Papilio machaon (common yellow swallowtail): 106714689
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Entry
106714689 CDS
T05138
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106714689
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106714689
Spliceosome [BR:
pmac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106714689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
R3H
Helicase_C
Ank_2
Ank
Ank_4
DEAD
Ank_5
AAA_19
nSTAND3
HA2_N
AAA_22
AAA_25
NACHT
T2SSE
AAA_14
PhoH
SRP54
Cas3-like_C_2
zf-RING_13
ATPase_2
Motif
Other DBs
NCBI-GeneID:
106714689
NCBI-ProteinID:
XP_014363277
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MSNMNSKRGKKNMGNKHFPIAESVSIALKIQLDKFLNDENETELKFPTFLSAQERGFIHE
TVAKLGLKSKSRGKGVNRYLTIYKRVGSTIIQNDAKLILDSNMRCSIVEMLSSFPLTNKE
RDDLSIGPEKERTSQLTHKVLGHLSNGVAQIPSTTYNPDLVKFREKLPVYEQRQELINAI
THNQVIIVAGATGCGKTTQLPQLVLDWCQEHKQPARIYCTQPRRISAVSVAERVAFERME
KIGQSIGYQIRLESRISPRTVLTYCTNGVLLRTLMAGENSLAGVTHIFVDEVHERDKFSD
FLLIALRDALPRFKDLKLLLMSATCDTQIFSRYFNNCPVVSIPGRLHEVQRYYLEDVLKM
TGYRSRRMLQAERELKQKRANGHSYWNYLEGQKQNVEESNSNVSKDEKENAIDPALQTDM
DEFLEECFKEGSMDSFCQILYMYMSEGVPVQCAQSHSGRTGLMAAAAHGHAETAKHILHI
GADPNYKDKSGKTAYDYAVENGHTECAKLLATFSSNEDTKDNHEEENTADNFLLDVYHHS
ISEELIDHDLMLALIKHIHVNLPKGSILVFLPGYDDIVTLRDLIQSCAEMNVLKYQIFTL
HSNMQTLDQKKVFNPLPNARKIIISTNIAETSITIDDVVYVVDSCKVKEKYYESNGGVCS
LQCVWTSRACCQQRAGRAGRTKPGHCFHMCSKRRFNTLPLNSIPEILRVPLQELCLHTKL
LTISNTPIADFLSKALEPPSFLAVRNAVTLLKTIGALTANEDLTEIGQHLLDLTVEPKLG
KMLLYACVMKCLDPVLTIVCSLANKEPFQISMNPENRKRGSLARKDFASDSYSDHMALLR
AFQAWQMARSNGTERAFCSKNLICGATMEMIVGYRSQLLAQLRALGLVKARGSGDIKDVN
SNSEKWHVVKAVLVGGLYPSIARVDRDTSTLRTSKEVKVAFHPSSTLNRGTGAAGSQKSV
QSLPTDWVVFEEISRAGRFCFIRCNTLVTPLTVALFGGPLRLPAAALCQRANPPGHSSDS
DSEVDDHNSARDSAVLILDDWMAFSADAADAINVFLLRQKLCALVVRRMSNPSKPMTPLD
EQILSTVVHVLGAEEKNVGLSQPSGIGQRPRPHTVDSPSWRLRVDGEEYRHDAGKYYPQY
GQTDYTNNYYQGQNSYGYRNGQRSGGGPGGGGAAWRGEGAQGFSPQPHAAPHAAPHAAPR
SPMSPQGKALLANIEKYAEGAEANTRYFVVKADDVHCVEVAQTTGTFNFSPNTAKKLQKA
RQDGARVVVFFSCANASKFVGCAALADSTLEWICTNNVPYHMVRHISNSLAGNARVVGAR
DGCEMCAGAGRALVTALQQARRARAPPRPIQKHAPDH
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacatgaattcaaagagaggtaaaaaaaatatggggaataaacattttcctata
gccgaatctgttagtatagcattgaaaatacagctagataaatttctaaatgacgaaaat
gaaacagaattgaaatttccgaccttcttatcggctcaagagcgaggtttcattcacgag
acagtggcgaaattgggtttaaaatcaaaatcgcgcgggaaaggtgtgaatcgttactta
acaatatacaaacgtgtgggctccacgattatccaaaatgatgctaagttaatacttgat
tccaacatgagatgcagcattgttgagatgttgtcttcatttcctctgacaaacaaagag
agagacgatttaagtattggcccagaaaaggagagaacatctcagttaactcataaggtg
cttggtcatttgagtaatggagttgctcagattccaagcacaacatataacccagatttg
gttaagttcagagaaaaattacctgtttatgaacaacgacaggaacttataaatgccata
actcataaccaggtgataatagtagcaggtgcaacaggctgcgggaagacgacgcagctg
ccccagctggtgctggactggtgccaggagcataagcagcctgcacgtatctactgcact
cagccacgcaggatatctgccgtctctgttgctgagagggtagctttcgagcgtatggag
aagataggtcagtcgataggttatcagataagattggagtcccgcatcagcccgcgcact
gtcctcacatactgcaccaacggtgtgctgctcaggaccctcatggctggagaaaactcg
cttgcaggtgtgacacatatcttcgtggacgaggttcacgagcgtgacaagttcagtgac
ttcttgctgatagcgctgcgtgatgctctgcctcgcttcaaggacctgaagctgctgctc
atgtcggccacatgcgatacacagatattctcaaggtacttcaataactgtcccgtggtg
agcatcccgggtcgtctgcacgaggtgcaacgttactacctggaggatgtgctgaagatg
acaggataccgcagcagacggatgctgcaggcggagagggaactcaagcagaagcgagcc
aacggacatagctattggaactatttagaaggtcagaagcagaatgtagaagagagtaac
agcaatgtgagtaaggatgagaaggagaacgcaatcgatcccgctctgcagacggatatg
gacgagtttctagaagagtgtttcaaagaaggaagcatggactcgttctgtcagatcctg
tacatgtatatgtcagaaggtgtgcccgtgcaatgtgcacagtctcactccggacgcaca
ggtctcatggccgccgcagcacacggacatgcggagacagccaaacatatactgcacata
ggtgctgatcctaattataaagacaaaagtggtaaaacagcatatgattacgcagtcgag
aacggtcacacggagtgtgcgaaactcttagccaccttcagctcaaacgaggataccaaa
gacaaccatgaggaggagaacacagctgacaactttctgctcgacgtctaccatcactcc
atctccgaggagctgatcgatcacgacctcatgctggctctcatcaaacacatccacgtc
aacctgcccaagggcagcatcctggtcttcctgcccgggtacgacgacatcgtgactctc
agagacctcatacagtcctgcgcagaaatgaacgtgctcaagtatcagatattcactctg
cacagcaacatgcagaccctggaccagaagaaggtcttcaacccgctgcctaacgccagg
aaaataattatttctaccaacatagcggagacgtcgataacgatagacgacgtggtgtac
gtggtggactcctgcaaggtgaaggagaagtactacgagtccaatggcggcgtgtgctcg
ctgcagtgcgtgtggacgtcgcgagcctgctgccagcagcgagctggtcgcgcaggacgc
accaagcccggacactgcttccacatgtgctccaagcgccgcttcaacaccctgcccctc
aactccatccccgagatcctgcgcgtgccgctgcaggagctctgtctccacaccaagctg
ctcaccatcagcaacacccccatcgcggacttcctctccaaggccctcgagccgccctcc
ttcctggcggtgcgcaacgccgtcaccctcctcaagaccataggagccctcaccgccaac
gaggacctcacggagatcggccagcacctcctcgacctcaccgtggaacccaagctcggc
aagatgctgctgtacgcgtgcgtcatgaagtgcctcgaccccgtgctcaccatcgtctgc
agtctcgccaacaaggagccattccagatctccatgaacccggagaacaggaagcgcggc
agtctcgcgcgcaaggacttcgcctccgacagctactcggaccacatggcgctgctccgc
gccttccaggcttggcagatggcgcgctccaacggcaccgagcgcgccttctgctccaag
aacctcatctgcggcgccaccatggagatgatcgtcggctaccgctcgcagctgttggcg
cagctccgcgcgctcggcctcgtcaaggcgcgcggctccggagacatcaaggacgtcaac
tccaactcggagaagtggcacgtggtgaaggcggtcctcgtcggcggcctctacccctcg
atagcgcgcgtggaccgcgacacgagcacgctgcgcacctccaaggaggtgaaggtggcc
ttccacccgagctcgaccctcaaccgcggcaccggcgcggccggctcgcagaagtccgtg
cagagtctgcccacagactgggtggtgttcgaggagatctcgcgcgccggccgcttctgc
ttcatcaggtgcaacacgctggtgacgccgctgacggtggcgctgttcggcggacctctg
cgactgccggccgccgcgctctgccagcgcgccaacccgcccggacactccagcgactcg
gacagcgaggtggacgaccacaactcggcgcgcgactccgccgtcctcatcctcgacgac
tggatggccttctccgcggacgcggcggacgccatcaacgtgttcctgctgcgccagaag
ctgtgcgcgctcgtcgtgcgccgcatgtccaacccctccaagccgatgacgccgctcgac
gagcagatcctcagcacggtggtgcacgtcctcggcgccgaggagaagaacgtcggcctc
agccagcccagcggcatcggccagcgcccgcgcccccacacggtcgactcgcccagctgg
aggctgcgcgtcgacggagaggagtaccggcacgacgccggcaagtactacccgcagtac
ggccagaccgactacaccaacaactactaccagggtcagaactcttacgggtaccgcaac
ggacagcggagcggcggcgggcccgggggcggcggcgcggcgtggcggggcgagggcgcg
cagggcttctccccgcagcctcacgccgcaccccacgccgcaccccacgccgcaccgcgc
agccccatgtcgccgcagggcaaggcgctgctcgccaacatcgagaagtacgcggagggt
gccgaggctaacacgcgctacttcgtagtcaaagcggacgacgtgcactgcgtagaggtg
gcgcagacaaccggcacattcaacttctcccccaacaccgccaagaagctgcagaaggcc
cgacaagatggtgctcgcgtggtggtgttcttctcgtgcgcgaacgcgagcaaattcgtg
ggatgcgcggcgctcgccgactccacactcgagtggatctgcaccaacaatgtgccctat
cacatggtcaggcacatatcgaactccctggcgggtaacgcgcgtgttgtgggcgcgcga
gacgggtgtgagatgtgcgcgggtgcggggcgcgcgctggtgactgcgctgcagcaggcc
cggcgtgctcgggctccgccccgccccatacagaagcacgcccccgaccactga
DBGET
integrated database retrieval system
