Papilio machaon (common yellow swallowtail): 106712254
Help
Entry
106712254 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106712254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmac04121
]
106712254
Enzymes [BR:
pmac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106712254
Ubiquitin system [BR:
pmac04121
]
Ubiquitin ligases (E3)
HECT type E3
106712254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
106712254
NCBI-ProteinID:
XP_014360234
LinkDB
All DBs
Position
Unknown
AA seq
2906 aa
AA seq
DB search
MSSMHFVVHPLPGTEDQLIDRLKEVSERWNRYGTGAGSSALSTLRGVRAVTAGPAHIACL
LDDGTICRAAFSIIPDRLDLSKADASKNGGNGGGGSGGGGTSGGKQGGSSGGCGSRQQPR
TRARIMRNSIRAAPSSQGSTSRATGVIIGASSSGRVVSVPAPFVPEDLVTQAQVVLQGKS
RSLIIRELQRTNLDVNLAVNNLLSRDDEEGEEPEGGEGGDGYVPEDLISLLDSGFHATQQ
DHSVIIDADAMFSEDIFGYATIRSRNGGGGSGSGGGRAGASREGSSSTQERPSEFSRWRD
RQYFGPRRWLESALRDTSWDKDGVDNKKKDSAMSASPLWVSEELEYWDSNIRFTHIAATY
SELIAVSSLGQLHQWRWADAHPYQRNDCSSSNSLYHPRGNWLGMMSGERIVNISAAGIRV
SVLNDTGRIATFLDESIAHAPGAARLEHPLQTFTEFGSDKAVSLHACSLYTVAKLDSGAL
YWWGVLPLGQRARLWEKHRARSRKQQRGHSSATPQDLQAGQNVTMKNAPMYQPGAIGFNM
SSGVPKVGVLQNAAWNLSDMCRFKLLPPPQLDRSISDKDKRDIQNQSPLTVSSVKASSSG
GSGKDSGKDSNKDMADRLDMPPPPSPASSTCSDTSTSHKRAKRVTVRGEEGSSNDGSKRD
EEEWPLKEVVFLEDVKSVPLGRVLKVDGAYAAVRFPTMGKDGKEVLPSTTDDWTTVLQDC
RLVRKDDLVAVKWGAGSGSGSRGPDCLQRSPRKVALPPELQVITIAVDSRGVHAVVKRPG
GALAYAVYAVGATRALTDSVFPTDHEALLGHTNGAGIQLATAAEGSEAVVVMADGNGALY
PIARDCVGMVREPPPLNLPPARALTAHALPLQPHGAAHSHHAALKSQVALIIIVPEPQLM
MPRVLRCDLEGVRQLLHLLEADNNKQQILSILQERCDGNRNILHACVHMCAPTSNKEPDI
VENSSMPNVASGTSGSGNNTDEAVPAISWPPETFEASGDEDSLMGLTNNSKISNGGANGG
GAVSADPAERRGNALAALRALCESPVLQPYLMQLLLAKDGMGQTPLMAAVAERAYRAALV
LLDAIRSCPEADEAQRSDAIFPPNAHPDHSPLLVLCCNDTCSFTWTGQEHINQDIFECKT
CGLTGSLCCCTECAKVCHKGHDCKLKRTSPTAYCDCWEKCRCKALVGGNWAARCDLLARL
ARDTQLATHFNSRGESILLFLVQTVGRQAVEQRQFRAGDGRGRAPRKQPGSDAEVDTPDH
DLEPPRFARRALLHLLGDWAAVEAAVMCGATASEPEGRPGSPSLNQSGTTLLDKFTHALI
VKCTNEMLDTLLHTLMREQQNEAVPGRAERAREVARRFVRSVARIFVIFSVEMAPGAAKK
RGPLSITSSLVRCRRVFAALVALAVEELVEAADALLAPVRLGVVRPTAPFPLATTYVDLV
NGSEDLFGVEPLSTGHTRLGHSRRESNTGGGRGAAAGGASMGGSALAPDRASTPVATEYA
DDVAEAPSLGGDDDASETDEPAMAAADPTPDAQHDDAMGERGQEQHVVVENGTERAEGGE
SESELDLLAEVETESDSDDQDNAESAQRSVQTRATQGSDAGIASLLMYPEDESGDSTQPE
DEDSEAGETDEQDGEAEPPLHDGEPLERRAAPPARPNLAPHSMQWAIRSREPTRGTTSSA
GGVRLTGSSSLVFIDPASLRRSAAAAAAGAHDPHSTSTTASFLARAFGIVIRQIADLLWE
YERITLPLPRLVPLAYREALRLQCYLERQLKPTWDWLVTVMDATEAQLRFGASLTSNNAG
SAAAEHSRTNATTTRRTTSFTSPATRIIGFSEGPRGRDRDQGVEAGSARREFLAYCLSLL
RAHSAEHAEQLPVLDVAALKHVAYVLDALIYYMRAAQPQPHHHPHLWTADENENEEGDEE
MVVGGGGTNESDGEGDGARGRTHAFFQRSDSTLCLGCPPPDPFNMTMQDALPLADQPQLL
QPNARREDLFGMPRQPVTLPPADDANTGAANPLEVMCLLKVVPRRLGLSSRGAERGWSPP
ARPASAPPAHTHTMALLKVMCLLKVVPRRLGLSSRGAERGWSPPARPASAPPAHTHTMAR
DEPQDLSCAKDTVTKMDTGSDGEYPSDSDSDEARQIQRKKHHRHPHASTSGSSSRQDRQE
AAPPSEFHTLVDTACSIIDAPHQQNIALPKPGVSGSVHEPRPSTSRSPGKTVIVRAGELL
SVADPLESQEISAHVTVETTGLTTAPLLPTQVLNAPAQARTCPSLGATVSHDLLLGRWRL
SLDLFGRVFTEDVGLEPGSVVAELGGFPVKEVKFRRDMEKLRNSQQKDLTLHKMERDRAK
LLQQTFAELNSAFAGQNRRAHSAQPPLAVNRVKVTFRDEPGEGSGVARSFYTSVAEALLA
NEKLPPLESTSGSGVNSNASNGTSGSSGANAGASANTGTRSSGAGRARAKDTARRVPGRA
APRPPTAREPRRVLSVDARPYSPQAAPGTEGAGYSGDRPGGHNEHLTLHQAQLGERLYPR
VHSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMNPSEAILDLDVFS
LSERGGGVGGGGGAALGAGSSAAAADDAAPLFYSPGKRGYYSPRQGRATSERINAFRNVG
RIIGLCLLQNELCPMFLNRHVLKYILARPIRFHDLAFFDPVVYESLRQLVADAENGDSHS
LFAALDLNFSLEMCEEEGGGCVELVPGGREIEVTALNVYDYVRKYAQHRMLHSQEKALES
IRVGVLDVLPESSLEGLTAEDLRLLLNGVGDINVAALVSYTSFNDESGEPPERLVRFKRW
LWAIVDKMTHLERQDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLY
IPLYSSRHVLKHKLLLAIKTKNFGFV
NT seq
8721 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctatgcattttgtggttcatcctttgcctgggacagaggatcaattgatagac
agattaaaagaggtttctgagcgctggaaccgatatgggacaggggctggatcgtcagcg
ctcagcacactgcgtggtgtgcgagccgtgaccgccggccccgcccacatcgcttgccta
cttgacgacggcacgatatgccgcgccgcattctccatcatccccgacaggctcgacttg
agcaaagcggacgccagcaagaacggtgggaatggaggtggaggaagtgggggaggtggg
actagtggggggaaacaaggcggcagcagtggcggctgcggctctagacaacagccgcgg
actagggctcgcatcatgagaaactcaattcgtgctgcacccagttcacaagggtcaacg
agtcgtgccactggtgtaattataggcgcatctagctccgggcgagtcgtgtccgttccg
gcgccttttgtaccggaggatttggtaacacaggctcaagttgtacttcaaggaaaaagt
cgcagtctcattatacgagaattgcagcgtacaaacctggacgtgaacctagccgtaaac
aacttgctgtcccgcgacgatgaggagggcgaggagccagagggtggcgagggcggcgac
ggctacgtgccagaggacctcatctcgctgctcgacagcggcttccacgccacgcagcag
gaccattccgtcataatcgacgccgatgcgatgttctccgaggacatcttcgggtacgcg
actatcagaagtcgtaacgggggcggcggcagtggcagtggtggtggacgcgcgggcgcc
agccgcgagggcagtagctccacgcaggagcggccctcggagttcagcaggtggcgcgat
cgtcagtacttcggcccaaggaggtggctcgaatccgctctgagagatacatcgtgggat
aaagatggagttgacaacaagaaaaaagattctgcaatgagcgcgtcgccgctgtgggtg
tccgaggaactggagtactgggacagcaatatccgcttcacgcacattgcggccacctac
agtgagctcatcgcagtctccagcctcggccagctgcaccagtggcgctgggctgacgcg
catccttaccagcgcaatgactgctcgagttctaacagtctgtaccacccgcgcggcaac
tggctcggcatgatgtcgggagagcgtatcgtcaacatcagcgccgctggcattcgagtt
tccgtgctcaatgacacaggcagaattgccaccttcctcgatgagtctattgctcacgca
ccgggcgccgctcgcttggagcatcctctgcaaacgttcacggagtttggcagtgacaag
gctgtgtctctgcacgcctgctcgctctatactgtggccaaactggactctggagctctc
tactggtggggcgtgcttccactgggccagcgcgcccgcctgtgggagaagcaccgcgcg
aggtcccgcaagcagcagcgcggccactcgtccgcgacgccgcaagacctgcaggctgga
caaaacgtcaccatgaagaacgcgcccatgtaccagcccggcgctataggtttcaacatg
tcttcgggtgtgccgaaagtgggcgtgttgcaaaatgcggcctggaacctatctgatatg
tgccgcttcaagttgctgccaccgcctcagcttgaccgctccatctcagataaagacaag
agagatattcagaatcaatctccgctgactgtgtcctccgtgaaagcgtcctcttccggc
ggaagcggcaaggatagtggcaaggacagcaataaggatatggcggaccgcctggacatg
ccaccgccgcccagccccgcctcttctacttgcagtgacaccagcacttcacacaaacgt
gctaaacgtgtgaccgttcgtggcgaggaaggttcttccaacgatggctccaaacgtgac
gaggaagagtggccattgaaggaagtagtctttctcgaggatgtgaagagcgtgccattg
ggccgcgtgctcaaggttgacggagcttacgcggcagtgcggttcccgactatgggcaag
gacggcaaggaggtgctgccctccaccactgatgactggacgaccgtgcttcaagactgc
cggctcgtacgcaaagatgatttggtagcggtgaagtggggcgcgggaagtggatctggg
tcccgcggaccggactgcctgcagcgctcgcccaggaaggtcgctcttccaccagagttg
caagttattaccatcgcagttgacagtcgcggggtgcacgccgtagtgaagcgaccgggc
ggcgcgttggcgtacgccgtatacgcggtgggcgcgactcgtgcgcttactgacagcgtc
ttccccactgaccacgaggcattgctcggtcacaccaacggagccggtattcaactcgcc
actgccgcagagggtagcgaggcggtggtggtgatggcggacggcaacggcgcgctgtac
cccatcgcgcgcgactgtgtaggcatggtgcgcgagccgccgccgctcaacctgccgccc
gcgcgcgcactcaccgcacacgcgctgccgctgcagccgcatggcgccgcgcactcgcac
cacgccgcgctcaagtcacaggtggcgcttataataatagtaccagagccacagctgatg
atgccgcgtgtgctgcgctgcgatttggaaggtgtgcgccagctgctgcatctactcgaa
gcggacaacaacaaacaacaaatactttccatccttcaagaacggtgtgatggcaacagg
aatatactacatgcttgtgtgcacatgtgtgcacctacatcaaacaaagaacccgatata
gtagaaaattcttcgatgccgaacgtagcgagcggcactagtggcagcggaaacaatacc
gatgaagctgtgccagctatttcttggcccccagaaacattcgaggcttccggcgatgaa
gacagtttaatgggacttactaataacagtaaaatatcgaatggcggggcgaacggcggc
ggtgcggtgagcgcggatcctgcggagcggcgcggcaacgcgctggctgccctgcgcgcg
ctctgcgagagcccagtcctgcagccctacctcatgcagctgctccttgctaaggacgga
atgggccaaacgccgttgatggcggcagtggcggagcgtgcgtaccgcgcggcgctcgtg
ctgctggacgcgatcaggtcgtgccccgaagcggacgaggcgcagcgctctgatgccatc
ttcccgcccaacgcgcaccctgaccactcgccgctcctcgtgctctgttgcaacgacacc
tgcagctttacctggacaggacaggaacatatcaatcaggatatatttgaatgcaagact
tgtggtctcactggatcgctttgctgctgcactgaatgcgcgaaggtttgccacaaagga
cacgactgcaagctgaagcgcacgtcgccgactgcgtactgtgactgctgggagaagtgc
cgctgcaaggcgctggtgggcggcaactgggctgcgcgctgcgacctcctcgccaggctc
gctagggacacgcagctcgccacgcatttcaactccaggggcgagtcgatcctgctgttc
ctggtgcagacggtagggcggcaggcggtggagcagcgtcagttccgcgctggcgacggg
cggggccgcgcgccgcgcaagcagcccggctccgacgctgaggtcgacacgcccgaccac
gacctcgagccgccgcggttcgcaaggcgcgctctgctacatctactgggtgattgggct
gctgtggaagcggctgttatgtgtggcgccaccgcctcggagcctgaaggccggcccggc
agcccctcgcttaaccagtccggtaccacgctcctcgacaagtttacacacgcactcatc
gttaagtgtaccaatgaaatgctagacacgttgttgcacacgctaatgcgcgagcagcag
aatgaggcggtgccgggacgggcggagcgcgcgcgcgaggtggcgcgccgcttcgtgcgc
tccgtcgccaggatcttcgtcatattcagtgtcgagatggcaccaggcgcagccaagaag
agagggccactttcgatcacatcctcgttggtccggtgccggcgtgtattcgctgcgcta
gtagcacttgccgtggaggagctggtggaggcagccgacgccctgctcgcgccggtccgg
cttggcgtggtgcgccccactgccccattcccacttgccacaacctacgtcgatcttgtt
aatggcagcgaggatttgtttggagtcgagcccctatctacaggacacactcggctcgga
cacagtcgcagggaatcaaacaccggcggaggccgcggggcagccgcaggcggtgcttca
atgggcggatcagcgctggctcctgacagagcctccacgcccgtcgccactgaatacgca
gatgatgtggccgaagcgccctccctgggtggtgacgacgatgcctccgagaccgacgag
cctgccatggcggcagccgaccccaccccggacgcacaacacgatgatgcaatgggcgaa
agagggcaagaacaacatgtagtcgttgaaaacggcacggagcgcgcggagggaggcgaa
agcgagagcgagctggatctgctggccgaggtggagacagagagtgactccgatgaccag
gacaatgccgagtccgcgcagcgcagcgtgcaaactcgcgccacacagggttctgatgcc
ggtatagcatcgctgctaatgtatccagaggacgagagcggggactcaacgcagccggag
gacgaggactcggaggcgggcgagaccgacgagcaggacggcgaggccgagcctccgctg
cacgacggcgagccgctcgagcgccgcgccgcgccgcctgcgcgccccaacctcgcgccg
cactccatgcaatgggcgatacgatcgcgcgagccgacgcgcggcacgacaagcagcgca
ggcggggtgcggctgacgggcagctcctcgctggtgttcatcgacccagcctcgctgcga
cgctctgccgctgcggccgccgctggcgcgcacgacccgcactccacatctaccaccgct
tccttcttggcacgagcgttcggcattgtcatccgtcaaatcgcggatctactgtgggag
tatgaacgtataactctgccgttaccgcgcctggtgcctctggcgtaccgcgaggcgctg
cgcctgcagtgttacctcgaacgacaactcaagcccacttgggactggctcgttaccgtt
atggacgctacagaagctcagttgagattcggcgcttcattgacttcgaacaacgcgggt
tctgcggcagcggaacacagccgcaccaacgccaccaccacccgccgcaccacctctttc
acctcgcccgccacgcgcatcatcggcttctcggagggaccgcgcggccgagatagagac
caaggtgtggaggcgggcagcgcgcggcgcgagttcctggcgtactgcctctcgctactg
cgcgcgcacagcgccgagcacgcggagcagctgcccgtgttagacgtggccgcgctcaag
cacgtcgcgtacgtgctggacgcgctcatatactacatgcgagctgcgcagccgcaaccg
caccaccacccacatttatggacagccgatgaaaatgaaaacgaggaaggcgacgaggag
atggtagtgggtggcggaggcaccaacgagtctgacggcgagggcgatggcgcacgcggc
cgcacgcacgcctttttccagcgatccgactccacgctctgtctgggatgtcccccgcca
gatcctttcaatatgacaatgcaagatgcactgccgctggccgaccagccgcagctgctg
cagcccaacgcgcgccgcgaggacctgttcggcatgccgcgccagcccgtcaccctgcca
cccgccgacgacgctaacaccggcgccgcaaatccgcttgaagtgatgtgcctgttgaaa
gtggttcctcgtcggttgggtttgtcatcgcgcggagctgagcgcggctggtcgccgccc
gcgcgccccgcctccgcaccgcccgcgcacacacacaccatggcgcttcttaaagtgatg
tgcctgttgaaagtggttcctcgtcggttgggtttgtcatcgcgcggagctgagcgcggc
tggtcgccgcccgcgcgccccgcctccgcaccgcccgcgcacacacacaccatggcgcgc
gacgagccgcaggatttatcctgtgctaaagatactgtaacaaaaatggacaccggaagt
gatggtgaatatccatccgattctgattctgatgaagcaagacaaatccaaaggaagaaa
catcacaggcatccgcacgcgtcgacgtctggtagcagctcgcggcaggaccggcaggag
gcggcaccgccatcggagttccacacgctggtggacaccgcctgctccatcatagacgcg
ccgcaccaacagaacatcgcgctgcctaaacctggagtgagcggatctgtgcacgagccg
cggccgtccacctcgcgcagccccggcaagactgttattgtacgtgctggcgaattacta
agtgttgccgatccattagagtcgcaggagatatctgctcacgtgacagtagagacgacc
ggcctcaccacggcccccttgttacctacacaagtacttaatgcacctgctcaagctcgc
acttgtccgtcactgggagcgaccgtgtcgcacgacctgctgttaggtcggtggcggcta
tcacttgacctgtttgggcgcgtgttcaccgaggacgtgggcctcgagcccggctccgtg
gtcgccgagctcggcggcttcccagtcaaggaggtcaagttcaggcgcgacatggagaag
ctacgcaactcacagcaaaaagatttgaccctgcataagatggagcgtgatcgtgcgaag
ctactacagcagacattcgcggagttgaatagcgcattcgcggggcagaacagacgcgcg
cacagcgcacagccgccgctcgccgtcaaccgcgtcaaggtgacgttccgcgacgaaccc
ggcgagggcagcggcgtcgccaggtccttctacaccagcgtcgctgaggcgctactagca
aacgagaaactgcctccgctggagtcgacctccgggagcggagtcaacagcaacgcgtct
aacggcacctcaggctccagcggcgccaatgcaggcgccagcgctaacactggaacacgt
agtagcggtgcaggcagagcgcgcgctaaggacacggcgcggcgggtgcccggcagagct
gcgccgcggcctcccacagcgcgcgagccgcgccgcgtgctcagtgtcgatgcgaggccg
tactcaccacaggctgcaccggggactgagggcgcggggtacagtggcgaccggcccggc
ggacacaacgagcatctcaccctgcatcaggcacaactcggcgaaagattatatcccaga
gtacattctctccatccgacatttgcgggcaaaatcactgggatgctgttagaattgaca
cctgcccaacttttagtactacttgccagtgaagacgcattgagacagaaagtgcgagag
gccatggaccttatagttatgaatccttctgaagcgatactagacctggacgtattctcg
ctgtcggaacgcggcggcggtgtgggcggcggcgggggcgcggcactgggtgctggctca
tcggcggcggctgcggacgatgcggcgccactcttctactcgccaggcaagcgcggctac
tactcgcctcggcagggacgcgccacctcggagcgcatcaacgcctttaggaatgtcggc
agaatcatcggactgtgtctgctacaaaatgaactgtgcccaatgttcctcaatcggcac
gtgttgaaatacatactggcccgacctatacgtttccacgatctcgcgttcttcgaccct
gtcgtctacgagagcttgcgccaactcgtcgccgacgcagagaatggagattctcattcc
ttgtttgcagctctcgatctcaactttagtttggaaatgtgtgaagaagaaggcggtggt
tgtgtggaattggtacccggtggccgagaaatcgaagtgaccgcgctcaacgtgtacgat
tacgtgcgcaagtacgcacaacatcggatgctgcactcgcaggaaaaagctctcgagtcg
atccgagtgggcgtattggatgtgttacccgagtcctccttggagggcttgaccgctgag
gacctgcggctcctgctgaacggcgtgggcgacatcaatgtggccgcgctggtctcgtac
acaagcttcaacgacgagagcggcgagcctcccgagcggctcgtgaggttcaaacgttgg
ctctgggccatcgttgacaaaatgactcatcttgaacgacaggatctggtgtacttctgg
acgggctcgccagcgttgccggcgtcggaggagggcttccagccaatgccgtctgtgacg
atccggccggctgatgacgcgcacctgcccaccgcaaacacgtgcatctcgcgcctctac
atcccgctctactcatcgcgacacgtactcaagcacaagctgctgcttgctataaaaact
aaaaatttcggcttcgtgtag
DBGET
integrated database retrieval system
