Papilio machaon (common yellow swallowtail): 106713704
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Entry
106713704 CDS
T05138
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmac04147
]
106713704
00535 Proteoglycans [BR:
pmac00535
]
106713704
00536 Glycosaminoglycan binding proteins [BR:
pmac00536
]
106713704
Exosome [BR:
pmac04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106713704
Proteoglycans [BR:
pmac00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106713704
Glycosaminoglycan binding proteins [BR:
pmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106713704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
106713704
NCBI-ProteinID:
XP_014362036
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MNALYKQGSTDGTVNGDPLASGTLTKLGRSTEANLPLSEYCQCTPNDISSILESIPGIKG
PPGPPGPTGADGTTGAPGKTGQMGDPGPPGPTGMKGDQGEKGETGSPGIEGQPGPKGDPG
ADGTPGPQGPAGPPGPPGPVSSALIESSGLYGSSNRGTVGAPGDRGPMGLPGPQGERGYP
GNKGEKGLHGSKGDKGERGYVGLRGPHGVKGERGQAGRDGLPGLPGPHGRPAEKGEKGAR
GPPGPPAPYSPTLLEKSIGTGLVRPGLRDVTSLSKGGKGDKGERGEKGEKGVRGIEGPQG
FPGNDGKPGERGDIGPSGLPGIQGLAGNTGPKGDKGETGAPGPVAISRDEAVIMTKGDKG
ETGPRGKRGHPGSPGIRGPPGLPGPPGIPGTNGISGDIGLPGWTGPPGATGQPGPQGPKG
EKGDSGFDLEKVKGEKGDRGDDGTPGLPGKEGPRGPPGPPGTPAANIQYISAPGPPGPPG
PPGAPGPGYINETPDMLTDTPGTNRRGPFPGKQRDALQILRSLNQLMQNRQQLYGLRDPT
DNLEDDMDFDDDEEGKAIVGTILFKTTESLIKLGIACPRGTLAYIIQEQALLVRVNNGWQ
YVAMGSLLAIQSSSNGTPTRTPLQNILETSSLVHHKNPAGEGPVLRLAALNEPHTGDMHG
VSSTNYECRRQAQRAGLEGTFGAFISSRVQTIDSIVSWVDREIPVVNTRGDVLFNSWGEM
FDGSGALFAHAPRIFSFSGKNVLVDPNWPTKAVWHGAGPNGEPAMDAYCDAWHSSSADKF
GLASSLHSNKLLDQETYSCSTRLIVLCIEATPADTVRRKKRSRLPVGEKFRLLKPVEDRN
DSRQIL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattgtataaacagggctcaactgatggaacagtgaatggagatccgctggca
tccggcacactgactaagctaggcagatcgacagaagctaacttaccgctatcagaatac
tgtcagtgtacacctaatgatatatcgagcattttggagtctatacctggaataaagggt
ccgcccggacctccaggtccgacgggagctgatggtactacgggagcgccaggaaaaacg
ggtcaaatgggggatccggggcctcctggacccactggtatgaaaggtgaccagggagaa
aagggggaaaccggctcaccgggcatcgaaggccaaccgggaccaaagggagatccagga
gcggatggaacgccgggaccacaagggccggcaggaccaccgggaccaccgggaccagtc
tcttcggctttaatagaatcatcgggattatacgggtctagtaatcgcggaacagttggt
gctccgggagacagagggccaatgggcttacctggtcctcaaggtgagagaggctaccca
ggaaataagggtgaaaaaggcttgcatggatcaaaaggagataaaggcgaaaggggttat
gttgggcttagaggaccacacggcgtcaaaggcgagcgaggtcaggcgggccgcgacggc
ttgccgggacttccgggcccgcacggccgccccgcggagaagggcgagaaaggtgctcga
ggaccaccaggtccacctgctccttacagtccaacattactagaaaagtctattggaact
ggactagttcgaccggggctgcgtgacgttacctccctttcaaagggggggaaaggggac
aagggagaacgaggagaaaagggtgaaaaaggtgtaagaggtattgaaggtcctcaagga
ttcccgggtaatgatggaaagcccggtgaacgtggtgatataggaccatctggtttacct
gggatccaaggattagcgggtaatactggacctaaaggggataaaggtgaaacgggagcg
cctggaccagttgctatttcaagggatgaagccgttataatgacaaagggtgataaaggt
gaaactggtccaagaggaaaacgtggtcacccaggttcacctggaattcgaggtccacca
ggacttcctggtcctcctggaataccaggcactaatgggatatcaggagatattggtctg
ccaggatggacaggccctccaggagctacaggtcagccaggtcctcaaggacctaagggt
gaaaagggtgattctggatttgatcttgaaaaggttaaaggagaaaagggcgatcgaggg
gatgatggaacgccaggtctacctggaaaagaaggtcccagaggtcctcccggtcctcct
ggaacgccagcggcaaacattcagtacatatcagcgcctggacctccgggaccacctggt
ccacctggtgcgccgggacctggttacatcaacgagacaccagatatgttaactgatacc
ccaggaactaaccgccgtggaccattcccaggtaaacaacgggacgcattgcaaatactg
agaagcttaaatcaactcatgcagaatcgtcagcaactttacggtttacgagatcctaca
gataacttagaggacgacatggatttcgatgatgatgaagaaggaaaagcaattgtcggt
acaattctgttcaagacaactgaatctttaataaagctcggcatagcctgtcctcgaggt
actttggcgtatatcatccaggagcaagctctgcttgttcgtgtcaacaacggctggcaa
tatgtagcgatgggatcactattggcaatacaatcatcttctaacggtactccgactaga
actccgctgcagaatattctggaaacttcgagtcttgtgcaccataaaaatcccgcgggg
gaaggtccagtgttgcgtttagctgcattaaatgaaccgcacacgggcgatatgcacggc
gtcagcagcactaactacgagtgccggagacaagcgcaaagagccggtcttgaagggact
ttcggagcgttcatatcttctagagtgcaaactattgattctatagtgagttgggtggac
cgagaaatacctgtagtgaatacacgcggcgacgttttgttcaactcatggggtgaaatg
tttgatggatcgggtgcactttttgcacacgctccgagaattttcagcttcagtggaaaa
aatgttctagttgatccgaactggccaacaaaagcggtatggcatggtgccggacctaat
ggggaacccgcaatggacgcgtattgtgatgcatggcatagcagtagcgctgataaattt
ggattagcttcatcactacattcgaacaaacttttagaccaagaaacatattcgtgtagt
acgcggttgattgtactatgcatcgaagcgactcctgcagatacagtcagaagaaaaaaa
cggtccaggttaccagtgggtgaaaagtttcgattactcaagccggtagaagacagaaat
gacagcagacaaattttatag
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