Papilio machaon (common yellow swallowtail): 106710679
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Entry
106710679 CDS
T05138
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106710679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106710679
03036 Chromosome and associated proteins [BR:
pmac03036
]
106710679
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106710679
Coactivators
SAGA/TFTC/STAGA complex
106710679
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106710679
STAGA complex
106710679
TFTC complex
106710679
SAGA complex
106710679
SLIK complex
106710679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
VPS8_N
eIF2A
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106710679
NCBI-ProteinID:
XP_014358290
UniProt:
A0A194RGS6
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYETLNLPEVEIASILTAHHTESD
PYSYEFAYESLKKFIESSLDVYKYELSTLLYPVFVHMYLLLIIYDHNEHAAKFLEKFGPE
QEDYYQDDLAKLCIVKHKDQIKFNELAQIYSTNKFEVQLSRDVSSQLKRFLQEQKSSTVI
INIINNHIQIDVHDGPGRNQAQVRATAGGLLGEATRNENRAKVYYGLLKEPEIEVFPVPA
EDEEEAEETPDKPKKKKAKKENMYMKKPKSDPNAPPIDRIPLPELKETDKIEKVKALRAK
RVPLGPDCLPSICFYTLLNSGHSAICADICDDSTLLAVGFSNSIIKVWTLTPVRLRGMKS
ADKLQDIDKEAGDVLVRMMEERDRDTCRTLYGHSGPVYKVGFDLFKTMLLSCSEDSTIRL
WSLHVWTCLVVYRGHTWPVWDVKWSPHGHYFASCGHDRSARLWATDSYQSLRLFTGHFSD
VDCVQFHPNSNYIATGSSDRTVRMWDCLTGSQVRVMSGHKSTVFTLAFSVCGRWLVSGGT
VGDILVWDISNGSLTAALPPSHTGPIHALAFSRNGTILSSGSLDCTIKLWDFTQITEETV
NDETGSTTSVPKDEKYLLRSFATKNSPIKSLHFTRRNLLLGVGTYEGSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaatctacacctcttttagctgtcctacaattgcttcggaaatacaatcta
aaagggactgaggaaatattaagaaaggaagcaagtttaggagatgttgaatatgaaacg
ttaaatttgccagaagttgaaatagcaagtattctcactgcccatcatacggaaagtgat
ccatatagttatgagtttgcatatgaaagtcttaaaaaattcattgaaagctcactggat
gtttacaagtatgaattatcaactcttctttatccagtatttgtgcacatgtatttgcta
ctcatcatatatgatcacaatgaacatgctgccaagttcttggaaaaatttggaccggag
caggaggattattatcaagatgatttagccaagctatgtattgttaaacacaaggatcaa
atcaagttcaatgagttagctcaaatttacagtacaaacaaatttgaagttcaattgtcc
agagatgtgtcatctcagctgaaaagatttttgcaagaacagaagagttcaactgtaatt
ataaacataattaacaaccacattcagattgatgttcatgatggcccgggtaggaatcag
gcccaagtacgtgccacagctggaggtttacttggggaagctacaagaaatgagaatcgt
gctaaagtttattatggcctattaaaagagccagaaatagaagtgttcccagtaccggct
gaagatgaagaagaagccgaagaaacaccggacaaacctaagaagaagaaagccaagaaa
gaaaatatgtacatgaaaaagccaaaatctgacccaaatgctccacctattgacagaata
ccactcccagaattaaaagagactgacaaaattgagaaagtgaaagcattgcgcgccaaa
cgagtgccattaggcccagattgtctgccatctatatgtttctacacactgttgaacagc
ggtcatagtgctatctgtgcagatatctgtgatgattctactttgcttgctgttggtttt
agtaactcaataataaaggtttggacacttacacctgttagattgcgtggaatgaaatcc
gctgataaactgcaagatattgacaaagaagcaggagatgtcttagtaagaatgatggaa
gaaagagatagagatacatgtaggacactttatggtcactccggacccgtgtataaagtt
ggatttgatctattcaaaacaatgcttttatcatgttcagaagatagtacaataagactg
tggtcattgcacgtgtggacttgcctcgtggtataccgaggtcatacatggccagtttgg
gatgtgaagtggtcaccccatggccactactttgcttcatgtggccacgatcgctcagcg
agactgtgggcaacagacagttatcagtcgctacgtttatttactggtcatttttcggat
gttgattgtgtacaatttcatcccaattcaaattacatagctacaggttctagtgacaga
actgtgcggatgtgggattgtctgacaggcagtcaagtccgtgtcatgagtggacataag
tcgactgtttttactctcgccttctcggtgtgtggaaggtggctggtatcgggcggcact
gtaggcgacatacttgtgtgggacatatccaatggttctctgaccgcagcactgcctcct
tcacacactgggcctatacacgctttggccttcagtcgcaatggaactattttatcttca
ggttcattagactgtaccataaagttgtgggacttcacacaaataacagaagagacggta
aatgatgaaaccggaagtaccacctcagtgccaaaggacgaaaagtatttgttgcgttcg
tttgcaacaaaaaattcaccaataaaaagcttgcatttcactcgacgaaaccttttgctt
ggagtgggcacatatgagggtagttcataa
DBGET
integrated database retrieval system
