Papilio machaon (common yellow swallowtail): 106714776
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Entry
106714776 CDS
T05138
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac04512
ECM-receptor interaction
pmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106714776
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106714776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmac04147
]
106714776
00536 Glycosaminoglycan binding proteins [BR:
pmac00536
]
106714776
Exosome [BR:
pmac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106714776
Glycosaminoglycan binding proteins [BR:
pmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106714776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106714776
NCBI-ProteinID:
XP_014363366
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MKSSIVVTQVLRQCSLTASLVITVINGESPKNVTKADIEKIIREARQYDQTYPSDNEVVV
DIQDDEKKQYYETNYDTSAYGFGYDVGPNGQFHHENRGPDGVTYGCYGYVDPDGYLRATH
YVADSHGYRVVEPEKPVEVFPDEKHEYDENDVSGSTPAIPGQTIPWEKLYFPKGCGRTPG
GVPPRPPPKPTRPPPTVAPRPPPDSAGQTSNPKPGVLPPGGGASNGPNGPYGPGYYPGTP
GSPGTPGTPGTPGTPGTPGSPGSPGTPGGPGGPGGPGGPGGQYGPKRTVRTRRSNGPYGP
GGPNGPYGPGGPNGPGGQGGYYPGTPGTPGSPGSPGGPGGPGGPGGPGGPGGPGGPGSGS
GGGYYPDNGQGQGGPGSVGSGSGPVSGGGYYPGGGQGQGPSGPGGSGGGYYPGGGQGQGG
PGSGGGYYPGSGQGQGGYYPGTPGSPGTPGTPGSPGTPGSPGGPGGPGGPGGPGGPGTVG
GSGSPSAPGGPNGPGGPSGPAGPNGPQGPSGPSGPSGPGTGGGYYPGSGQGGYYPGTPGT
PGTPGSPGGPGGPGGPGGPGGPGGPGGPGGPGNTGSDGSYNPGSGQGQPIVPPTQQGKPQ
QPELPDTPGQPGTPGKPGTPGQPGTPGQPGKPGQPGTPGQPGTPGQQGQPGYPGQQGQPG
YPGKPGQQGTPGQPGGPGYPGKPSQPGYPGQPGYPGEQGQPGYPGRPGTPGQPGTPGQPG
TPGQTGTPGQPGTPGQPGGPGYPGQPGTPEQPGQPGYPGPSGQPGYPGSTDGGDSVGQPS
GTGVQPPVYAPVNQMPPFPIYVIPYPLPIVPSPSSCPCYLLQPGKNDSTAMSPQQGQGYP
VNQGYAPYGIIGFIPVVFVPSCPGNVTDMQTAQQNFPSAVPVPYNCAQCQANRGLYRYRG
RLNGARNVNDLKMNDIKLNDLREIRTLSELETLLKDQIKPTSHPATQPLIKATSKTSDQP
DIKVGNKPDSEPASKPDSEPASKIDSEPASQPVSNVPSEPPSQPRKIAVRRKLIKDVKSR
KTVTTLS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagtattgttgtgacgcaggtgctacgacagtgcagtctcactgcgtccctg
gtcataacggtgattaacggggaatccccaaagaacgtcacaaaggcagatatagaaaaa
attatacgagaagcacgtcaatacgatcaaacgtaccctagcgacaatgaagttgtagtt
gatatacaagacgacgagaaaaagcaatactatgaaaccaattacgatacaagtgcatac
ggctttggctacgacgttggtccgaacggccagttccatcacgagaaccgcggcccggac
ggagtgacgtatggttgctatggttacgtcgaccctgacggctacctacgcgctacgcac
tacgtggccgatagtcacgggtaccgcgtggtcgagccggagaagccagtcgaagtcttc
cccgatgagaaacatgaatacgatgaaaatgacgtatctggatcaacaccagccatacct
gggcaaacgataccatgggagaaactgtacttcccgaaaggttgtgggcgtacaccgggt
ggcgtgcccccaaggccgccgccgaaaccgacacgcccgcctcccaccgttgcaccgcgc
cctccgcccgacagcgccggacagacaagcaaccctaaaccaggagtcttgccaccaggt
ggaggtgcttcaaatggacccaatggcccgtatggacccggttattacccgggaactcct
ggctccccggggacaccgggcactccaggcactccaggcactcccggtacaccgggtagt
ccaggctctccaggcactccaggcggacctggtggaccaggcggccccggaggaccaggc
ggacaatatggaccaaaacggaccgtacggaccaggaggtccaatggaccatacggacct
ggaggtcctaacggaccgtatggtcctggaggacctaatggaccaggagggcaaggaggt
tattaccccggcacaccaggcacaccaggcagcccaggaagtcctggcggaccaggcgga
ccaggaggaccaggcggaccaggtggaccaggcggtcctggtggcccaggttcaggttct
ggaggcggttactacccagacaatggacaaggtcaaggtggccctggatctgtaggttcg
ggatcagggcccgtctcaggcggtggatactatccaggcggtggacaaggacaagggccc
agtggacccggtggatccggtgggggatactacccaggcggcggacaaggacaaggaggt
ccagggtcgggaggcggatattatccaggcagtgggcaaggtcaaggaggttactacccg
ggcaccccaggatcgccagggacaccaggtaccccgggcagtccaggaactcccggtagc
ccaggtggtcccggaggacctggcggccccggcggtcccggtggacccggcactgtaggc
ggatccggaagtcccagtgcacctggaggccccaacggccctggtggacctagcggccct
gccggccctaatggtccccaaggccccagtggacccagtggtcctagcggtcccggtact
ggtggcggttattatcctggatctggacaaggtggctactaccctggtacacctggaacc
ccaggaactccgggtagcccaggtggccctggcggccctggaggacctgggggccctgga
ggacccggcggtcccggtggaccaggagggcccggaaacactggatccgacggcagctat
aacccagggagcggacaaggacaacctatagttccgccaactcaacaaggaaaacctcag
cagccagaactaccagacactccaggacaaccaggcactccgggaaaacctggcactcca
ggacaaccaggcactccgggacaaccaggcaaaccgggacagcctggaactccgggacaa
ccgggaactccaggacaacaaggtcaaccaggctacccagggcaacaaggtcaaccagga
tacccaggaaagccaggacagcagggcacaccaggacaaccaggcggacctggatatcct
ggaaaaccaagtcaacctggttacccgggacaaccaggatacccaggagaacagggtcaa
ccaggctacccggggcgaccaggcactccaggacaaccaggaactccgggacaaccgggc
acaccaggacaaacaggcactccaggacagcccggcactccgggacaacccggcggtcct
ggatatccaggacaaccaggaactccggaacaaccaggtcaaccaggttaccctggaccg
tcaggccagcccggatacccaggatcaacagatggcggtgactcagttggccagccctca
ggaaccggagtacaacctccagtatacgctcctgtaaatcagatgccgccattccctata
tacgttataccgtaccctctgcctatcgtgccaagtccttcatcgtgcccgtgctatttg
ctccagccagggaagaatgactcgacagcaatgtcaccgcaacaaggccaaggttacccg
gtaaatcagggatacgctccatatggtatcataggatttatacccgtggtgtttgtaccg
agctgtccggggaatgtaacagatatgcaaaccgcgcagcaaaatttcccgtctgcagta
cctgtgccttacaactgcgcccagtgccaagcgaacaggggcctttacagataccgtgga
agactaaatggcgcacgcaatgtaaacgacttaaaaatgaacgacatcaaattgaacgat
ttacgtgaaatccgtactttgtcggaactagaaactctgttgaaagatcaaataaaacca
acaagccatccagctacccaaccacttatcaaggccaccagtaagacgtcggaccaacca
gacattaaggtgggcaacaagccagacagtgagccggccagcaagccagacagtgagccg
gcgagtaaaatagacagtgagcctgccagccagccagtaagcaacgtacccagtgagccc
cccagccaaccaaggaaaatagcagtacgtcgtaaactaataaaagatgttaaatcaaga
aaaactgtcacgaccttaagttaa
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