KEGG   Papilio machaon (common yellow swallowtail): 106714299
Entry
106714299         CDS       T05138                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106714299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmac03019]
    106714299
Messenger RNA biogenesis [BR:pmac03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     106714299
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st CSTF1_dimer Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_VPS8 DSE1_N ASA1 Beta-prop_NOL10_N CFAP251_N NBCH_WD40 PAC11 eIF2A Ge1_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_SCAP RMC1_N Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Dicer_dimer Nepo_coat UCP007778
Other DBs
NCBI-GeneID: 106714299
NCBI-ProteinID: XP_014362802
LinkDB
Position
Unknown
AA seq 433 aa
MKENNGDIDTRNVVKNRELLYRMIISQLYYDGFQAIAASLSAAVHADPPCPPSDRLLNVM
MVGLQHEPDRKDRLAASSGAEHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMACR
AGAFSACGQLVATGSVDASIKILDVERMLAKSAPEEVDPGREQQGHPVIRTLYDHTDEIT
ALDFHPREQILVSASRDCCIKLFDITKASAKKAYKSITDAEQVLCVSFHPLGDHIIASTT
HPVIRLYDVTTSQCFVCPIPSHHHKKQVNSIKFSPNGKYFASGSADGTVKLWDTVSNRCF
NTFLAAHDGAEVCSVEFTRNSKYLLTAGLDSSIKLWELASSRCLIQYTGAGTTGKQEHHA
QAIMNHTEDYVMFPDEATTSLCTWHSRSANRCNLMSLGHNGAVRFIVHSGTAPAFLTCSD
DYRARFWYRRNTH
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgaaggaaaataacggtgatatagacacaagaaatgtggtaaaaaacagagaactactg
tatcgaatgataataagccagttgtactatgatggattccaagcaattgcagcaagtctc
tccgctgcagtgcatgctgatccaccatgtccaccaagtgataggcttttaaatgttatg
atggttggtctccagcatgagcctgataggaaggatagacttgcagcctcaagcggtgcg
gagcatctcctcggcacaactggctttgatttggaatacgagatggatgcatcgtcgctg
gcgcctgagccggcgacgtacgagacggcctatgtgacgtcacacaagatggcgtgtcgc
gccggcgcattcagcgcctgcggacagttagtcgccactggtagtgttgacgctagtatt
aagattctggacgtggaaagaatgttagctaagtctgctcccgaagaagtggatcctggt
cgtgagcagcaaggacatccggttatcagaacactttacgatcatacagatgagatcaca
gctcttgacttccatcctcgggagcagatcctggtgtcagcttccagggactgctgcatc
aaactctttgatatcacgaaggcatctgctaaaaaagcttataaatctattacggatgcg
gagcaagtgctgtgtgtgtcattccaccctctaggtgatcacatcatagcgtcgacaact
cacccagtgatccgtctgtatgacgtcacaaccagtcagtgcttcgtctgccccataccc
tcgcatcatcacaagaagcaggtgaattctataaagttttctcccaacggcaaatacttc
gccagcggcagcgctgacggcacagtgaagctgtgggacaccgtctccaacaggtgcttc
aacaccttcctggctgcgcacgacggcgccgaggtctgctctgtcgaattcaccaggaac
agcaagtatttgctgactgcgggtttggactcctccatcaagttgtgggagttggccagc
agcagatgtctcatacagtacaccggcgccgggacaactggtaaacaggagcatcacgca
caagcaataatgaaccacacagaagactacgttatgttcccggacgaggcgaccacgtca
ctttgtacttggcactcgcgctctgccaacagatgtaatcttatgtcactcggacataat
ggtgctgtcaggtttatagtacattctggaacagcgcctgcattcctaacttgtagtgat
gactacagagcaagattctggtacagaaggaatacacattga

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