Papilio machaon (common yellow swallowtail): 106711341
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Entry
106711341 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03440
Homologous recombination
pmac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106711341
03460 Fanconi anemia pathway
106711341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106711341
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106711341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
WHD_MUS81
HHH_8
DUF4364
WHD_DUF6293
EarA
HTH_27
DUF6429
Motif
Other DBs
NCBI-GeneID:
106711341
NCBI-ProteinID:
XP_014359129
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MDILEPGKRISLKRARPNPLFQSWLEELQEEAIQKKSKLENKLTVALTSLSKYPLPLQSG
AECAILQGFDKRLCMFLDKKLQKYNSFKGISLCSIDRISKENRIDPISDTLDIKYKILWD
RRIRCEIIDVAPKSSSQVRASPQNSESPSKTNCNTIYKPSYGSGGYAILLALLEQSNDEK
KQLNKETLIEHAEKYCKTSFTIKKPNTFYTAWSCMGKLITKGLVKRNKSGNKTTYSLTDE
GCSIARDLSKNAPKTSIAEDIIDVNTRPKTTMQNETDNSKDLPIDVVSANSESSSVQNSQ
IVCIELAANTFDIILLIDKQETSGLNNKNDPTVAQFKKYPNICHEYRTLKVGDYTWIAKH
RNTDQELVLPFIVERKRLDDLAASIKDGRFHEQKFRLRRCGIENVIYLIENYGGKKNVGL
PVQSLMQALANTRVNDGFKIHITKSLIHTARFLAIMTKRLAFRFQSKNLKGWNAAPEGTT
LMTFDYFNKSTVKNKPLTVTETFIKILLQLKGVSVEKALAITSKYTTPHSLISAYKVCSQ
KEENVIYLIENYGGKKNVGLPVQSLMQALANTRVNDGFKIHITKSLIHTARFLAIMTKRL
VFRFQNKNLKGWNAAPEGTILMTFDYFNKSTVKNKPLTVTETFIKILIQLKGVSVEKALA
ITSKYTTPHSLISAYKVCSQKEGEFLLANLKHGELNRNVGPTVSKTIYQLFSRTT
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctggaaccaggtaaacgaataagtttaaagcgcgcgcgtcctaaccctctg
tttcaaagctggttagaagaactgcaagaagaagctattcagaagaaaagtaaactcgaa
aataagttaacagtggctttgacttctctttctaaatatcctttaccattacaatcaggt
gccgagtgtgctatccttcaaggttttgacaagcgattatgtatgttcctagacaaaaaa
ctacaaaaatataattcatttaaaggaatatccttatgttctattgacaggataagtaaa
gaaaatagaatagaccctatttcagatacacttgatataaaatacaaaatcttatgggac
agaagaatacgatgtgaaataattgacgttgcaccaaaatctagtagccaagtaagagcc
agtccacagaattcagaaagtcccagtaaaactaattgtaacacaatttataagccatct
tatggatctggaggatatgctattctactggcattgcttgaacagtctaacgatgaaaaa
aaacaactgaacaaggaaacattgattgagcatgctgaaaaatattgcaaaacatcattt
actatcaaaaaaccaaacacattctacacagcttggtcttgtatgggtaaattgataaca
aaaggattagtcaaaagaaataaaagtggcaataaaactacatattctttaacagatgaa
ggttgttcaatagcaagagatttatcaaaaaatgctccaaaaacatcaattgcagaagat
ataattgatgtaaatacaagacctaaaactacaatgcaaaatgagactgataattcaaaa
gatctcccaatagacgttgtttcggcaaatagtgaaagctcttcagtacaaaattcgcaa
attgtttgcatagaattggcagcaaatacatttgatataattttacttattgataagcag
gagacaagtggtttaaataataaaaatgatcctacagttgcacagtttaaaaagtaccct
aatatttgtcatgaatacaggactttaaaagttggtgactatacttggatagctaaacat
cgtaatactgatcaggagttagttctaccatttattgtagagagaaagaggttagatgat
ttagcagccagtattaaagatggtaggtttcatgaacaaaaatttagattaagacgctgt
ggcatagaaaatgtaatatatctaattgaaaattatggaggtaaaaagaatgttgggttg
cctgtacagtctttaatgcaagcattagcaaatacaagggttaatgatggctttaaaatc
catataacaaaatctttgattcatacagcaagatttctggcaataatgactaaaaggctg
gcttttagatttcagagtaaaaacttaaaaggatggaatgcagcaccggagggtactaca
ttaatgacatttgattattttaataaaagtacagtcaaaaataaacctttaactgttacg
gagacatttattaaaatactgcttcagttaaaaggtgtttctgtagaaaaagctttagca
ataaccagcaaatatacaaccccacattctcttataagtgcttataaagtctgtagtcaa
aaagaagaaaatgtaatatatctaattgaaaattatggaggtaaaaagaatgttgggttg
cctgtacagtcattaatgcaagcattagcaaatacaagagttaatgatggctttaaaatc
catataacaaaatctttgattcatacagcaagatttctggcaataatgactaaaagactg
gtgtttagatttcagaataaaaacttaaaaggatggaatgcagcaccggagggtactata
ttaatgacatttgattattttaataaaagtacagttaaaaataaacctttaactgttacg
gaaacatttattaaaatactgattcagttaaaaggtgtttctgtagaaaaagctttagca
ataaccagcaaatacacaactccacattctcttataagtgcttataaagtctgtagtcaa
aaagaaggtgaatttttacttgcaaatttaaaacatggtgaattaaatagaaatgttggt
cctactgtaagtaagacaatatatcaactattttcaagaacaacttag
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