KEGG   Papilio machaon (common yellow swallowtail): 106710832
Entry
106710832         CDS       T05138                                 
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pmac  Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pmac04812]
    106710832
Cytoskeleton proteins [BR:pmac04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     106710832
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 eIF2A Beta-prop_SCAP Beta-prop_IP5PC_F PEP5_VPS11_N Beta-prop_NWD2_C Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 Beta-prop_VPS8 Beta-prop_WDR75_2nd PROPPIN RMC1_N
Other DBs
NCBI-GeneID: 106710832
NCBI-ProteinID: XP_014358501
LinkDB
Position
Unknown
AA seq 744 aa
MDTLRRSWKLQEFVAHKANVNCLAMGHKSNQVLATGGDDKKVNLWAIGRQSCLMSLSGHT
TPVECVCFGHSEDLVCAGSQTGALKIWDLEAAKLIRTFTGHKGAIKCMDFHPYGDYLTTG
SCDSNIKLWDTRKRGCIVTYSSHRLAVNSLQFSPDGQWIASACEDGLVKVWDVRVGKVLQ
EFVEHTSPVTCVKFHPHEFLLASCGSDKTVNFWDMEKFQLVSKFEKDNTSIRHMTFSDDG
TTLLGCGNDGLHVIGWEPARVLDTVSGHWGQIHDMTVAQTQLIAGSFHATYVVLSVVDLN
KVHPFGGPPPSVPTVVRDLSPFQKGHSVRKSFSKEKPPKEVMHRPTLLDEKTAEESASGT
EADEDSGAVISNINDYTEIFRPSRALTRTPPLQRQRAEYSRIPTPKEHYAALEKKSEVFN
TGAMDNSKDDNFCMSRKTSTANEFVAHSLTACSLNRHNSYKETKTTTEMCGNTLRQSTSE
VSLGPPSLGPRSLSFSRSSNPNTRRRVDSVSREPAPPPPRNEDPEREPEPEFIPYATDRP
VGLDLDEFLPRGLAACLGRGGARGGGAQPSEQEVLGVMMRGHDSMMAVLVARQRALQIFH
SVRVNKSLKSALESVIALEDTSVILDILNVMAHKPSLWNLDICLLMLPKIYDLLQSKYES
YMQCGCNALRLIVRNFSSVVRANVSAPVRTLGVDIPREERYAKCAQIHRLLLDVRAFLLK
RQTLQGRLGAAFRDLHTLMQQGLD
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggatactttacgaagatcatggaaacttcaagagttcgtcgctcacaaggcaaatgtc
aactgtttggcaatgggacacaaatcaaatcaagtattagcaactggtggagatgacaaa
aaagttaatctttgggctattggaagacaaagctgtttgatgagtttaagtggtcacaca
acaccagtggaatgtgtttgctttggtcattcagaagatttagtctgtgctgggtcacaa
acgggtgccttgaaaatatgggatcttgaagcagcaaaacttataagaactttcacaggt
cataagggagctattaaatgtatggactttcatccatatggagattatttgactacaggc
tcttgtgacagtaatatcaaattgtgggatacaaggaagagaggatgtattgtaacctat
tcgagccatcgccttgcagtgaatagtcttcaattcagccctgatggtcaatggattgca
tctgcttgtgaagatggtcttgtgaaagtatgggatgtgcgtgtgggtaaagttctacaa
gagtttgttgaacacacctcccctgtaacatgtgtcaagttccatccacatgagtttcta
ttggccagttgtggtagtgataagactgtaaatttttgggatatggaaaaatttcaatta
gtatcaaaatttgaaaaagacaatacttcaattagacatatgacatttagtgatgacggc
acaactttattaggttgtggcaatgacggcttgcatgtcataggctgggaacctgctcga
gtgctggatacagtgtctggtcactggggacaaatacatgacatgacagttgctcaaaca
caactcatagcaggatcattccatgcaacatatgtcgttctgtcagtggttgatctgaac
aaagtgcatccatttggtgggccgcctccgagtgttccaactgtggtcagagatttatca
ccgtttcaaaaggggcattctgttcgtaaaagtttttctaaggaaaaaccacctaaagaa
gttatgcacagaccaacacttctcgatgagaaaactgctgaggaatcagcatcaggcacg
gaagcagatgaggactcaggtgctgttatatcaaatattaatgattacactgaaattttc
cgaccctccagggcattgacacgaacaccgcccttgcagcgacagcgcgcagagtactcc
cgcatacccacacccaaggaacactatgcagcactggaaaagaaatctgaagtatttaac
acaggggcaatggataacagtaaagatgacaacttttgtatgagtaggaaaacttctaca
gccaatgaatttgttgcccattccctaacagcgtgctcactaaaccgacataactcatac
aaagaaacaaaaacaactactgagatgtgtgggaacactctccggcagagtactagtgag
gtgtcactgggccctccgtccctaggacccagatccttatccttcagcagatcttcgaat
ccaaatacacgacgtagagtcgatagtgtaagtcgcgagcccgcgcctccgccgccgcgt
aacgaagaccccgagcgggagccggagcccgagttcatcccctacgctactgacagaccc
gttggcctcgatcttgatgaatttctaccacgggggctggcggcgtgcctggggcggggc
ggggcgcggggcgggggcgcacagcccagcgagcaggaggtgctcggcgtcatgatgcga
ggacacgactccatgatggccgtgctcgtcgctcgacagagagctttgcagatattccac
tctgttagagtaaataaaagtctaaaatcggctctagaatcagtgattgcgttagaagat
acatcggtcattctggatatactcaatgtgatggcacataaaccatccctgtggaatttg
gacatatgtttgctgatgttgcctaaaatttatgacttgctgcaaagcaaatatgaatca
tatatgcaatgcggttgcaacgcgttacgtctaatagtacgcaacttttcatctgtggtg
cgcgcgaacgtgagcgctccggtgcgcacgctgggcgtcgacatcccgcgcgaggagcgc
tacgccaagtgcgcgcagatacaccggctgctgctcgacgtgcgcgcattcctgctcaag
cggcagacgttgcagggtcgtttaggtgcagccttcagggatctccacacactcatgcag
caaggactcgactga

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