Papilio machaon (common yellow swallowtail): 106714776
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Entry
106714776 CDS
T05138
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac04382
Cornified envelope formation
pmac04512
ECM-receptor interaction
pmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106714776
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106714776
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106714776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmac04147
]
106714776
00536 Glycosaminoglycan binding proteins [BR:
pmac00536
]
106714776
Exosome [BR:
pmac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106714776
Glycosaminoglycan binding proteins [BR:
pmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106714776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106714776
NCBI-ProteinID:
XP_014363366
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search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NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagtattgttgtgacgcaggtgctacgacagtgcagtctcactgcgtccctg
gtcataacggtgattaacggggaatccccaaagaacgtcacaaaggcagatatagaaaaa
attatacgagaagcacgtcaatacgatcaaacgtaccctagcgacaatgaagttgtagtt
gatatacaagacgacgagaaaaagcaatactatgaaaccaattacgatacaagtgcatac
ggctttggctacgacgttggtccgaacggccagttccatcacgagaaccgcggcccggac
ggagtgacgtatggttgctatggttacgtcgaccctgacggctacctacgcgctacgcac
tacgtggccgatagtcacgggtaccgcgtggtcgagccggagaagccagtcgaagtcttc
cccgatgagaaacatgaatacgatgaaaatgacgtatctggatcaacaccagccatacct
gggcaaacgataccatgggagaaactgtacttcccgaaaggttgtgggcgtacaccgggt
ggcgtgcccccaaggccgccgccgaaaccgacacgcccgcctcccaccgttgcaccgcgc
cctccgcccgacagcgccggacagacaagcaaccctaaaccaggagtcttgccaccaggt
ggaggtgcttcaaatggacccaatggcccgtatggacccggttattacccgggaactcct
ggctccccggggacaccgggcactccaggcactccaggcactcccggtacaccgggtagt
ccaggctctccaggcactccaggcggacctggtggaccaggcggccccggaggaccaggc
ggacaatatggaccaaaacggaccgtacggaccaggaggtccaatggaccatacggacct
ggaggtcctaacggaccgtatggtcctggaggacctaatggaccaggagggcaaggaggt
tattaccccggcacaccaggcacaccaggcagcccaggaagtcctggcggaccaggcgga
ccaggaggaccaggcggaccaggtggaccaggcggtcctggtggcccaggttcaggttct
ggaggcggttactacccagacaatggacaaggtcaaggtggccctggatctgtaggttcg
ggatcagggcccgtctcaggcggtggatactatccaggcggtggacaaggacaagggccc
agtggacccggtggatccggtgggggatactacccaggcggcggacaaggacaaggaggt
ccagggtcgggaggcggatattatccaggcagtgggcaaggtcaaggaggttactacccg
ggcaccccaggatcgccagggacaccaggtaccccgggcagtccaggaactcccggtagc
ccaggtggtcccggaggacctggcggccccggcggtcccggtggacccggcactgtaggc
ggatccggaagtcccagtgcacctggaggccccaacggccctggtggacctagcggccct
gccggccctaatggtccccaaggccccagtggacccagtggtcctagcggtcccggtact
ggtggcggttattatcctggatctggacaaggtggctactaccctggtacacctggaacc
ccaggaactccgggtagcccaggtggccctggcggccctggaggacctgggggccctgga
ggacccggcggtcccggtggaccaggagggcccggaaacactggatccgacggcagctat
aacccagggagcggacaaggacaacctatagttccgccaactcaacaaggaaaacctcag
cagccagaactaccagacactccaggacaaccaggcactccgggaaaacctggcactcca
ggacaaccaggcactccgggacaaccaggcaaaccgggacagcctggaactccgggacaa
ccgggaactccaggacaacaaggtcaaccaggctacccagggcaacaaggtcaaccagga
tacccaggaaagccaggacagcagggcacaccaggacaaccaggcggacctggatatcct
ggaaaaccaagtcaacctggttacccgggacaaccaggatacccaggagaacagggtcaa
ccaggctacccggggcgaccaggcactccaggacaaccaggaactccgggacaaccgggc
acaccaggacaaacaggcactccaggacagcccggcactccgggacaacccggcggtcct
ggatatccaggacaaccaggaactccggaacaaccaggtcaaccaggttaccctggaccg
tcaggccagcccggatacccaggatcaacagatggcggtgactcagttggccagccctca
ggaaccggagtacaacctccagtatacgctcctgtaaatcagatgccgccattccctata
tacgttataccgtaccctctgcctatcgtgccaagtccttcatcgtgcccgtgctatttg
ctccagccagggaagaatgactcgacagcaatgtcaccgcaacaaggccaaggttacccg
gtaaatcagggatacgctccatatggtatcataggatttatacccgtggtgtttgtaccg
agctgtccggggaatgtaacagatatgcaaaccgcgcagcaaaatttcccgtctgcagta
cctgtgccttacaactgcgcccagtgccaagcgaacaggggcctttacagataccgtgga
agactaaatggcgcacgcaatgtaaacgacttaaaaatgaacgacatcaaattgaacgat
ttacgtgaaatccgtactttgtcggaactagaaactctgttgaaagatcaaataaaacca
acaagccatccagctacccaaccacttatcaaggccaccagtaagacgtcggaccaacca
gacattaaggtgggcaacaagccagacagtgagccggccagcaagccagacagtgagccg
gcgagtaaaatagacagtgagcctgccagccagccagtaagcaacgtacccagtgagccc
cccagccaaccaaggaaaatagcagtacgtcgtaaactaataaaagatgttaaatcaaga
aaaactgtcacgaccttaagttaa
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