Papilio machaon (common yellow swallowtail): 106715207
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Entry
106715207 CDS
T05138
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmac03036
]
106715207
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106715207
Chromosome and associated proteins [BR:
pmac03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106715207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
106715207
NCBI-ProteinID:
XP_014363921
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MPPDSYLVEVLHYLNPHLIWIEVIDPSVARGDKFVFEQIGIYGVLPVELTLDVEEEDLKT
RVSDEWLPAASVTIKKALAEAKEVKFCPTYIDRRSSIFDDNIHKYGELLVKKRDKKWKPL
SKILIKAGIAIYDMCLFHQQLGLGKLNTRLKSSESEAVIQDIENYYLKKNVSKKNWKKSV
EEKTVVSHATLELESALTTMNLQKHNDVMQQLLQNKLNDFELCKDIDEEPLGKGFKGKQQ
NVARETKAKEALNSNLENNLKATTLKKKLELMTKKSNSQKMDNGFKNNPKQILENTKKFL
ELNATKNLERKLNQEISCKNNKDTFIKGTKNITGLKLPKPISKEYPANEKRVCYGPPGIL
PTKLSVKVLVENVEPPLDSSTCVDNQEKTVEKEDIFANIDSGLNVEITNKNSLMSIKQNV
EIHQKYTDPARFNRRESTSSKGKDSLHLTDRTDSEITVKSSSKVLQKKLMLYERKKTNFL
DSSFTSCSETSNKDSSSLEDVKVRKKENKKEIRDSDDEEVVRKINEEYSIPNVSKELKCQ
NTNTDNNISMKNSVNPFKNIDPTISIFVEKLVTPVLMVHTKMNKRIEPVFNLRDVNFNAN
IQMALKTMSIESPMMLQTISWFCILRGYSTFMISPVGSGKTMGYLPAVCRLVSDIDSDDI
ESVGPKSIIICATAKSVGQVEKMSKMFLNVNNKVVTCFAGVDDALITTSLLNGCDILICT
PSYLVRLLQVTDFGVDLRRLATVVLDDCERLGEVYINELKYIMLRIKETLKNRANKELRV
QYVVASRIWCDFMEPIVKKAPYSVVCIGAFQECVLYSKTGMSVSFVYDNTKMQAVHDFLT
QIDVTKRIVIICDTDDEIFLLKNALRKYKNPVFTCDSSMTIQDLYNLRITWDEYEEPLLG
PILLCCNDTLAHMNVTDAYYLLIYSLPPLFSTFCRWFSVLNDKYPSIFKSDNDIVKIKIL
IEEKNVEQLPKMLNFIRRCTDNTFPQHLNVICKNIMVEKDKAKASKLVPLCNNLLGLGYC
PDYWNCHFRHSFVEDVDNMKEWMPLTGQVTFKILHYHSAVCYSARLLSNTVKDSTKKYPQ
TYSTLSLKMGMYYSKESNKKPHGIPKIGDICAVSLKQNFFARCQVIKILSTYQRGNPNSV
LIKLLDEEKIETTRDIYLYYIPEELKKIETHVVQVRLANIQPKDKDVTYSDLARDQLKRI
TDKDEELYMRGEVAMSIGNCVFVDTLEACQDLASINQTVVKHDFKSDLLEKHAVPNMEHL
DKIKKLCDDKFEVKVKTQTRKSLESTKPKTIGSWAHLDKDNMSLVFFGCALSPSKFFVRL
QKFESCLNMLLKEIQKFVAENPKPLSHVEEGDIVLAMFPDDETFERARIDSIIDNNKVKC
FFVDQGDWREVSTKKIIAMKEEFISKLPFQAIECRLLGVTPAGEEWTDFATNWFSNICFD
VDTDNMKSLYVKCFTKEKAEFTGGNKYGIVMIDTNSDDDIVINQVLIDVNLAKENESEMK
YLDKCETINVSKNSSKSDQLSDSEVEEVEDNESFPMCKTGNVKANNMSTLDTIFKQPIRS
VPLVGSDDSDDSDRWHINMAEDFFKLFKPNTNDSKIKDVKNLSAIMNGTEKDVNTSDDKP
ENSLPKLSQIQNNTKELDSDDYTSPESSDVLNTPDKRVIKSLLVTDNMRKPKVIWRQNKK
FVFIKVNLIGLQMYDVKIEGRAISFAANLNDVDYAFDIELYGAIDVVKSQHWNKGQYILM
KLHKILNKNWLTLTKDGEIRKWIVYDVESIDVSSDEDIIEEHSKKAMLSAIQNIYNKQET
ESEDDDFDDDLNYGYTKK
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgattcgtatcttgtagaggtacttcattatttaaatccacatttgatatgg
atcgaagtaatagatccgtctgttgcgcgaggagacaaatttgttttcgagcaaatcggt
atttacggagttctgcctgtggaacttacattagatgtagaggaagaagacctcaagacg
cgagtgtcggatgaatggttaccggcggcgtcagtcacaataaaaaaggcactggctgaa
gcaaaagaagtgaagttctgtcccacatacattgaccgaagatcttcaatttttgatgac
aacattcataagtatggtgagctattggtaaaaaaacgtgataaaaaatggaagccattg
tcaaagattttaataaaagcaggcattgcaatctacgacatgtgcctttttcaccaacaa
ttaggtttgggcaaattaaacacaaggctcaaaagctcagaatctgaagcagtgatacaa
gacattgaaaattattatttaaagaaaaatgtatccaagaaaaattggaaaaagtcagtg
gaagaaaaaacggtagtgagccatgccacactggaattagaatccgcattaactacaatg
aatttacaaaagcacaatgatgtaatgcaacaattgctgcaaaataaactaaatgacttt
gaactgtgcaaagatatagatgaagagccattgggaaagggtttcaaaggtaaacaacaa
aatgttgccagagaaacaaaggctaaagaagcattaaattcaaatcttgaaaacaatctc
aaagcgacaacattgaagaaaaaacttgaattgatgacaaagaaaagtaatagccaaaaa
atggacaatggatttaaaaataatccaaaacaaatattggaaaatacgaaaaagttctta
gaactgaacgctactaaaaatcttgaaagaaaattaaatcaagaaatatcatgtaaaaat
aataaagacacatttatcaaaggaaccaaaaatattacaggattaaaactaccgaaacca
atctcaaaagaatatcctgcgaatgaaaaaagagtatgttatggaccacctggtatttta
ccaacaaagttatcagtgaaagtattggttgaaaatgttgaaccaccacttgattcatcc
acttgtgttgataatcaagagaaaactgtagagaaggaagatatttttgctaacatagat
tcaggtttaaatgtagaaataactaataaaaactctctgatgagtattaaacaaaatgtt
gaaatacatcaaaaatatactgatcctgcaagattcaataggagagaaagtacttcaagt
aaaggcaaagacagtcttcatttaacagacaggactgattcagaaattacagtcaaatct
tcaagtaaagttttacaaaaaaagttaatgttatatgaaaggaaaaaaacaaattttcta
gacagctcttttacgtcatgttcagaaacatcaaataaagattcatcttctttggaagat
gttaaggttagaaaaaaagaaaataaaaaagaaattcgagattcagatgatgaagaagtt
gttagaaaaattaatgaagagtactctattcctaatgtatctaaagaacttaagtgccaa
aatacaaacactgataataacatatctatgaaaaattctgtaaaccctttcaaaaatatt
gacccgacaatatctatatttgtagaaaaacttgtaactccagtattaatggtgcataca
aaaatgaacaaacgaatagaacctgttttcaatcttagggatgtaaacttcaatgcaaat
atacaaatggctttaaaaactatgtccatagaaagtcctatgatgttgcaaacaatatct
tggttttgtatactacgtggttacagtacatttatgataagtcctgtaggaagtggaaaa
acaatgggttatttgccagctgtatgtcgtttggtatctgatatagactcagatgatata
gaaagtgtaggtcctaaaagtatcataatatgtgcaactgctaaatctgtaggtcaagtc
gaaaagatgtcaaaaatgttcttaaatgtcaacaataaagtggtcacatgttttgcaggt
gttgatgatgcactgataactacttccttgttgaatggctgtgacatactaatttgtaca
ccatcgtatttagtacggttacttcaggttactgactttggggttgatttacgtcgtctt
gcaacagttgtgctcgatgattgtgaaagattaggagaagtttatatcaatgaactgaaa
tacatcatgttgagaattaaagaaactcttaagaatcgggccaataaagagctaagagta
caatatgtcgtagcgtcacgaatttggtgtgattttatggaaccaatagtgaagaaagct
ccatactcagttgtctgtataggtgcattccaggagtgcgtgctatattcaaagacggga
atgtccgttagttttgtttatgataatactaaaatgcaagctgttcatgattttcttacc
caaatcgacgttactaaaagaattgtaattatttgtgatacagatgatgaaatattttta
ttaaaaaatgccctgaggaaatataaaaatccagttttcacttgtgacagtagcatgact
attcaagatctgtataatttgagaatcacatgggatgaatacgaggaaccattgttgggc
ccaattctattatgttgcaatgacactctggctcatatgaacgttactgacgcctactat
ttactcatttattctcttccaccattgttctctacgttctgcagatggttttcagtttta
aatgacaaatacccatctatatttaaatctgacaacgatattgtgaaaattaaaatatta
attgaagaaaaaaatgtagaacagttgccaaaaatgcttaattttattagacgatgcact
gataatacctttccacaacaccttaatgttatctgcaaaaacattatggttgaaaaagat
aaagccaaagcctcaaaattagtaccactttgcaataatttactcggtcttggctattgt
cctgactattggaactgtcactttagacacagttttgtggaagatgttgataacatgaaa
gaatggatgccactaactggccaggttacatttaaaatcttgcattatcactccgcggta
tgttattcagcgagattactttctaacacagtgaaggactcaaccaaaaagtatccacaa
acatacagtacgctttcattaaaaatgggaatgtattatagtaaggaatctaacaagaaa
ccacatggtataccaaaaattggtgacatctgtgcggtttctctgaaacaaaactttttt
gccaggtgccaagtcataaagattttgagcacttatcaaagaggtaatcctaattctgta
ctaatcaaactcttagatgaagagaagattgaaactacaagggacatttacttgtattat
atacctgaagaactgaaaaaaatagaaacgcatgtggttcaagtgagactggctaatata
caacctaaagataaagacgtgacgtattctgatcttgctagagatcaacttaaaaggata
actgacaaagatgaagagctttacatgcgaggagaagtagccatgtctattggaaattgc
gtttttgtagatacattagaagcttgtcaggacttggcgtctataaaccaaactgtcgtg
aaacatgattttaaatctgaccttctagaaaagcatgccgtaccaaatatggaacacttg
gacaaaattaaaaagctttgtgacgacaaatttgaagttaaagtaaagacgcaaactcgc
aaatctttggagtcaacaaaaccgaaaacgattggctcttgggcacatttagataaagac
aacatgtcattggtctttttcggatgcgctttaagtccaagtaaattcttcgtgcgtctt
caaaagtttgagtcgtgtttaaatatgttactgaaagaaatacagaagtttgtcgccgaa
aatcctaaaccattgagtcatgtcgaggagggtgatattgtgttagctatgttcccagac
gacgaaacatttgaaagagctcgaatcgacagtatcattgacaacaataaagtaaaatgt
ttcttcgtcgaccaaggtgattggagagaggtgtctactaaaaaaataatagctatgaaa
gaagaattcatatccaagttgccattccaagcaatcgaatgtagactattaggcgttaca
cccgccggagaggaatggacagatttcgcaacaaattggttctccaatatatgttttgac
gtcgacactgataatatgaaatctttatatgtaaaatgttttacaaaagagaaggctgaa
tttactggtggcaataaatatggtattgtgatgatcgatactaacagtgacgacgatatt
gttataaatcaagttttgattgatgttaatttggcaaaagagaatgaaagtgaaatgaag
tatttggacaaatgtgaaacgatcaatgtgagtaaaaattcttcaaaaagtgatcaactc
tctgattcagaagtagaagaagttgaggataatgaaagttttccaatgtgtaagacgggc
aatgtaaaggcaaacaatatgtccacgttagacactattttcaaacaaccaataagatct
gtacctttggtagggtccgatgattcagatgattcagatcgatggcatatcaacatggct
gaagattttttcaaacttttcaaacctaatacaaatgattctaaaataaaagatgttaaa
aacctttctgcaattatgaatgggacagaaaaggatgtgaacacttccgatgataagcct
gaaaacagtttaccaaaattatcccaaatccaaaataataccaaagaattagattctgat
gattacacgtcacccgaatcatctgatgtcttaaatacaccagataaacgtgtcataaaa
tctctgttagttacagataatatgcgaaaaccaaaagtaatttggcgtcaaaataaaaag
tttgtatttattaaagtaaatcttatcggcctacagatgtatgacgttaaaattgaaggt
cgggcaataagttttgcagcaaatctgaatgacgtagattacgcattcgatatcgaactg
tacggagctatagacgttgtgaaatctcaacattggaacaaaggacaatatatccttatg
aaattacataagattttaaacaaaaactggttgactttgaccaaagatggagaaataagg
aaatggattgtgtatgacgtggagtctattgatgtttcgtctgatgaagatattattgaa
gaacatagtaaaaaagctatgttgagcgcaattcagaatatttataataaacaggaaaca
gaaagtgaagacgatgattttgacgatgatctaaattatggatatacaaaaaaataa
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integrated database retrieval system
