Papilio machaon (common yellow swallowtail): 106711385
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Entry
106711385 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106711385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106711385
03009 Ribosome biogenesis [BR:
pmac03009
]
106711385
03036 Chromosome and associated proteins [BR:
pmac03036
]
106711385
Enzymes [BR:
pmac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
106711385
Messenger RNA biogenesis [BR:
pmac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
106711385
Ribosome biogenesis [BR:
pmac03009
]
Eukaryotic type
90S particles
RNase
106711385
Prokaryotic type
rRNA processing factors
106711385
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
106711385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
106711385
NCBI-ProteinID:
XP_014359179
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MWYRSSPAELYYKPTPDGIGVMQTSKLEKRCNTFFKELIERGRKARPEVDELPPLRPSRG
KACKHRLDDKSSSSSDSDECMDEDGLQGYSDRIMMELQRKQSHPRRLHPEMWFNNTGEMN
GGPLCRCSARARRYGMRHGVYAGEETYPKCIPTESNIDKLYHYRITVSPPTNFLIKAPTI
IAHDEHEFLFSGFSMFSHYKLAKLPTCKVIRFNIEYTILYVEEPAPQNFSIQELDLFEEY
LFYELLELVDLDLGKATETTCSQFHFMPRFVRYLPEGGCEVLSMCEVLKYLIDESGLLIP
PDTLEEVHSMDHYKWQKFVDRIKGMIVTYPGKKPCSVRVDQLDRSPPVSKEMKDPNAVKK
YYPEIVHFGIRPPQLSYAGNPEYQKAWRYYVKYRHLIANMAKPSYKERQKLAAKEAKLQE
MRTQTKMKRDVTVAISSEGFHTTGLMCDVVQHAMLIPVLVRHLRFHKSLDSLEKKIGYVF
KKRLLLQTAFTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYTRKKGIVTLINIM
SRFGKRSETESEIKHNERLEFLGDAVVEFLSSIHLFRMFPGLAEGGLATYRASIVQNQHL
AQLAKNIELEQYMLYAHGSDLCRELVMRHAMANCFEALMGALFLDAGLEVTDRVFAMALW
HGAPALLDVWNKERLHPLQEQEPLGDRKYIKDFEFLQKLTEFEDSIGVQFKHIRLLARAF
TDRSVGFTHLTLGSNQRLEFLGDTVLQLVVSDRLYRHFPDHHEGHLSVTTTLPQPQPLXH
YLLYYNTSFCPRLCPHGILKKNLISYICIVLDYNLDYCQAFCNACLFPRLQEFILNQDWN
DPKSKLQQCCLTLRSMEGGEPDIPLYKVIECLGPTNTRVYSVGVYFRGTRLAAARGHSIQ
EAEMNAAELALNSAHGNLTLVTFYTLIYHT
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtggtaccgaagttcaccagctgagctgtactacaaaccaacaccagatggcataggt
gtgatgcaaacaagtaaactagagaaacgctgcaatacattctttaaggaattaattgaa
agaggaaggaaggcaagacctgaagtggatgaattgcctccattaaggccatcccgaggg
aaggcttgtaaacatagattggatgacaaaagttcatcatcatcagacagtgatgaatgt
atggatgaagatggtttacagggctattctgatagaattatgatggagctccagaggaaa
cagagccacccaagacgccttcatcctgaaatgtggtttaacaacacaggtgagatgaat
ggcggaccgctatgtcggtgcagtgcgcgcgcgagacgctacggcatgaggcacggtgta
tacgccggagaggagacataccccaaatgtatacctactgagagtaacattgacaaactg
taccattatagaataacagtgtccccaccaacaaacttcttgatcaaggccccaacgatc
atagcacatgatgaacacgagtttctcttctctgggttttcaatgttctctcactacaag
ctcgcaaagttacctacgtgcaaagtgataaggttcaatattgaatacaccatattatat
gtggaggaaccagcgcctcagaacttctcaatacaggaattggatctatttgaggaatat
ctgttctacgagttgttagaactagtggacttggatcttggtaaagcgactgaaacaaca
tgttcccagtttcatttcatgccacggtttgtaaggtacttaccagagggaggatgtgag
gttttatcgatgtgtgaagtactaaaatatttaatagatgagagtggtctgctgatacca
cccgacacattggaagaggtccacagcatggatcattacaaatggcagaaatttgttgac
aggattaaaggaatgattgtgacgtatccgggtaagaagccatgttcagtgcgcgtggac
cagctggaccgcagtcccccggtcagtaaggagatgaaagatcccaacgcagtcaagaag
tactatcctgaaatagtacacttcggtatccgaccgccgcaactcagctatgccggaaac
cctgaatatcaaaaggcgtggcgttattacgtaaagtacagacatctgatcgccaacatg
gccaagccgtcgtacaaggagcggcagaagttggccgccaaggaggccaagctgcaggag
atgcgcacgcagacaaagatgaagcgagatgtcaccgtcgccatctcctctgagggattt
cataccaccggccttatgtgtgatgtcgtacaacatgcgatgctaatcccagttctagtt
agacatcttcgcttccataaatctttggatagtttggagaagaagataggttacgtgttc
aagaagcgattactgctgcagactgcgttcacacatccttcatacagagagaactttggc
accaatcctgatcatgcgaggaacagtctcactaattgtggcatacgacagcccgagtat
ggagataggagaatacattatacaaggaaaaagggtatcgtgacattaataaacataatg
tcccgcttcggcaagcgcagcgagaccgagtccgagatcaagcacaacgagcggctggag
ttcctcggagatgcggttgtggagttcctctcctccatacatctgttccgaatgttcccc
ggactggcggagggaggactggctacatacagagcctccattgtacagaatcaacatctg
gcgcaattggccaagaacatagagctggagcagtacatgctgtacgcgcacggctcagac
ctgtgtcgcgagctggtgatgagacacgcgatggccaactgcttcgaggccctcatgggc
gcgctcttcctcgacgccggacttgaggtgacagaccgcgtgttcgcgatggcgctgtgg
cacggcgcgcccgcgctgctggatgtgtggaacaaggagcgtctgcacccgctgcaggaa
caggagccgctcggggacaggaagtacatcaaggacttcgagttcctccagaagttgacc
gagtttgaagactctattggtgtacaatttaaacacatccgtctgttggcgcgcgcgttc
acggaccgctctgtggggttcacacacctgacgctgggctccaaccagcgcctggagttc
ctcggagacaccgtgctgcagctcgtcgtctccgacaggctctaccggcacttccccgac
caccacgagggacatctctcggtaacaacaacactgccacaaccgcaacctttataacat
tatttgctttattataatactagcttttgcccgcgactttgtccgcacggaattttaaaa
aaaaacttaattagttatatatgtattgtactagactataatctagactactgccaggcg
ttctgcaacgcgtgcctgttcccgcggctgcaggagttcatcctgaaccaggactggaac
gaccccaagtccaagctgcagcagtgctgcctcacgctgcgctccatggagggaggagag
ccggatatacccttgtataaggtgatcgagtgcttggggccgacgaacactcgcgtgtac
tcagtgggtgtgtacttccgcggcaccagacttgcggcggcgcgcggacattccatacag
gaggcggagatgaacgccgcagagctcgcgctcaactccgcacacggtaacctcacactt
gttacattttacactctcatatatcatacataa
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