Papilio machaon (common yellow swallowtail): 106712349
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Entry
106712349 CDS
T05138
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03030
DNA replication
pmac03410
Base excision repair
pmac03420
Nucleotide excision repair
pmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106712349
03410 Base excision repair
106712349
03420 Nucleotide excision repair
106712349
03430 Mismatch repair
106712349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmac03032
]
106712349
03036 Chromosome and associated proteins [BR:
pmac03036
]
106712349
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106712349
DNA replication proteins [BR:
pmac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106712349
DNA Replication Termination Factors
ELG1-RFC complex
106712349
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106712349
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106712349
Check point factors
HRAD17(Rad24)-RFC complex
106712349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
RCF1-5-like_lid
AAA_16
AAA_30
AAA_22
AAA_24
Gp44_lid
Mg_chelatase
RuvB_N
AAA_11
Rad17
bpMoxR
AAA_assoc_2
AAA_19
AAA_3
SLFN-g3_helicase
AAA_5
DUF815
Viral_helicase1
AAA_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
106712349
NCBI-ProteinID:
XP_014360351
UniProt:
A0A194R7E3
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MQAFLKTGKLSAADKPSTSGSKPSKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLSG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQL
TVSNTKADGRPCPPYKLVILDEADSMTTAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLAKENVIKRLQEVCSAEGVDVGDGEVLQQAVHTCDGDLRRALTALQCC
QRLLGKVTADGLIEVTGLVPDNLVNEYLSIKNYNELEIFVKKFLMDAYSASQLLEQLSAA
VVCAGHLTNKQKCVISEKLAICSHRLLDGGAEFMQLTDLGCTIIMANNNP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttttaaagacggggaaactgtcagcagccgataagccatcaacgtcaggt
tcaaaaccttcgaagaagaaaccaccggcaccatgggttgaaaaataccgacctaaaaca
attgacgatatagttgatcaaggtgaagttgtacaagttttaagggaatgtttatcgggt
ggtgatttacctcacttattattctatggacctcccggaactggtaaaactagtgctatt
ctagcagctgcaaggcagctctttggtgatataacccgcgaccgtgtgttggagctaaat
gcctcggatgaacgtggcatacaagttatcagggataaagtcaaatcgtttgctcaacta
actgtcagtaatacaaaagcagatggaagaccgtgtcctccatataagttggttatcctg
gatgaggcagattcaatgacaaccgcagctcaagcagcactacgtaggaccatggagagg
gaaactcgcacaactcggttctgtcttatctgcaactatgtgtccagaatcataccaccc
atcactagcagatgttcaaagttcaggttcaagccgctagcaaaagaaaatgttattaaa
aggttacaggaagtttgcagtgctgaaggtgtggatgttggtgatggtgaagtacttcag
caggctgtacacacttgtgatggtgatttgcggcgagcactcactgccctgcaatgttgc
cagcgtttacttggaaaagttaccgctgatggattaattgaggtgactggtttagttccc
gataatttggtcaatgaatatttaagcatcaagaattataatgagctagagatatttgtt
aagaagttcctaatggacgcatactctgcatcacaactgctggaacagttgagcgcggcg
gtcgtctgtgcgggccatctgaccaacaagcagaagtgtgtgatcagcgaaaagctggca
atctgttcacaccgcttgctggatggtggcgccgagttcatgcagctcacagacctcggt
tgtaccatcatcatggctaataacaatccctga
DBGET
integrated database retrieval system
