Papilio machaon (common yellow swallowtail): 106713817
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Entry
106713817 CDS
T05138
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106713817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106713817
03041 Spliceosome [BR:
pmac03041
]
106713817
03036 Chromosome and associated proteins [BR:
pmac03036
]
106713817
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106713817
Spliceosome [BR:
pmac03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106713817
Complex B
106713817
Complex C
U2 SnRNP specific factors
106713817
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106713817
TFTC complex
106713817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Fungal_virus_P2_N
GtgE
Motif
Other DBs
NCBI-GeneID:
106713817
NCBI-ProteinID:
XP_014362176
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIVISRGKTIELLRPDPNTGKVHTLLKVEIFG
IIRSMMSFRLTGGTKDYIVIGSDSGRIVILEYIANKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPSGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACRVADLTGEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLNDNTVRIISLDPSDCLAPRSMQALPAGAESLCIVEQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVHGAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLDYTPRKF
VVNSDSNHIIVLETDHNAYTEEMKKQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
ILPENVFSSPKAGAGMWASQIRVIDMGVSGGQPGTVYKLPLEQNEAAVSMCIVHWTAQAH
LGVPHLVVGVAKDMILSPRSCTEGSLHVYKIFSNSGKLELVHKTPIDDYPGALAAFNGKL
MAGVGRMLRMYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVSDVQESVFCVKYKKREN
QLIIFADDTNPRWITNTCVLDYDTVAMSDKFGNVCVMRLPHSVSDDVDEDPTGNKALWDR
GLLNGASQKGEIVVNFHVGETVTSLQRATLIPGGSEALLYATISGALGVLLPFTSREDHD
FFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLER
TPAEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatttgactctccaaggctctacagccattacgcatgctgtgcatggt
aatttttctggtaccaaacaacaagaaatagtaatatcacgtgggaaaactattgaactg
cttcgaccggatcctaacacaggaaaagtgcacacattgttgaaagtggaaatatttggt
ataatacgatctatgatgtcatttcggctcaccggaggaactaaagattatattgtgatt
ggttcagattctggaagaatagttattcttgaatatatagcaaataagaacattctagag
aaggtacatcaagaaacatttggcaagtctggttgcagacgaattgttccaggtcaatat
ttggctattgatcctaaaggcagagcagtgatgattggtgcaattgaaaagcaaaagttg
gtgtatattctaaacagagacgcagaagctagattgacaatttcatctccgctagaggcc
cacaaatctaacacattggtctaccacatggttggtgttgatgttggttttgaaaaccca
atgtttgcatgtttggagattgattatgaagaggctgattctgatcctagtggtgaagct
gctcaaaagactcaacagacattaacattttacgagttggatttgggcttgaaccatgta
gtaagaaaatattccgaacccttagaagagcatgcaaactttctcataacagtgcccggt
ggtaatgatggaccttccggagtacttatatgttcagaaaactatctcacatataaaaac
ttaggtgatcaacatgacatccgttgtcctattccgaggagacgtaatgatttagatgat
cctgaaagaggaatgatatttgtatgttctgcaacacacaaaaccaagtccatgtttttc
ttcttggcacaaacggaacagggtgacatatttaaaattacaatagaaactgatgaagac
atggtaactgaaataaaactcaaatactttgatactgtaccagttgcagcatccatgtgt
gtattgaaaactggatttctatttgttgcctgtgaatttgggaaccactacctgtaccaa
attgcacatttgggagatgaagatgatgaaccagaattcagctctgcgatgcctttagaa
gaaggagatacattcttctttgctcccagacctctaaggaatttagttttggttgatgaa
ttggactcattatcacctatattagcatgtcgcgtagctgatttgactggtgaagataca
cctcaagtatacttggcttgtgggcgaggtcctcgatcttctttgagagctttaagacat
ggtttggaagttgcggaaatggctgtctctgaactgccaggttctcccaatgctgtatgg
actgtcagacgacacaaagatgaggaatatgactcttacatcattgtatcgttcgtaaac
gctactcttgtgctgtcgattggagaaactgtagaagaagtgacggactccggtttcttg
ggaactacaccgaccctgagctgtcacgcgctgggaagtgacgccctcgtgcaagtatac
cctgacggtataagacatataagagccgacaagcgtgtcaatgaatggaaagcaccgggc
aagaaatctatcgtcaaatgtgctgtgaatcaaagacaagtcgtgattgccctcactggt
ggagaacttgtgtactttgaaatggatcctactgggcagttaaatgaatatacagaaaga
aaaaaattgtcatcagatgtgtcatgtatggcgctaggatctgtagcgactggagaacag
cgggcctggtttttagctgttggattaaatgataacactgttaggatcatttctttagac
ccatcggattgtttagcacctcgctctatgcaagctctgccggctggtgcagaatctctt
tgcattgttgaacagccattcgaatctggtgctaaatctgctctgcatcttaatatagga
ttaagcaatggcgtacttttgagaactaccttagactctgttagtggtgacctagctgac
accaggactagatatttaggttcaagaccggtgaagctattcaaagtgagagtgcacggt
gcggaggcagttttagctgtgtcgtctaggacttggttaggataccattatcaaaatcgt
ttccatttaacacctctatcatatgaatgcttggaatatgcagccggatttagttcagaa
caatgcgcggaaggtattgtcgccatttcatcaaatacattaagaattcttgcactggag
aagttgggtgccgttttcaaccagacttacttgccattagattatacacctcggaagttt
gttgttaactctgacagcaatcacattattgtattggagactgatcataatgcttacact
gaagaaatgaaaaagcaaagaagagttcaaatggcacaggagatgagagaagcagcagcg
ggtggaggtccggaagaacaacagttagctaacgaaatggcagatgcttttctatctgat
atactaccagaaaatgtattctcatcaccaaaagctggtgcaggtatgtgggcgtctcag
atccgtgtaatagacatgggagtgagcggaggtcagccgggcacagtgtacaagttgcca
ctagaacagaacgaggcggcagtgtctatgtgcatcgtgcactggacggcgcaggcgcat
ctcggtgtaccgcatctggtcgtcggcgtcgccaaggatatgatcctctcccccagatct
tgtacagagggcagcttgcatgtctacaagatattctccaattctggcaaactggagctg
gttcataaaacacctattgatgattatcctggagcgttggccgcattcaatggtaaactg
atggcgggtgtgggccgcatgttgaggatgtacgacatcggccgcaggaaactgttgcgt
aaatgtgaaaatcgacacattccaaatctgattgccgatattaaaactataggccagaga
atttttgtctctgatgtacaggaatctgtattctgtgttaaatataagaagagagagaat
caattgattatattcgctgatgacacaaatccaagatggataacaaacacttgtgtactg
gattatgacacagttgccatgtctgacaagtttggcaatgtgtgtgtgatgagactaccg
cattcagtgagcgatgatgtagatgaagaccccaccggaaacaaggctttgtgggataga
ggtttattaaatggagcatcacaaaagggagaaatagttgtgaatttccatgtgggagag
actgtgacgtcactacaaagagctacattgataccgggaggttctgaggcgttgctgtat
gccaccatcagcggggcgctcggggtactgctgcccttcacctccagggaggaccacgac
ttcttccagcacctggagatgcacatgcgcagtgaaaactcaccattatgtggccgcgat
catctgtcatttagaagttactattatccagtgaagaacgtaattgatggtgatctgtgc
gaacagttcaactctctggagccggccaagcaaaaggcgatagcgggcgacctcgagcgc
acgcccgctgaggtctccaagaaacttgaagacattagaaccagatatgcattctaa
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integrated database retrieval system
