710569
NCBI-ProteinID:
XP_014358138
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSYKLSEGALEVIMNGGRYDKPVMQILGNKKIQGSGANERFRLLVSDGKHSLSFAMLATQ
LNDKLKTGELSDYSVVQVDRFITSIIKPNAEKRVMILLEITILAPGSEVGKKLGNPQTWT
EDSAHAPSQAVTPAPQANPRPAPIVKPTSNQQLDSSMLSSQMTHPIASLSPYQNKWVIKA
RVMNKSAIRTWSNARGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIEVDKVYYISRCI
LKPANKQFTSLKNDYEMTFTADTVVSECVEDASTVPSVKFDFVPISEIANRSPDSLLDMI
GVCKSAADVQELTAKSTGRLLKKREVTLVDSSGAAITLTLWGNEAEKFDGSTNPVIAAKG
ARLTEFNGSKSLSCLSSTMVRLNPDLPETHRLRGWYDNGGADCDIVNISARSGAYGGGSG
EWVTFAEAEARQLGAGERGDYFCLLGALTFTFSDNAVYKACPQEQCNKKLIDQENGLYRC
EKCNREYPNYKYRLLLGANVSDPTGDQRVTAFNEAAESILGKTAAEIGQMFEYDKAAYSQ
LFEEVKFKTFVFKFRTKMETYSDEARLKTIVMSATPVDYKDANARLVKSIKALSGVEL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaaattatctgaaggggccctggaggtcataatgaatggcggtcgttatgat
aaaccggtaatgcagatactcggcaacaaaaagatacaaggtagtggcgctaacgagaga
ttcagattattggtatcagatggcaaacattctttgagctttgctatgctcgcgacacaa
ttgaacgacaaactgaaaaccggcgaactgtcagactactctgttgtccaagtagaccgc
tttatcacttcaataataaagcctaatgctgaaaagagagttatgatattgctagaaatc
acaatcttagcacctggctcagaagttggcaagaagctgggtaatccccaaacatggacg
gaggactcggcacatgcgccatcacaagccgtgacaccagcgcctcaagcgaacccaaga
ccagctcccatcgtcaaacccacttccaaccaacagttagactcaagtatgctatcatca
cagatgacgcatcccatagcaagtcttagtccatatcaaaataaatgggtcataaaagct
cgtgtaatgaacaagtcggcaatccgcacatggagcaatgctagaggtgaaggcaaactg
ttcagtatggacttgtgtgatgacagcggggagattagagccacagcatttaaaaatgaa
tgtgataaattttacgatatgattgaggttgataaagtatactacataagcagatgtatt
ctgaagccggcaaacaaacaattcacgagtttgaagaatgattatgaaatgacatttacc
gcagacacagttgtctctgaatgtgtagaagatgcatcaacggtaccttccgtgaagttt
gatttcgtaccaatcagtgaaatagctaacaggagtcctgattcattgctagacatgatt
ggtgtatgtaagagtgcagcggatgtgcaggaattaacagctaaaagtacgggcaggtta
ctgaagaaacgagaggtgacacttgttgactcatcaggtgctgcgattactcttacattg
tggggcaatgaagctgagaagtttgatggtagtactaatccagtaatagctgctaagggt
gctcgtctaacagagttcaacggcagcaaatccttgtcttgtctctccagtacgatggtg
cgtctcaatccagatcttccggagacacatcgactgcgcggctggtatgacaatggcggt
gctgactgtgacatagtcaacatctcagccaggagtggagcatacggaggtggtagcgga
gagtgggtgacgttcgcggaggcggaggcgcggcagctgggcgcgggcgagcgcggggac
tacttctgtctgctcggagctctcaccttcacattctcagacaatgcggtgtacaaagcc
tgtccccaggagcaatgcaacaagaagctgatcgatcaagagaacggcctctaccgctgc
gagaagtgcaatcgagagtaccctaactataagtaccggctgctgctaggcgcgaatgtt
tctgacccgacgggagaccagcgtgtgacagcgttcaatgaggcagcggagagtatactc
ggtaagacggcagctgagatcggacagatgtttgagtacgacaaggccgcatacagccag
ctatttgaggaagttaagtttaaaactttcgtgttcaaattccgcaccaagatggagacc
tacagtgatgaagctcgattaaaaactatagtgatgagcgcgactcccgtcgactacaaa
gacgcgaacgcacgactcgttaaaagtatcaaagctctgagcggagtcgaattgtaa
DBGET
integrated database retrieval system
