Papilio machaon (common yellow swallowtail): 106713342
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Entry
106713342 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106713342
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106713342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_EF3_N
HEAT_EZ
INTS7_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
106713342
NCBI-ProteinID:
XP_014361627
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MTSRLDRLFVLLEAGAGAATRRAAARQLGEVQKAHPEELHRLLGRLMKYLRSPAWETRIA
AAQAVEAILSNVPEWHPTQCNVKKEENVETEEVCLLRCETFDIERVLENGAHLMGSEGRE
YDLEEVALSAGDMKERLAKQRQQLNARLGLDVAAKLGVDLTSVYTNEDLCPVKIQVKPEP
PRRPVQELVPIATKPLSSREMNVAKRRARAAYGKQKSRDCDEGPSATSSQPTPSISLSLE
PDRKKIKLEPVEDFIVDSESAVPDGLGVWGPSSRWPLEGWCAALQAQLFHGAWEARHGAA
SALRELLRARISASAARRPATTEQQMEDAHQEWLEDMALRLLCVLALDRFGDFVSDQVVA
PVRETCAQTLGVALAQLREVRVRLVADALATLARQPQWEARHGALLAFKYLLAARQEVAC
AAGALEHLVAALEDVAEDVAGVAAGALAPAAAALAAARPHALPAVAARLWQLLRDQDDLA
APANAYMALLAALCALPQAAKHLHPIDLADVLPRLWPYLDHSTSSVRKATLQTLRTLTRP
LVTTDDTKTNGNGDTTVVDVKVNGTDKVDSGLLTWTPELLQDAMRHVYQRVLFEHVHDIQ
EVALQVYASILIFLVAACPMLATWMCLAMQPPRLPVDPSLLLYTPHKERRTRTTSLQSEQ
VPSEVRPTQKWFIGGSESQPAAARDRNVTRARCLAADILGYLSCYLVQPAPGIEYKSEDE
SPIHCYVKVMIVYLRSGSALQRLVAGLVVSAWARYTRKHNMYPPQVPHNGVNGDQSADSQ
ERKDISLLAPELLTSTLHAALNQALYYDEVALNCNRILKEARDLLAMMKHYKLAVDGEEF
NNILRLEQVVHMCNVTQPMVAGLKLKRVLQTLEERRASLLTAANQCAVDQATFNVSVQAA
LAGACANLHALPERLNPVVRPLMESIKKEASEELQAHSADTLAELLTQLVDRDPCPNNKV
LVNLKAFLRCDPEFTPRISLEVVDEADSGSGDSGSETKREPQSTLTTLDKYNGILTLREQ
QRNAERSAPRRGRPPAAATLAAAAAGQDLTLDTLFPQEDEARKLLSIQRRGATLALTSLT
RHFGDELPDKLPKLWEFITEPFAKVMTDAELVAQEPEAAEELISRLQVVEAVGARVGDAL
WPRLLGGTRACAALCRAHYTALRHMAARALAALAARDPHAVMHELVHELIAALDDVRNDR
VRCGAAETLARLVDALQLNVVPYIVLLVVPILGRMSDHCEAVRTMSTRCFATLIQLMPLD
GAVPEPAGLSAEMRARRQRDKDFLEQLFNPKSIKDYKIPVPVSAELRSYQQAGVNWLRFL
YEYGLHGVLCDDMGLGKTIQSIVVVAGSHWERAHQRRDQLPSLVVCPPTLTGHWVFEVNK
FIDSKYLRPLQYVGPPTERERLRALARADKYNLIVASYDIVRKDIDFFSTIKWNYCISTK
XSCIKNGKTKAFKAIKQIVANHRLILSGTPIQNNVLELWSLFDFLMPGLLGTERQFTARY
SRPILAARDPKATPHQLQAGALACEALHRQVLPFLLRRVKEDVLRELPPKITQDYYCELS
PLQRRLYEHFARDHAPQHALAHSQTHVFQALHYLQNVCNHPKLVLTPEHPEAARISAELA
AQRSSLDDIHHSAKLPALKQLLLDCGIGTVASDAENGAVVSQHRALVFCQLKKMLDIVEQ
DLLRAHLPTVTHLRLDGSVPPHQRHAIVTRFNTDVSIDLLLLTTAVGGLGLNLTGADTVI
FVEHDWNPMKDLQAMDRAHRIGQRKVVNVYRLVTRDTLEEKIMGLQKFKLMTANTVISSE
NAAMETMGTEQLLDLFQLSGQQRPQPTAPASLLDALPDLWDDKLYEEEYDMTNFIKSLNN
IKS
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaagactagatcgtctgtttgtgctgctggaggccggcgcaggtgcggcgaca
cggcgtgcagcggcccgccagttgggcgaggtgcagaaagctcatcccgaggagctgcac
cggctgctcggccgcctcatgaagtacctgcgctcgcccgcatgggagacgaggatagcc
gctgcacaggcagtcgaagcgatactctcgaatgttccagaatggcatcccacacaatgc
aacgtgaaaaaagaggagaacgtggagacggaagaagtttgtctgctccgctgcgagacg
ttcgacatagaacgtgtgttggagaacggtgcgcacctcatgggctccgagggtcgtgag
tacgatctggaagaagtggctctctcagctggagatatgaaggaacggttggctaaacag
aggcaacaacttaacgcccgcctcggtctcgatgtggcggccaaactgggagttgacctc
acctcggtgtatactaatgaagatctctgccctgtcaagatacaagtcaaacctgagcca
ccgaggcggccagtacaagaactagtaccaatagcaacaaagccgctgagttctcgcgag
atgaacgtagcgaagcggagagcgcgcgccgcctacggcaagcagaagtcgcgcgactgc
gacgagggtccctccgccacctcttctcagcctacaccctcaatctcgctctccctagag
ccagacaggaagaagattaaattggaacctgtagaggactttattgtggacagtgagtct
gcggtgccggatggtctaggcgtgtggggcccgtctagccgctggccgctggagggatgg
tgcgcggcgctgcaggcgcagctgttccacggcgcgtgggaagcgcgacacggcgccgcc
agcgcgctacgggagctgctccgcgcgcgcatcagcgccagcgccgcccgacgtccagca
actactgaacagcagatggaagacgcccatcaagaatggctagaggatatggcattaaga
ttgctctgtgtgttggctctggatcgatttggagattttgtatcggaccaggtggtggcg
ccagtgcgggagacgtgtgcgcagacgctgggcgtggcgctggcgcagctgcgcgaggtg
cgcgtgcgtctcgtagcggatgcgctcgccacactggcgcgccagccgcagtgggaggcg
cggcatggtgcgctgctcgccttcaagtatctgctcgccgcaaggcaggaggtggcgtgt
gctgctggcgcgctggagcacctggtggcagcactggaggatgtggcggaggatgtagcg
ggagtggcggcgggagcgctcgcccccgcagctgctgcactggctgccgcacgaccccac
gccctgcccgcggtcgcggccagactctggcagctgctgagggaccaggacgatcttgca
gcaccagctaacgcttacatggcgctactggccgcgctctgcgccttgccacaagccgcc
aaacatttgcaccccatcgatttagcggacgtattacctcgcctgtggccgtacctcgac
cactctacaagttcagttcgcaaagccacgctacagacactgcgcacactcacacgccct
ctggtgaccaccgacgatactaagactaacggtaacggtgacactacagtggtagatgtc
aaagtgaacggcacagacaaagtagacagcgggctgctgacctggaccccggagttattg
caagacgccatgcgacatgtataccaaagagtactatttgaacacgttcatgatatacaa
gaagtcgctttgcaagtatatgcgtcaatacttatattcctggtagcggcgtgtcccatg
ttggcgacgtggatgtgtctcgccatgcaaccgccgaggctgccggttgacccctcgttg
ctactctatactccacataaggagcgtcggacacgtaccacctcattacagtcagagcaa
gtaccgtcagaggtgcgtcccacacagaagtggtttatcggcggtagcgagtcgcagccc
gccgccgcacgcgaccgcaacgtcacccgcgctagatgtctcgccgctgacatactggga
tatttgtcatgttatcttgtgcaaccggcgcctggcatagaatataaatcggaggatgaa
agtccaatacattgctatgttaaggtgatgatagtgtacctgcggtcgggtagtgcgctg
cagcggctggtggcgggacttgtggtgtcagcgtgggcgaggtacacgcgtaaacacaac
atgtaccccccacaagtaccacataatggagtcaacggtgatcagagcgcagatagtcaa
gaacggaaagatatatcactactagcgccggagttactaacaagtacgctgcacgcggcg
ctcaatcaagctctctattatgacgaagtcgcgctgaactgcaataggatattgaaagag
gctcgcgacctgttggcgatgatgaagcactacaagctggctgtcgacggtgaagagttc
aacaatatattgcgattagaacaggtggtgcacatgtgtaacgtgacccagccgatggta
gcggggctgaagctgaagcgagttctgcagacgttggaggagcggcgcgccagtctgctc
accgccgccaaccagtgcgcagtcgatcaggccaccttcaatgtctcagtgcaagctgcg
ctggctggagcttgtgccaatctgcacgcgctgccggagcggctgaaccctgtggtgcgg
ccgctgatggagagcatcaagaaggaagcctcggaggagctgcaggcgcactccgcggat
accctcgctgaactgcttacgcagctcgtcgacagagacccctgccctaataacaaagtg
ctagttaatctgaaggcatttcttagatgcgacccggagttcacgccgcgtatatcactg
gaggtggtggacgaggctgactccggcagcggcgatagcggctccgagaccaagagagaa
ccacaatcgaccctcacaacgttggacaaatataatggcattttgacattgagagagcag
cagcgcaatgcagagcggagcgcgcctcgccgcggccgcccgcctgccgccgccacctta
gctgctgcggccgccgggcaagacctcacacttgacaccctcttcccgcaagaagacgag
gcgcgtaaacttttaagtattcagagaagaggagcaacactcgcactgacaagtctcacc
agacattttggtgatgaactgccagataagttgcccaaactgtgggaattcatcacggag
ccattcgccaaagttatgactgatgcagaattagtggcacaggagccggaagctgcggag
gagctgatctcgcggctgcaggtggtggaggcggtgggtgcgcgcgttggcgacgcgttg
tggccgcggctgctgggcggcacacgcgcctgcgcagcgctctgtcgcgcccactatacc
gcactgcggcatatggcggcgcgcgcactcgctgcactcgccgcaagagacccgcacgct
gttatgcacgagctagtgcacgagttgattgctgcgctagatgacgtgcgtaatgaccgc
gtacggtgcggcgcggcggagactcttgcgcggcttgtggacgcgctgcagctgaacgtc
gtcccatatattgtgctgctcgtagtaccaatactagggcgtatgagtgatcactgcgag
gcggtgcgcacgatgtccacgcggtgcttcgcgacgctgatccagctgatgccgctagat
ggcgccgtgcccgagccagccggtctcagcgccgagatgcgcgcgcgcaggcagcgcgac
aaggacttcctggaacaactcttcaatccaaaatctattaaagattacaaaataccagtg
ccagtgtctgctgaattgaggagttatcaacaagctggtgtgaactggctacgcttcctg
tacgagtacggtttgcacggcgtgctgtgcgacgacatggggctcggcaaaaccattcag
tcgatagttgtggtggctggctcgcactgggagcgcgcccaccagcgccgcgatcaacta
ccctcgctcgttgtctgcccgcccacgctcaccggtcactgggtgttcgaggtgaacaaa
ttcatagacagcaagtacttgcggccgctgcagtatgtgggccctccaacagagcgcgag
aggctgcgagccctcgcccgcgctgacaaatacaaccttatagtagcctcttacgatatt
gtgcgcaaagatatcgacttctttagcactatcaaatggaactactgtatctcgacgaag
nngtcatgtataaagaatggtaaaaccaaagcgttcaaggcaatcaaacaaatagtcgcc
aatcatagacttatactctccggtacgcctatacagaacaacgtacttgaactttggtcg
ctatttgactttttgatgcctggtctattgggtacggagaggcagttcactgcgagatat
tcacggcccattcttgctgcacgcgaccccaaggcaacacctcaccagctacaagctggc
gctctcgcttgtgaagcgttacaccgacaggtactgccgttcctgctgcgccgtgttaag
gaagacgtactgcgagagttaccgccgaagataactcaggattactactgtgaactaagt
ccgttacagcgccgtctgtacgagcactttgcgcgagatcacgctcctcaacacgctctt
gcgcactctcagacacatgtcttccaggcgctgcactatctgcagaatgtgtgcaatcat
cccaagctggtgctgacgccggagcatccggaggcggcgcgcatctcagccgagctcgca
gcccagcgctcctctcttgacgacatacatcactccgccaagctacccgcgctcaagcaa
ctgttactggactgcggcatcggcacggttgcctcggacgcagagaacggcgcggtggta
tcgcaacaccgtgcgctggtgttctgccagctgaagaagatgctggacattgtggagcag
gatctgttgcgcgcgcatttgcccactgttacacatttacgtctcgacggcagcgtgcct
ccgcaccagcgacacgccatcgttacaagattcaatactgatgtatctatcgatctactg
ctactcaccactgctgtgggtggtctaggtttgaacctgacgggtgctgacacggtgatc
ttcgtggagcacgactggaacccgatgaaggatctacaggcgatggaccgagcgcaccgc
atcggtcagcgtaaggtcgtcaatgtctaccgcctcgtcacacgagatacgctcgaggag
aagatcatgggactgcagaaattcaaattgatgacagccaacacggtaatcagcagtgag
aacgcagccatggaaaccatgggcactgagcagctgttagacctgttccagctgtcgggg
cagcagcggcctcagcccacagcacccgcctccttactcgacgctttgcccgacctctgg
gatgataagctgtacgaagaggagtacgatatgaccaattttatcaagagcttgaataat
attaagagttaa
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integrated database retrieval system
