Papilio machaon (common yellow swallowtail): 106712246
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Entry
106712246 CDS
T05138
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmac01002
]
106712246
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmac04121
]
106712246
Enzymes [BR:
pmac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106712246
Peptidases and inhibitors [BR:
pmac01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106712246
Ubiquitin system [BR:
pmac04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106712246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
LPD11
YdjC
Motif
Other DBs
NCBI-GeneID:
106712246
NCBI-ProteinID:
XP_014360226
LinkDB
All DBs
Position
Unknown
AA seq
2413 aa
AA seq
DB search
MTISMKEQEEMPGEMAFPEAQLKALEEKITHPRWVVPVLPEQELETLVLAATELAINGED
INNPYCQRFYNDALTLAFTKILTDDAVASWKSNIQQCVRSNCEKLVKLCAMKLDDPRFLH
LLSMAFNPSNKFHTFNVSRTCEGLAVTNICNLGQGSGQEPEIFARSQDHRAPRGWLVHLI
NVFGQAGGFEKLRDRFESIMGYQKSELTMSVNYDEKVIKETQEYEENNKVDVTETLPLTS
EITESTISSKSEPFSSLEQSMNVETRVAAVWQLLRPFSLCYDLLTPHTVTAYLLPIIECI
PTMLESLTDDELKREGRASENKTDSVSCLIKTCKCLLMKIPQHHGLLKSLEMFRLKMILR
LLQMSSFNGKMSALNEINQLISTISQQPKPEWLTPTVITNWIRENKVVDIVLRDSLHQPQ
YVERLEKMLRFLIKENALTNEDLDAIWRAQLGKHEAIVKNLHDLLAKLAWDFTPDQLDHL
FDCFKASWATSSKKQSEKLLEVIRRLAEDDKDGVMANKVLVLFWNLAHSDEVCTEIMDVA
LVNLNKILDYSCSQDRDAQKTLWIDKCVEELKNNEKWVLPALKMMREICCLYESGGGTGV
RPHVTRQELIDRLQTQHSLVILVADSLTHYLDRVRKKLREEGSIDWDNWLPDGRYPHAAQ
VHERLGFLRFLLKDGQLWLCAEQAKQIWTCLAEKPAHLGDREACFRWFSKLMGEEPDLDP
NINLHFFRRNIMTLPPNVLTHAGIKCFERFFKAVNSKEGKIKIKRRSFLINDADLIGLDY
LWRVITECEDDISNRGIELLREVCTYAGPQLSPAHHHESFLTQCCARTQRLQKEMNSQQD
DTEICTKMCRVLRAIQEYINECDRRFSADRQIIPIYRSGRGRQCTVIIRFNFQTGQRQID
DIELLSHSNETIHTIRSAVQRRVKCSADSNMKLEMYVNKIELYVNGEILDSSHDRKILSQ
IPLRDKSVIVAKVYDGQVCGSGGCGSSNESSSDSSTSSPPSTPTPEHALPGVLFAQGSWY
LPFILDLEHIGITKNHAQLTEAAHLLTQICPAHKQTVEKLTEALLCRDDSKLRDMLYGPA
PPTVAYNMQVLHSMVLPSTESRLERSRSFQLACVKKAPLLVLSLSDQDFLDGAASHTRRV
GYLALVRLVKLVLYTLGHLFELLAPDGSDLTIDPDFRMDVTILREALQTVSNHNCELIVK
AIAEKLSNMLGQQYKHQVVANRDEGDSVTSLVWWRVPTAATVRALYTLAYCVAQPIDVIG
AVHPDDVTLVRECMEVVTICMALAGGHLETYLHDAWWQDSVLYLMIDCPNAQVRVSCAEQ
LLAMCAWGGGGGARGTLSVLSAGGMCGARLQRYARHAQQFLQLMCRLVSLAGPTARTRED
LAHEVNWLRTMRANPELLDDTLLEGHLNLTKELFNHVPTQVKFQYGAHPDHRDAGLIKEV
MTEFLWPYSWAWCQMGDVESEGDGDGPCEPAPPLCRTPGAAAAAADLLLALVHGCVPNMS
AVAQLLEMMFYCDKNIPLSEWEYMPCVGPRPPSGLVGLKNAGATCYMNSVLQQLYCVRAV
RDFLLTVQGAATDPNEDFSGDLQHHSLMENNTENSGDYNITILKQVQAIFAHLQYSKLQF
YVPRGLWAHFKLQGEPVNLREQQDAVEFFMSLVESLDEALKTLGQEQLMAKTMGGTYSDQ
KICKGCPHRYCKEEPFSVVSLDIRNMSRLQESLEAYVRGELLEGADAYYCDKCSKKVVTV
KRLCLNKLPPVLVIQLKRFEYDFEKVCAIKFNDYFEFPRELDVEPYTAWGLARAEGDTTL
WDGGEEQTPETHYQLSGIVVHSGQASGGHYYSYVLLRDNGSASGRWVKMDDGDVSECGMH
DDEEMKAQCFGGEYMSEVFDSAVKRVSYKRQKRWWNAYMLFYTRKDTIETPTLEQSMKSM
TLKETALPKPIWQSVRRSNIAFCHNQDQFSLEHFNFMKKLCCMRLQVLPGSQSAVWGQEH
EEMSMLAVQLATKFLFQVGFHTKKTLRGPASDWHDILCQHLRCSQTVRTWFAGDLFKHPH
RLCDYLLSCPSVEVRLVFMKILVFLAHFSIQDPPVGGGWGSWTTPDEAGSLSDQVLCAVR
ALAAPQHADSHQHRHLPLLYNLYHAYAVLGYNEKQQLLRLKILDVVLTLCMDDSGVSTGK
HQYPESAKVHQVVCVLVRCCDVSMRCQSLNAGEEPLPNPYSEPLPAHHAHAVRPPLSPVV
AEVLYNRTGTYMKKLTEECCGCEEGVRLLQFLCWENAGWSRVALNELLWQMAYAYCHELR
RHTEALSALLLLEDSWQQIRIQNAIKGISEERPGLLETAIRARGHYQKRAYACLKLVVSV
MCRAPAAVRAVHGHIEARRRWRQLLAWLQDELDRFGPGGYGSYGTWSPPGTSNETSSGYF
LERSNSARKTLEK
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttcaatgaaagaacaagaagaaatgcccggggagatggcattccccgaggct
caacttaaagcactagaagaaaaaataacacatccacgttgggttgtaccagttttgcct
gaacaagaattagaaacacttgtcttggctgccactgagctggctatcaatggtgaagat
ataaataatccttactgtcagagattttataatgatgctcttacactagcctttactaag
atcctaacagatgatgcggtggcttcttggaaaagtaatatacaacagtgtgtcagatca
aattgtgaaaaactagtgaagctatgtgccatgaaattagatgatccaagatttctacat
ttattgtctatggccttcaatccaagtaacaaatttcacacatttaatgtgtctcggacc
tgtgaaggtttggcagttacaaacatttgcaatttggggcaaggctctggtcaggaacca
gaaatttttgcaagatcgcaagatcaccgtgcccctcgtggatggctggtccatcttatt
aatgtctttggtcaagctggtggttttgagaaactgcgagatagatttgaatctataatg
gggtaccaaaagtctgaattaacaatgtctgtaaattatgatgaaaaagttataaaagaa
acacaagaatatgaagaaaataataaggtagatgttacagaaactttgccgttaacttca
gaaattacagagagtacaatatcttctaaaagtgaaccattttcatcactggaacagtca
atgaatgtggagactcgagtggctgctgtgtggcaactgctgcgacctttcagtctatgt
tatgacttactgacaccacatactgttactgcttatctcttacccatcattgaatgcata
cctacaatgttggaaagtcttactgatgatgaactgaaaagggaaggcagagcttctgaa
aataaaacagatagtgtctcctgtctaattaaaacttgcaaatgtctactgatgaaaata
ccacaacatcatggcttgttaaagtcattagaaatgttcagactgaaaatgatcttgaga
ttacttcaaatgtcatcatttaacggaaagatgtcagcactgaatgaaattaatcaactt
ataagtacaatatcacagcagccaaaaccagaatggcttacaccaacagttatcaccaat
tggattcgagagaacaaagtagtagacatagttttgcgtgattcactacatcagcctcag
tatgtagagagattagaaaaaatgttaagatttttgataaaagaaaatgctttaacaaac
gaagacttagatgcaatatggcgggcgcagcttggaaaacatgaagctattgtaaagaac
ctacatgatcttctagcaaaactggcgtgggactttactcctgatcaattggatcatctt
tttgactgttttaaggcaagttgggcaacatcaagtaagaaacaaagtgaaaagctttta
gaagttataagaagactagcagaagatgataaagatggtgtaatggcaaacaaggtatta
gtacttttttggaacctagctcactctgatgaagtgtgcaccgagataatggatgtggcc
ttggttaaccttaacaagatattggattacagttgtagtcaggaccgggatgcacagaag
actctttggattgataaatgtgtagaagagttaaagaataatgagaaatgggttttaccg
gcgttgaagatgatgcgcgagatatgttgcctgtacgaatctggcggcggcacgggcgtg
aggccgcacgttacgcgccaggagctcatcgaccgcctgcagacgcagcactctctcgtt
atacttgtcgcagactcccttacacattacttggatcgcgtgcgaaagaaacttcgagag
gagggatccattgactgggataattggctacccgacggcaggtatcctcatgcggcacaa
gttcacgaacgactgggctttcttagatttttacttaaagatggacagctttggttatgc
gctgaacaggccaagcaaatatggacatgccttgcagaaaagccagcacatcttggagat
cgggaggcatgttttagatggtttagcaaactgatgggagaagaacctgatctagatcca
aatattaatctacatttttttagaaggaatataatgacattgcctcccaatgtattaact
catgcgggtataaaatgttttgaaagattttttaaagctgttaattccaaagaaggaaaa
ataaaaattaagcgacgtagttttttaattaatgacgctgatctcataggcttagattac
ttatggagggtgataacggaatgcgaggacgatatatcgaaccgaggcatcgagttgttg
cgcgaggtgtgcacttacgcgggcccgcagctgtcgccggcgcaccaccacgagtccttc
ctcacgcagtgctgcgcccgcacgcaacgcctgcagaaggagatgaactcgcaacaggat
gatactgaaatttgtacaaaaatgtgtagagtacttcgtgccatacaagaatatataaac
gaatgtgatagaagattctctgccgacagacaaataataccaatctacaggtcgggcaga
ggtcgccagtgcactgttattatcagattcaattttcaaactggtcaaagacaaattgac
gacattgagctgctttcacattctaatgaaacaatacacactataaggtctgctgtacaa
agaagggtaaaatgttctgcagatagtaatatgaaattagaaatgtatgttaataaaata
gaattatatgtcaatggtgagatattagattcatctcatgacagaaaaatcttatcacaa
ataccactaagagacaagtcagtaattgtagccaaggtgtatgatgggcaagtatgcgga
agtggtggatgcggttcttcgaatgaatcaagcagcgattccagtacatcatcaccacca
tcaacgcctactccagaacacgcgcttcctggtgtcttgttcgcacaaggatcctggtac
ctgccgtttatattagatttagaacatattggcatcacaaaaaatcatgcacaattaaca
gaagctgcacatcttctgacccaaatatgccctgcgcacaagcaaactgttgagaaactt
acagaagcccttctttgccgtgatgattccaagttaagggatatgttgtatggaccagct
ccacctacagtagcttataacatgcaggtactacatagtatggtgttaccatcgacagag
tctagacttgagcgtagtcgcagttttcagttagcctgcgtgaagaaggcgccattattg
gtgctcagtctctctgatcaggattttctagatggagctgcatctcatacaagaagggtt
ggttacttagcattagtaagattagtaaagttggtactctatacattgggacaccttttt
gaattgttagcacccgatggatcagatcttaccatagacccagacttcagaatggatgtt
acaattttgcgggaagctctacagactgtatcaaatcataattgtgaattgattgtaaaa
gccatagctgaaaaactatcgaacatgttgggtcaacagtacaaacatcaggtggtagca
aaccgcgacgagggcgactcggtgacgtcactggtttggtggcgcgtgcccaccgccgcc
accgtgcgcgcgctctacaccctcgcctactgcgtcgcgcagcccattgacgtcatcggc
gccgtacaccctgacgacgtcactttggttcgagagtgcatggaggtggtcactatttgc
atggcattggcaggggggcatctggagacgtacctacacgacgcctggtggcaagacagt
gtactctatctcatgattgattgccccaatgctcaggtacgtgtgtcgtgcgcggagcaa
ctactggcgatgtgcgcatggggcggcgggggcggggcgcgcggcacactgagcgtactc
agcgctggcggcatgtgcggcgcgcgtctgcagcggtacgcgcggcacgcccagcagttt
ctgcagctaatgtgccgcctcgtctcgctggccggacccacagcgcgcacaagagaagat
ctggcgcatgaggtcaattggttacgaacgatgcgcgctaatccggaattgctcgacgac
actcttttagaaggacatcttaatttaaccaaagagctgttcaaccatgtgccaacccaa
gtgaaattccagtacggcgctcacccggatcatagagatgctggacttataaaggaggtg
atgacggagttcctgtggccctactcgtgggcgtggtgccaaatgggagacgtggagagt
gagggggacggcgatggaccgtgcgagcccgcaccaccgctctgccgtacgccaggcgcc
gccgccgccgccgccgacctactgctggcgctcgtgcacggctgcgtgcccaatatgtcg
gccgtcgcacaactactcgaaatgatgttttattgtgataagaacatcccactgtctgag
tgggagtacatgccgtgcgtgggtccgcggccgccgtcggggctggtggggttgaagaac
gcgggagccacgtgctacatgaactccgtgctgcagcagctgtactgcgtgcgcgccgtg
agggactttctgctcaccgtgcaaggagctgctacagatccgaatgaagatttttctgga
gatttacaacatcacagtctgatggaaaataatactgagaattcgggcgattataacata
acaattttaaaacaagtacaagctatatttgcacatttacaatatagcaaattgcagttt
tatgtacccaggggtctctgggcccatttcaaacttcaaggtgagccggttaacttacgc
gagcaacaagacgcggttgaattctttatgtctcttgtggaatcactcgatgaagctttg
aaaacgttaggacaagagcaattaatggctaaaactatgggaggaacatattccgaccag
aaaatctgcaaaggctgtcctcacagatattgcaaagaggaaccatttagcgttgtttct
ttggacatcagaaatatgtctcgcttacaggaatctctcgaagcttacgttcgcggggaa
ttactagaaggtgctgatgcctattattgtgataaatgtagtaaaaaggtggtaacagtg
aagaggctgtgtctaaacaagctgcctccagtgttagttatacagctcaaaaggttcgaa
tacgattttgagaaagtgtgtgcaatcaaattcaatgactattttgagttcccgcgagaa
ctggacgtcgagccttacacagcatggggcctggcgcgggcggagggggacacgacgctg
tgggacggcggcgaggagcagacgcccgagacgcactaccagctcagcggcatcgtggtg
cactcgggacaggcctccggcggtcattactactcatatgttttactacgcgacaatggc
agcgcgagcgggcggtgggtgaagatggacgacggcgatgtgtccgagtgcggcatgcac
gacgatgaggaaatgaaggcgcagtgcttcggcggcgagtacatgagcgaagtgtttgat
tcggcagtaaagcgggtgtcatacaagagacaaaagagatggtggaatgcttacatgtta
ttctataccaggaaggacactattgaaacgcccactctagaacaatctatgaaaagtatg
acgctcaaagaaactgctcttccgaaaccgatttggcagtcagtacgccgcagtaacatc
gcattctgtcacaatcaagaccagtttagtttggaacatttcaattttatgaagaaactg
tgctgcatgcgccttcaagtactgccagggtcacagagtgctgtatggggtcaagaacac
gaagagatgtcgatgttggctgtgcagttggctacgaaattccttttccaagtcggattt
catacaaagaaaaccttgcggggtccagcttcagactggcatgacattttgtgccaacac
ttgcgatgttcccaaactgttcgcacgtggttcgctggggatctcttcaaacatccccac
aggttatgcgactatttactgtcgtgtccctctgtcgaagtacgtctggtgttcatgaag
attttggtatttctggcacacttctcaattcaagatccaccagttggtggcgggtggggg
tcgtggactacgccggacgaggcgggctcgctgtccgaccaggtgctatgcgcggtgcgc
gcgctggcggcgccgcagcacgcggactcgcaccagcaccgtcacctgccgctgctctac
aatctctaccatgcgtacgccgtgctcggctacaacgagaagcagcaattactgcgctta
aaaatactagatgtcgtgttaacgctctgtatggatgacagcggtgtttcgaccggaaag
catcaatacccagaatcggcgaaagtacatcaggtggtgtgcgtgctggtgaggtgctgc
gacgtgagcatgcgctgtcagtcgctgaacgccggcgaggagcctctgcccaacccttac
tcggagccgctacccgcacaccacgcccacgccgtgcggcccccgctatcacccgtcgtc
gctgaagtgctctacaacagaactggtacgtacatgaagaagctgactgaagagtgctgc
ggctgtgaggagggcgtgcgcctgctgcagttcctttgctgggagaacgcagggtggtcg
cgggtcgcgcttaacgagctgctgtggcagatggcgtacgcctactgccacgagctgcgc
cgccacaccgaagccctttccgctttgctgctgctggaggacagctggcagcagattcgc
atacagaatgcaattaagggaatttcggaggagcggccgggtctgctggagacggcgata
cgcgcgcgcgggcactaccagaagcgcgcgtacgcgtgcttgaagctggtggtgagcgtg
atgtgccgcgccccggccgccgtgcgcgccgtgcacggccacatcgaggcgcgccgccgc
tggcgacagctgctcgcctggttgcaggacgagctcgatcgcttcggacccggcggttac
ggttcctacggcacttggtcaccgcccggaacgtctaacgaaacatccagcggctacttc
ctagagcggagtaactcggcgcgaaaaacgcttgaaaagtaa
DBGET
integrated database retrieval system
