Papilio machaon (common yellow swallowtail): 106713550
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Entry
106713550 CDS
T05138
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106713550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmac03400
]
106713550
DNA repair and recombination proteins [BR:
pmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106713550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_I
MutS_II
MutS_III
Nitrate_red_del
AAA_27
Motif
Other DBs
NCBI-GeneID:
106713550
NCBI-ProteinID:
XP_014361861
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MSTLQPIQALNLDSVQQRAFIKYFNSLTEKPPTTVRIFDRNEYYSVHGADATTAAREVFC
SIANIKKMGLEPDKLDYLVLSKGNFEILIRKLLLVKRYRVEIYVSEGSTKNNEWRLEYKG
SPGNLSQLEEVLGDGLGTANENAPCLMAVNFKTDAVTKGRLLGVACVTAADYQFSISEFT
DDDLLTQLETITVQTAPAECLVIQGDNKDQKALKKVMQRANVTVTKLKRSDFSTEGLIQD
LNRLLKFKNNQSQDANAFPETRKEVAMSSLAAAIRYTTLLNENTNFGRFHLTTITTAGFL
HLDAAALTALNVFPELGDISHSPTRSIYGLLDRCRTQHGKRFHLTTITTAGFLHLDAAAL
TALNVFPELGDISHSPTRSEYLVKASFDEQLQSLRSELDRLQVAAERQLRAAADSLGLDP
GKTIKLENNPQNGFYFRITNKEEHAIRGSKKFTIIDAVKGGVRFKNNSLENITDEYVQTK
DTYEREQDKVVAEIVNIASGYSECLFNLSHMISRVDVLVSMSVAACSAPLPYCRPVITDS
MEELLLSEVRHPCLEVQEGVSYIPNDVHFKRGKCVMHIITGANMGGKSTWMRSCGAAVLL
AHAVRDLYLTATPDSLVLIDELGRGTSTYEGCGIAWAIAEKLATESQCFCLFATHYHELT
RLEAQHPGVIVNSHAQASVVDGQLLLLHRIQPGAAPHSLGLHVAKLADLPDYIIQYAEEK
QSQLETNLFEIEASMKSQETSEGQEIILDFLRKCKQINESVTSDEEMMKEIDKLKRELQQ
HNSKYLQSLIA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccttacaacctattcaagctttgaacttagattcagtgcagcaacgggctttc
atcaaatactttaactccctaacagagaaaccgccaacaacagttcgtatattcgaccgc
aatgagtactacagcgttcacggcgctgatgctacgacagccgctcgcgaggtcttctgt
tctatcgctaatatcaagaagatgggtctcgaaccagataaactcgactacctcgtactc
tctaaaggaaattttgaaatacttatcaggaaacttttattggtgaagcgataccgagtt
gaaatatatgtatcggaaggatctacaaagaataacgaatggcgattagagtataaaggt
tcacctggtaatctttcgcaattagaagaggtgttaggtgacggtcttggcactgccaat
gaaaacgcaccttgcttgatggcggtcaattttaaaacggatgccgtgacgaagggtcgt
cttctaggagtggcttgtgtgacggccgccgactatcagttctctatctcggagttcaca
gacgatgatttactgacgcagctggagacaatcactgtgcagacggcgccggcggaatgt
ctcgttatacaaggcgataataaggatcaaaaagcccttaagaaggtgatgcaaagagcc
aatgtgacagtaacaaaattgaagagatcagatttctccacggaaggtctgattcaagat
ctgaatcggttgctcaagttcaaaaacaatcagtcacaagatgctaacgcattcccagag
acgcgcaaggaagtcgccatgtccagtttagctgctgccatcagatataccacattactg
aatgaaaacaccaactttggaaggttccatctgaccaccatcacaactgctggcttcctg
cacctggatgctgcagcgctgaccgcgctcaacgtattcccagaactgggcgacatctcg
cactcgcccacacgaagtatctacggtctactcgacagatgtcgcactcaacacggaaaa
cggttccatctgaccaccatcacaactgctggcttcctgcacctggatgctgcagcgctg
accgcgctcaacgtattcccagaactgggcgacatctcgcactcgcccacacgaagtgaa
tacctagtgaaggcgtcatttgacgaacagctgcagagtctacgtagtgagctggacagg
ttgcaggtggcggcggagagacagctacgagcagcagcagacagcctcggtctagatcca
ggcaagactattaagttggaaaacaatccacagaatggattttattttagaataacaaat
aaagaagagcacgcgatacgcggcagtaagaagttcacaataattgatgcggtgaaggga
ggagtcagattcaagaacaactcattggagaacatcacagatgaatatgtgcagactaaa
gacacttacgaaagggaacaggacaaagttgttgctgaaattgttaatattgcatctgga
tattccgaatgtttattcaacttatcacatatgatatcccgcgttgacgtgttggtgtca
atgtcggtggcggcttgttcagcgccgttgccatattgccggcctgtcatcactgacagt
atggaggagctgctgctcagtgaggtccgccatccctgcctggaggtgcaggaaggtgtc
tcttacatacctaatgatgttcacttcaaacgaggtaaatgcgtgatgcatataataacg
ggtgcaaacatgggcggcaagtctacatggatgaggtcgtgcggtgcggctgtgttactg
gcgcacgccgtaagagatctatacttaacggcgactcctgacagcttggtgctgatagac
gagttaggacgcggcacttccacatacgagggctgcggcatcgcctgggccatcgctgag
aaattggcaacagaatctcaatgtttctgtctattcgcgactcattatcacgagctgacg
cgtctggaggcacagcatcccggcgtcattgtgaactcgcacgcgcaggcgtctgtagtg
gacggtcagctgctgctgctgcaccgcatccagcccggcgcagcaccacactcgcttggt
ctgcacgtcgccaagctggctgatctgccggactacatcatacagtacgctgaagagaag
caatctcaactcgaaacgaatctattcgagatcgaggcgtctatgaaatctcaagaaact
tcagaaggacaagaaattatattggatttcttacgtaaatgcaaacagataaatgagagt
gtgacgtcagacgaggagatgatgaaggagattgacaagttgaaacgagagcttcaacaa
cacaacagtaaatatttgcagtctcttattgcgtga
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