Papilio machaon (common yellow swallowtail): 106714392
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Entry
106714392 CDS
T05138
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106714392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106714392
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106714392
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106714392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106714392
NCBI-ProteinID:
XP_014362916
UniProt:
A0A194R765
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MAGSLISQSEQVFIVHGVENDFRSDGRSSIDYRPMELETDVVSHASGSARLRLANTDILV
GVKTEIDIPKPETPGLGKIEFFVDCSANATPEFEGRGGEQLANTISSTMQRAYYSPQAFN
LKQLCIFEGKQCWKLYVDILILECGGNLCDAVSLAVKAALFNTRLPCVKAALMDGGNIDL
QLSDDPYDSKQLDIGTAPLLVTLCKIGTKCVVDPSAEEERCSVISLVVGVTGNPNFYQMD
ENDIPNIKCKCSTISMNGPGSLSPKTLKNAIEQGIIAANCLDNALGDALLREKQEIFDFK
KHSYGFLK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctctttaataagtcaatcagagcaagtatttatcgtacatggcgttgaaaat
gatttccgttctgacggcagatcaagtattgactacagaccaatggaactcgaaacggat
gtggtgagccatgcaagtggctcggccaggctgcggcttgcaaacacggatattctagtt
ggagttaagacagaaattgatataccaaaaccagagacacctggccttggcaaaatagaa
ttctttgtggattgttcagctaatgcgacaccagagtttgaaggcagagggggagaacag
ttggctaacactatatcaagcacaatgcagcgagcttactacagcccacaagctttcaat
ttaaaacagctctgtatatttgaaggaaaacagtgttggaaattgtatgttgatatttta
atacttgaatgtggtggcaacctatgtgatgcagtatctcttgcagtcaaggctgcatta
tttaacaccaggttgccgtgtgtgaaagcagcattgatggatggtggcaacattgattta
caattgtctgatgacccatatgacagcaaacaattagatattggcactgctccccttttg
gtaacattatgcaaaattggaactaaatgtgtcgttgacccatctgcagaagaagaacgt
tgcagtgttatatcacttgtagttggtgttacaggaaatcctaacttttatcaaatggat
gagaatgatattcctaatataaaatgtaaatgtagtactatatcaatgaatggccctgga
agtctgtcgcctaaaacacttaaaaatgccattgaacaaggaataattgctgcaaattgt
ttggataatgctcttggggacgcccttttacgtgagaaacaagaaatatttgattttaag
aaacactcatacggttttttgaaataa
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