Papilio machaon (common yellow swallowtail): 106713705
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Entry
106713705 CDS
T05138
Name
(RefSeq) collagen alpha-1(XXII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmac04147
]
106713705
00535 Proteoglycans [BR:
pmac00535
]
106713705
00536 Glycosaminoglycan binding proteins [BR:
pmac00536
]
106713705
Exosome [BR:
pmac04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106713705
Proteoglycans [BR:
pmac00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106713705
Glycosaminoglycan binding proteins [BR:
pmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106713705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
C17orf58
Motif
Other DBs
NCBI-GeneID:
106713705
NCBI-ProteinID:
XP_014362037
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MKFFFFIGVVLLSKTLEAELYSDYNILQDVIKVYEKYTSDSERINFIDGPDGDTAFEFDN
TSRVLSPISNTTLNNLMLSSPFILSVMFKFDESDYSCLFAIKNLENLVKLRLCVTPKAPD
VFELNIDSVGLRENVNLVVYEDLSVNWVDIYIVFDKTITLYTKCSPINTFVPKEEMEDVY
FSSDDWIYIGQSGVEESDPFRGAIHKIVLYPDTDNIESVCNNDIYLPESFKDDLTLPPPE
GGDDRVEVNMKGDKGEKGDIGARGEMGEMGMKGEKGDKGSAGLSITGPQGPQGPIGPQGP
IGKEGPKGEEGACHCSESVVSSIIKKMPEMKGPRGEPGPRGEDGDTGATGETGIPGKQGE
RGPKGSTGEKGDKGDDGTPGKDGQNGLKGEPGRDGPIGPPGPKGEIGHPGPPGLACEREE
EPENFPIPGDKGDVGPQGPPGPRGEKGEKGERGVMGERGLPGDLGHTGPQGKQGEKGEVG
NPGLNGKPGVPGTHGKHGLDGAKGDKGEQGLPGIPAKLSSILDGDLDPDEISLIVEKLKG
YKGEPGIKGDKGDKGQNGTIGIPGAAGRRGDRGEKGDTGSTGPKGNKGEKGGTGPPGVVS
MSDLSRLKGPKGDRGHTGKPGPRGYAGHNGAKGSVGPMGQKGSKGDTGVPGPMGPKGSTG
AAGTRGEKGERGEIPEINLEKLKGEKGERGPLGPPGEPGKMGPPGLCQKTEDSLPVPGPP
GPPGPPGSPGPPGTPGSPGISVTGPKGEPGGIVSTKTLYSFSDYPVSNVDNDDDDDVFHK
METMIYKTSKGLKRRTRSTPVGTLAYVLEEKVLLLRVDRGWQYIVMGSLYHERAHKPNAP
LRTNHNERRRKNFIRLVALDEPYAGNMETGTNRTGRKTVDQECHVQSKKAGFTGTFAAFL
ANKVEDLKSILKTADKDVAVLNIHQQLLFDSWIDMFNDSGTVAFKSDIYSFSGKNVLIDP
TWPIKAVWHGGTSLGVRSPKYFCREWLTDSPKYFGSAAKINDNKLAIHEKYTCDNKLIVL
CVEVRPNVVRRQRHISRRRLAYERLLNSNI
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctttttctttattggtgtggttctgctctctaagacattagaagccgaatta
tattctgattacaacatactccaagatgtgattaaagtttatgaaaagtatacttcggat
tccgaaagaataaactttatagatggaccagatggagataccgcattcgaatttgacaac
acaagcagagttctatcaccaataagcaatactacattaaacaacctcatgctttctagt
cctttcattttaagtgtgatgtttaaattcgacgaaagtgattattcttgcttgtttgct
ataaaaaatttagaaaacttagtaaagttaagattgtgtgttacaccaaaagctcccgat
gtttttgaactaaacatagatagcgttggccttagagaaaacgtaaatttagtcgtgtat
gaagatctaagtgtaaattgggtggatatatacatagtttttgataaaacaataacactt
tacactaaatgttcgcctattaatacttttgtaccaaaagaagaaatggaggatgtttat
ttttcaagtgacgattggatttacattggtcagtcaggggtcgaggagagtgatccattc
agaggtgccattcacaaaattgttttatacccggatacagacaacatagaaagtgtttgc
aataatgatatttatctccccgaaagtttcaaagatgacttaactctaccacccccagag
ggtggagatgacagagtagaagtaaatatgaaaggcgataaaggtgaaaagggcgatata
ggggcaagaggagaaatgggagaaatgggaatgaaaggagaaaaaggagacaagggaagc
gcaggattgtccataactgggccacaaggtcctcaaggtccaataggacctcaagggcca
atcggtaaagaaggccctaaaggagaagaaggagcatgtcattgttcagaatcagttgta
tcgagtataataaagaaaatgcctgaaatgaaaggcccacgaggtgaacccggtcctaga
ggagaagatggcgatactggagcaactggagaaacaggaatacctggaaaacaaggtgaa
agaggtccaaaaggttcaaccggtgagaaaggtgacaaaggcgacgacggtacgccaggg
aaagacggtcaaaatggattgaagggtgaaccagggcgagatgggccgataggcccaccg
ggacctaaaggggagattggtcaccctggaccacctggactggcatgtgagcgggaagag
gagcctgaaaactttccaatacctggcgacaaaggagacgttggacctcaagggcctcct
ggcccccgcggtgaaaagggagagaaaggcgaaagaggtgtaatgggcgagcgtggctta
ccaggtgatttgggacatacaggcccgcaaggaaaacaaggtgaaaagggggaagtcggt
aacccaggcttaaatggcaagcctggtgtacctggtacacatggtaaacatggtcttgat
ggtgctaaaggtgacaaaggtgaacagggtcttccaggaataccagctaaactgtcatct
atattagacggcgacttagaccctgatgaaatatctttgatagtcgaaaagttaaaagga
tataaaggagagccaggaattaagggtgataaaggagacaaaggacaaaacggtaccatc
ggtattcctggagctgctggacgtcgcggtgatcgaggagaaaagggtgatacaggatcg
acgggacccaaagggaacaaaggcgagaaaggtggaactggcccaccaggggtagtatca
atgtctgacttgagtcgtctgaagggtcctaaaggagaccgtggccatacaggaaagcct
ggtcctcgtggatatgcaggacataacggcgcaaagggatcagtgggccctatgggtcag
aaaggctccaaaggtgatacgggtgttcctggaccaatgggtcccaaaggctcaacaggt
gctgctggaacaagaggtgaaaaaggtgaaagaggcgaaataccagagataaacctggaa
aagctcaaaggggaaaaaggtgaaagaggtccattgggacctccaggagagcccggcaaa
atgggcccacccggtttatgccaaaagactgaagatagtttaccggtgccaggaccaccc
ggtccacccggtccacccgggtctccaggtccaccgggtacacccggttcacccggtata
tccgtgactggacctaaaggagagcctggaggaattgtttctactaagactttgtatagc
tttagtgattatccagttagtaatgtagataatgatgatgatgatgacgtttttcataaa
atggaaacaatgatttacaaaacatcaaagggattaaaaagaagaactaggtcaacaccg
gtggggactctcgcttatgttttggaagaaaaagtactattgttaagggttgatcgtggt
tggcaatatattgtgatggggtctttgtaccacgagagagcgcataaaccaaatgctcct
ttgcgaacaaatcataatgaaaggcgaagaaaaaatttcattcgtttagtagcgctcgat
gaaccctatgcgggtaacatggagacaggaacaaatcgcacaggtcgtaagactgttgat
caagaatgtcatgtccagtcaaagaaagctggatttacaggaacatttgctgcttttctc
gcaaacaaggtggaagacttgaagtctattctcaagactgcagacaaggatgttgccgta
cttaacattcatcagcaacttctgttcgattcgtggatcgatatgtttaacgactctgga
acggtggcttttaaatcggatatttacagttttagcggcaaaaatgtactcattgatcct
acgtggccgatcaaagctgtatggcacggaggaacgtcattaggagtgcgatcgccgaaa
tatttttgtcgagaatggctgacagatagtcccaaatatttcggtagtgctgccaaaata
aatgacaataagctagcaatacatgaaaagtacacatgcgataataaactcatcgtacta
tgtgtcgaagtacgacctaatgttgtaagacgtcagagacatatatcgagacgtcgtctt
gcgtatgaacgtttattaaatagtaacatctga
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integrated database retrieval system
