Papilio machaon (common yellow swallowtail): 106713860
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Entry
106713860 CDS
T05138
Name
(RefSeq) vacuolar protein sorting-associated protein 13D-like
KO
K19527
vacuolar protein sorting-associated protein 13D
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmac04131
]
106713860
Membrane trafficking [BR:
pmac04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106713860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
Motif
Other DBs
NCBI-GeneID:
106713860
NCBI-ProteinID:
XP_014362235
LinkDB
All DBs
Position
Unknown
AA seq
3151 aa
AA seq
DB search
MLEGLVAWVLNNYLGKYVENLNTDQLSVALLSGKVELENLPLKKDALRHLGLPVEIKAGF
IGKVQLQVPVRQIRSAPWLIAIENLYLVAAPVNLDEWDSAVEAHIAHERKTALLDALEAQ
WRAEHEARDAGYYAASYSTWLSYGTGLLANIVENLQLKLTDVHIRYEDAVTCAPQTFACG
LTVQSLTAESCDANWVRGFTLLADADCSFKLLELQQLAVYWDPMPPAAMMAACTLAELTE
RMRATWLCEHRYLSAPASARARVRRERCEQPLRSRTRPRLACHLTLPSVQLDLTSRQYSE
VVGCVLGLERIARLREFRALRPDVPVRGHARAWWLYALRCHAPHHRWMDPKPTWALCAER
ARRTRRYVDICLGVLSNPAATLPPEEKAIKDEFEWNTPLSVLKPLREVAMRKVPIATPAS
TPEDAPASSGRSVLVRWFPLWWGWYAPGGAADAPAGGSEQPQQSQQPQLAAAPAAPAAPR
LEEEILDVIADSLEDNTLLRRDTVFGLFEFTLERGSLNLTTEPDDRHQLQGAASPEGGGG
GGGGTGVELQFSSVCVRVETRPRTGSHALHVSLGAVCLRERITPGTLFPVLVAPQGMIRE
GLSAMNAAASAAAWWRAQQTSAPTSPPAPAEPLFQLSYEKRPFGLNCDYKLWVKSMSLEV
VYCAAAARWAQQFVAAPWGPRRTIAHVRDQTRARLLTHWEHMLRAHPGERRSWQVELDVS
APQILFVEQLSARGTAALLVDFGRLRLANAHFTEDCGVTGGRYNIELSDLQILVGRAKDN
WKYAHTKTTSALHLLDRFSISLQAERRVVHTSDPQYPSATLCGSLPALVVHLSEHKLAAV
RAVAIGCRLPDLARESPSQEGAEVEEEEEDESSVSSETERSELSAHNNATLFMLQFAIDQ
MSLEVQSRGRSIAEVQVCGVKAALSARPCDLSLSLSVHSLLLVDALQTYGPDFELLVASH
KHVGMDTASGSIRGSEPTSPTSPTSPASPDSRAAPAPPTPRALRHALRSLHRAAPTALIA
PASLHGTDKEVRHQIVCPVGRATPPTLSTCRRPSRGPSAARGARGVAGAGGVAGAEGVAG
ATGAVWGGGNGWSAPGLVDTEALIAVEICLVKGDADSEDLRIANILFNNLDVIANQETIV
ELIGFAHRVLGPRAPHEHRPAPPAADVPDGPLPTPPPTPPRTPPMLETYSMGPMRKIFLR
VMMSVAQRAVRTEITFDFHRLGVLLLRAAVLDGALVAKKIATATVGEARIQATLAARRLE
VGGSLGGVQVVSLCEGAGLHTRVLAAGRAHAPDAPDDKAQALLFTITRDLLPGDTPDATV
VETSVSVRVASVWYTQSGALLRELQSCLTEFKQYLANLARSIRAAAADMAIGLVHPSPRG
ESLYGNPRLAQSTEAWGRRRTVSAGATPPAHAPPPATATPSLDEADVRTDILLTVNIELE
SPVVVVPRAAHSTQVFVAHLGRMSLTNRPGAPRNTQYSVSVRDISLASLDVGERLRRQPL
SAENMGAVYDVSCGRPVLHDTALQLTLDLHERDHLPHCDVSGAIVGALQVSASREQYEQL
LDTLRWVADSAYPDVRPPSPAPAPAPAPASNAASAQGDGLAEGAVPALVEPAVPTLRLDP
QLRAAVLAVPPPQRAPELHAPRPRSHAPLTVSFEVSELAVELRADLGDGERSLVALIFRE
FALTYHHLRPHETDLQVSLHSVTMEDLTKEPESRHRVLLASHSPPAPRKSLFLSKSCPEL
HAPAAPPAPPHLAPLHYMKHLTTSLPATINKSGVTNTERGRDKPGRSESKCGATPPCSPE
PLEPLEPPERADSCDTFQMSGEEEADRPAGDDNLVWLSVHTRDPQHPNFYDRFDQVSKQT
KVEFNCLKLVLSIDSWVAVLDFFGVAGDEPASEPTAEPSRPAGDGVASNGDSAALTETEV
LVRSLSVVVVGGRGDACRALVSRAHVRTRSGRGARRVHATLDALSLVDLAPRAAPYAHRL
RTRARHALALDYRRLSAAEAAAAGHETSLSVRMGPLTYVHTKRFVLELQAFARDFSLLRR
VIAQARKKVSSAVASTRTDRMRLRLRCAAPLIVLPVSGRSRAALAAQLHLLHLDNCFRRA
GDPDTISTLADPAAREREVLDVREVRLEGVTLRCWGAGRAGAPLLPAPATFALRIEHNLS
DTHNVPDTSVQGTLTTLELALDAAQYRLVPGVLTHNLGEPCLDLLPPTTPPPAATPPQST
TKTSNATQQVWTTWSLKLDLQDVRVRLAAAAGPLACVNFIKSRLLLETYSDLGQDVDLVS
QEILVSDVRYADEPANRRGNVFSHIVQPLPDHRHSVQAEVHARKRQDSSAYTILINNMRL
MAILDWWEAANQFIMQPPLPPTDPDLVHLEEACRMCLGGAGGGAQGGAETEEAGPVELKL
NVTDSQLVLVEDASVWDTNAVILKSTTVLRYSWGAARPVSCELSGLEVFSCVLGLEDETA
LAIVEPANLHAYLDSDRLLHVSMGTLNLRLSYHDMRMFAAMLQSLPVQARAALSGKSDAA
EPAGERDAPANSEHMLAADGCAAPRLLAARWARPARGPPPAPPDPPPSQPSAVWPLAAVK
VSAECATLCVIDDCLDSDVPLLEVSLSDLHLDQDLRQVEETFPDPVLVSTPAGEAGAVPL
GGGAGAGQLRAQLAIDYYNRTLSAWEPALEPWRFETKWEYTLSSALSLRRLQTEVSSADT
LDVNVTAALLDLVRLVRGNWTADYYALPAAHPAHPAHPAHPAPANSAQVSGNSAETSPKG
SPAGHRRRAPFVPYALRNHTGHRLWFTTLLTTAEQLLESEAENGGGAGGVSAPDDSWVSV
SAGDTEPFSFGLRRGRARSALHRLALRLPAWSPPDPVRVDQVGVFFRTITHQKSFAEARL
VLEVTLEGSARKLVTVRSALQLVNQLPHAVEVRVDAAPAAASSHTPSHESLGDGLERVVG
DEAHEETRRRIRSAAAGAHLAAGLRGLGLGLLGGMTSLVKHSYEGATQEGLGGFVSGVGK
GLVGTVTKPVIGVLDLAAAAAAAVRESSARAGRAAPARTREPRPAPHAAALTRYCPAAAR
GAQLLHALAPPASPALVHPERFLAYRPVRGAPHDIRALLTDTHLRIFTCKHDTPQIVMET
HLSNLVSCTAVYAEGAHLVELCGRVRVMFQF
NT seq
9456 nt
NT seq
+upstream
nt +downstream
nt
atgttggagggcctcgtagcttgggtattgaacaattaccttgggaagtatgtggaaaac
ttgaatacggatcagctaagcgtagctttattgtctggcaaagtagaattagagaaccta
cccttgaagaaggatgcgttgcggcacttgggtctgccagtggagatcaaggcagggttc
attggcaaggtgcagctgcaggtgccagtgcgccagatccgctcagcgccctggcttatt
gccattgagaatctttacctggttgccgcaccagtgaacctagatgagtgggacagcgcg
gtggaggcgcacatcgcgcacgagcgcaagacggcgctgctggacgctctggaggcgcaa
tggcgcgccgagcacgaggcgcgggacgccggctactacgccgcctcctactccacctgg
ctcagctacggcacaggcctgctcgccaacatcgtcgagaacctgcagttgaaattgacc
gacgtgcatatccggtacgaggatgcggtgacgtgcgcgccgcagactttcgcgtgcgga
ctgacggtgcagtcgctgacggcggagtcgtgcgacgcgaactgggtgcgcggcttcacg
ctgctggccgacgccgactgctccttcaagctgctcgagttgcagcagctcgccgtctac
tgggaccccatgccgcccgcagcaatgatggccgcctgcacgctcgccgaattgaccgag
cgtatgcgcgcgacgtggctgtgcgagcaccggtacctgtcggcgccggcgtccgcgcgg
gcccgcgtgcgccgcgagcgctgcgagcagccgctgcgctcgcgcacacgtccgcgcctc
gcctgccatctcacgctgcccagcgtccagctcgacctcacctccaggcagtatagcgag
gtggtcggctgcgtgctggggctggagcgcatcgcgcggctgcgggagttccgcgcgctt
cgccccgacgtgcccgtgcgcggccacgcgcgcgcctggtggctgtacgcgctgcgctgt
cacgcgccgcaccatcgctggatggatccgaagccgacgtgggcgttgtgcgcggagcgg
gcgcggcgcacgcggcggtacgtcgacatttgcctcggcgtactgagcaacccggccgcc
acgctgccgccggaggagaaggccatcaaggacgaattcgagtggaacactccgttgtcg
gttctgaagccgctgcgtgaggtggcgatgcgcaaagtgcccatagccaccccggcttcg
acccccgaggacgcgccggcgagctcggggcgcagcgtgctggtgcgctggtttccgctg
tggtggggctggtacgccccggggggcgccgccgacgcgcctgccggtgggtccgagcaa
ccgcagcagtcgcagcagccgcagctggccgccgcacccgccgcgcccgccgcgccgcgc
ctcgaggaggagatcctggatgtgatcgcggactcgctggaggacaacacgctgctgcga
cgcgatactgtgttcggcttgttcgagttcactctcgagcgcggctcactcaacctgacc
acagagccagatgaccgacatcaacttcagggtgcagcaagtccggagggtgggggtggg
ggcgggggcggtacgggggtggagctgcagttctcgagcgtgtgcgtgcgcgtggagacg
cggccgcgcacgggctcgcacgcgctgcacgtgtcgctgggcgccgtctgcctgcgcgag
cgcatcacacccggcacgctcttccccgtgctcgtcgcgccccagggcatgatccgggag
gggctgagcgccatgaacgctgctgcgagcgcggcggcgtggtggcgcgcgcagcagacg
tcggcgccgacctcgccccccgcccccgccgagcccctcttccagctctcctacgagaag
cgccccttcggcctcaactgtgactacaagctgtgggtgaagtcgatgtcgctggaggtg
gtgtactgcgcggcggcggcgcgctgggcgcagcagttcgtggcggcgccgtgggggccg
cgccgcaccatcgcgcacgtgcgcgaccagacgcgcgcgcgcctcctcacgcactgggag
cacatgttgcgcgcgcatccgggcgagcgccggtcgtggcaggtggagctggacgtgtcg
gcgccgcagatcctgttcgtggagcagctgagcgcgcggggcaccgccgccttgctcgtc
gactttggccgcctgcgcctcgccaacgctcacttcaccgaggactgtggtgtgactggc
ggcaggtataacatcgagctgagcgacctgcagatcctggtgggccgcgccaaggacaac
tggaagtacgcacacaccaagaccacgtcggctctgcacctgctcgaccgtttcagcata
tcgctacaggcggagcggcgcgtggtgcacacgagcgacccgcagtacccctcggccacg
ctgtgcggctcgctgcccgcgctcgtggtgcacctcagcgagcacaagctggccgccgtg
cgcgccgtcgccatcggctgccgtctgcccgacctcgcgcgcgagtccccgagccaggag
ggggccgaggtggaggaggaggaggaggacgagagcagcgtgagttcagaaacggagcgc
tcggagctgtcggcgcacaacaacgccacgctcttcatgctgcagttcgccatcgaccag
atgtcgctcgaggtgcagtcgcgcgggcgcagcatcgccgaggtgcaggtgtgcggggtg
aaggcggcgctcagcgcgcgcccctgcgacctgtcgctctcgctgtcggtgcactcgctg
ctactggtggatgcgctgcagacctacgggccagacttcgaactgctcgtcgccagccac
aaacatgtcgggatggacaccgcgtctggcagcatccgcggttctgagcccacgtcgccc
acgtcgcccacgtcgcccgcgtcacccgacagccgcgccgcgcccgctccgcccacgccg
cgcgcgttgcgccacgccctgcgctcgctgcaccgcgccgcgcccaccgcactcatcgcc
cccgcctcgcttcacggaacggacaaagaagtccgacaccaaattgtatgtccggtgggg
cgtgcgactccgccaacactgagtacatgtcgacggccttcacgtggcccatcggcggcg
cggggggcgcggggcgtggccggcgcagggggcgtggccggcgcggagggcgtggctgga
gcgacgggcgcggtgtggggcggaggcaacggctggagcgcgcccggcctcgtcgacacc
gaggccctcatcgctgtagaaatatgcctcgtcaaaggcgatgccgattccgaagacctg
aggatcgctaatatattgtttaacaatttggatgtaattgccaaccaggagacaattgtg
gagctgatagggttcgcacatcgcgtgctgggcccgcgcgcgccgcacgagcaccgcccc
gcgccgcccgccgccgacgtgcccgacggccccctccccactccgccccccactccgccc
cgcacgccgcccatgctcgagacgtactcgatgggcccgatgcggaagatcttcctcaga
gtaatgatgtctgttgcgcagcgcgcggttcgcacggagatcaccttcgacttccaccgg
ctgggcgtgctgctgctgcgcgcggccgtgctggacggcgcgctcgtcgccaagaagatc
gccaccgccacagtcggcgaggcgcgcatacaggccaccctcgcggcgcgccggctggag
gtgggcggctccctgggcggcgtgcaggtggtgtcgctgtgcgagggcgcgggcctacac
acgcgcgtgctggccgccggccgcgcccacgcgcctgacgcgcccgacgacaaggcgcaa
gctctgctctttaccatcacccgcgaccttctgcccggcgatacccctgatgctacggtt
gtggagacgtcggtgtcggtgcgggtggcgagcgtgtggtacacgcagtcgggcgcgctg
ctgcgcgagctgcagtcctgcctcaccgagttcaagcagtacctggccaacctggcgcgc
tccatccgcgcggccgccgcggacatggccatcggcctcgtgcaccccagtcctcggggc
gagtccctttacggtaatccgcggctggcgcagtcgacggaggcgtgggggaggcgccgc
acggtctccgcgggcgccacgccccccgcacacgccccgccccccgccaccgccacgccc
tcgctggacgaggccgacgtgcgcaccgacatactgctcaccgtcaacattgagttggag
tcgccggtggtggtggtgccccgcgcggcgcacagcacgcaggtgtttgttgcgcacctc
ggccgcatgagtctcacaaaccggcccggcgcgcccaggaacacgcagtacagcgtgagc
gtgcgcgacatctctctcgcctcgctggacgtgggcgagcgcctgcgccggcagccgctg
tcggcggagaacatgggcgcggtgtacgacgtgtcctgtggccggcccgtgctgcacgac
accgcgctgcagctgaccctggacctgcacgagcgcgaccacctgccgcactgcgacgtg
agcggcgcgatagtgggcgcgctgcaggtgtccgccagccgcgagcagtacgagcagctg
ttggacactctgcgctgggtcgccgactccgcgtaccccgacgtgcgcccgcccagcccc
gcccccgcccccgcacccgcacccgcatccaacgcggcgtcggcgcagggtgatggtctg
gcggagggcgcggtgccggccctggtggagccggcggtgcccacgctgcggctggacccg
cagctgcgcgccgccgtgctggccgtgccgcccccgcagcgcgcgcccgagctgcacgcg
ccgcgcccccgctcgcacgccccgctcaccgtgtcgttcgaggtgtcggagctggcggtg
gagctgcgcgcggacctgggcgacggcgagcgcagtctggtggcgctcatcttccgcgag
ttcgccctcacctaccatcacctgcgcccgcacgagaccgacttgcaggtgtcgctgcac
tcggtgacgatggaggacctgaccaaggagccggagtcgcggcaccgagtgctgctggcc
tcgcactcgccgcccgcgccccgcaagtccctcttcctgtccaagtcgtgcccggagctg
cacgcgcccgcagccccgcccgccccgccgcacctcgcgccgctgcactacatgaagcac
ctcacgacctccctgcccgcaactatcaataaatcaggcgtcacgaatacagagcgcggt
cgagacaaaccgggcaggtcggagagcaagtgcggcgcgactccgccgtgctcgcccgag
ccgctcgagcccctcgagccgcccgagcgggcggactcctgcgacaccttccagatgtcc
ggcgaggaggaggcggaccggcccgccggcgacgacaacctggtgtggctgtccgtgcac
acgcgcgacccccaacaccctaacttttatgacagatttgatcaggtatcgaagcaaact
aaggtggagtttaactgcctaaagctggtgctgagcatagacagctgggtggccgtgctg
gacttcttcggcgtggccggagacgagccggcctcggagcccacagccgagccctctcgc
ccagccggcgatggagtcgcgagcaacggtgatagtgcggcgctgacggagaccgaggtg
ttggtgcgctcgctgtccgtggtggtggtgggcgggcgcggagacgcgtgccgcgcgctc
gtgtcgcgcgcgcacgtgcgcacgcgcagcgggcgtggggcgcgccgcgtgcacgccacg
ctggacgcgctctcgctcgtcgacctggcgccgcgcgccgcgccctacgcgcacaggctg
cgcacgcgcgcccgacacgcgctcgctctcgactacagaaggctgagcgcggcggaggcg
gcggcggcggggcacgagacgagcctgagcgtgcgcatgggcccgctgacgtacgtgcac
acgaagcgcttcgtgctcgagctgcaggcgttcgcgcgcgacttcagcctgctgcgccgt
gtcatcgcgcaggcgcgcaagaaggtgtcatctgcggtggcgtcgacgcgcacggaccgc
atgcggctgcggctgaggtgcgcggcgccgcttatcgtgctgccggtgtcggggcgcagt
cgcgccgcgctggccgcgcagcttcacctgctgcacctcgacaactgcttccgccgcgcc
ggcgaccccgacactatcagcacgctggccgaccccgccgcacgcgagcgcgaggtgctg
gacgtgcgcgaggtgcggctggagggcgtgacgctgcgctgctggggggcggggcgggcg
ggcgcgccgctgctgcccgcccccgccaccttcgcgctgcgcatagagcacaacctcagc
gacacacacaatgtgcccgatacgagcgtgcagggtacgctgaccacgctcgagctggcg
ctggacgcggcgcagtaccggctggtaccgggggtgctgacccacaacctgggcgagccc
tgcctagacctcctgccacccaccacgcccccacctgccgccacgccccctcagtccact
actaaaacttcgaatgctacacagcaggtgtggacgacgtggtcgctgaagctggacctg
caggatgtgcgcgtgcggctggcggcggcggccggcccgctcgcctgcgtcaacttcatc
aagtcgcgactgctgctcgagacatactccgacctaggccaggacgtggacctagtttcg
caggagatcctggtgagcgacgtgcggtacgccgacgagcccgccaaccggcgcggcaat
gtgttcagccacatcgtgcagcctctgcccgaccaccgccacagcgtgcaggccgaggtg
cacgccaggaagcgtcaagattcttcggcctatacgattctcatcaacaacatgcgcctg
atggccatcctggactggtgggaggcggccaaccaattcatcatgcagccaccgctgccc
cccacagaccccgacctcgttcatctcgaggaggcgtgccgcatgtgtttgggcggggcc
gggggcggggcgcagggcggggcggagacggaggaggcggggccggtggagctgaagctc
aatgtgacggactcgcagctcgtgctggtggaggacgcctctgtctgggacaccaatgca
gttatactgaaaagcacgacggtgctgcggtactcgtggggcgcagcgcggccggtgtcg
tgcgagctgagcggactggaggtgttctcgtgcgtgctgggcctggaggacgagacggcg
ctcgccatcgtcgagcccgccaacctgcacgcctacctcgactccgaccgcctcctacac
gtgtcgatgggcacgctgaacctgcggctgtcgtaccacgacatgcgcatgttcgccgcc
atgctgcagtcgctgccggtgcaggcgcgcgccgctctctccggcaagtcggatgcggcc
gagccggcgggggagcgcgacgcgcccgccaacagcgagcacatgcttgcggcggacggg
tgcgccgccccgcggctgctggcggcgcgctgggcgcggcctgcgcggggcccgcccccc
gcaccgcccgaccctccgccctcacagccctccgccgtgtggccactcgccgcggttaag
gtgagcgccgagtgtgccacgctgtgcgtcatcgacgactgcctggactccgacgtgccg
ctgctggaggtctcgctgtcggatctgcatctcgaccaggacctgcgtcaggtggaggag
acgttcccggaccccgtgctggtgtcgacgccggcgggggaggcgggcgcggtaccgctg
gggggcggggcgggggcgggccagctgcgcgcgcagctcgccatcgactactacaaccgc
acgctgtccgcctgggagccagcactggaaccttggaggtttgagacaaagtgggagtac
acgctgtcgtcggcgctgtcgctgcggcggctgcagacggaggtgagcagcgcggacacg
ctggacgtcaacgtgacggccgcgctgctggacctcgtgcgtctcgtgcgcggcaactgg
accgcagactactacgcgctgcccgccgcgcaccccgcgcacccagcgcaccccgcgcac
cccgcgcccgccaacagcgcacaagtgagcggcaacagcgcggagacgtctccgaagggc
agcccggcggggcaccggcggcgcgcgcccttcgtgccatacgcgctgcgcaaccacacc
ggacaccgcctctggttcaccacgctgctcaccaccgccgaacaattgttagaatcggag
gcggagaatgggggcggggccgggggcgtgtccgcgcccgacgactcgtgggtgtcggtg
tccgcgggcgatacggagcccttctcattcgggctgcgccgcggccgcgcgcgctctgcg
ctgcaccggctggcgctgcgcctgcccgcctggagcccgccggatcccgtgcgggtcgac
caagtgggcgtattcttccgcaccatcacacaccaaaagagttttgcggaggcgcggctg
gtgctggaggtgacgctggaggggtcggcgcgcaagctggtgacggtgcggtcggcgctg
cagctcgtcaaccagctgccgcacgccgtggaggtgcgcgtcgacgccgcgcccgccgct
gcctcctcgcacacgccctcgcacgagtccctgggcgacgggctggagcgcgtggtgggc
gacgaggcgcacgaggagacgcggcggcgcatccgcagcgcggccgccggcgcacacctc
gccgccggactgcgcggcctcggcctcggcctgctcggtggcatgacgtccctggtgaaa
cacagctacgagggcgcgacgcaggaggggctcggcgggttcgtgagcggcgtgggcaag
ggcctcgtgggcaccgtcaccaagcccgtcataggcgtgctggacctcgcggccgcggcc
gcggcggcggtgcgggagtcgagtgcgcgcgcgggccgggcggcgccggcgcgcactcgc
gagccccgcccggcgccgcacgcggccgcactgacgcgctactgcccggcggcggcgcgc
ggggcgcagctgctgcacgcgctggcgccccccgcctcgcccgcgctggtgcaccccgag
cgcttcctagcgtaccggccggtgcgcggtgcgccgcacgacatccgcgccctgctcacc
gacacgcacctcaggatcttcacctgcaagcacgacacgccgcaaatcgtcatggagacc
catctcagcaacctggtgtcgtgcacggcggtgtacgcggagggcgcgcacctggtggag
ctgtgcgggcgggtgcgggtgatgtttcaattttga
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integrated database retrieval system
