Papilio machaon (common yellow swallowtail): 106715410
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Entry
106715410 CDS
T05138
Name
(RefSeq) regulator of gene activity
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106715410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106715410
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106715410
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106715410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106715410
NCBI-ProteinID:
XP_014364180
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MANLNFQQAPRSLASGVGGVSVGGRVASGLVSGVSGHVTPTFGGALSPGRNSTAMPGGAP
PTMASRSTLFGQRAFADRRVPIPTPLSQANSNSMSSMGNLSRFNTSSNYHSVFGEGGDTS
TPPLLDLSEFPSLTARGAGDQAPAAAPPPPGSKPYIGMVKQPTSEQSEFTMSSEDFPALP
GTSTGGAAVAAGASATGAGGVTATHAPPPQPPTPQALDYTNHNDVKPRKGIQTSPDGKVT
NIPETMIPNQFGIVGLLTFIRAAESNPSLVSLALGQDLTALGLNLNSPDNLYLTFAGPWA
DTPCRPQDLDYHVPPEYLINGAIREKLAPLRLNRYKEDLLFYLFYCFVGDVLQIAAAAEL
YNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVVKEFHLDYSKLEGR
PQLPQLTPQHLLT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaactttcagcaagcacctagaagcctagcaagtggtgtaggtggtgtc
agtgtgggtggcagagtggcatcgggcctggtgagtggagtctcaggccatgtgacacca
acctttggcggggcgctgtcgcccggccgaaactcaacagcgatgccggggggtgcccca
cctaccatggcctcgaggtcaacattattcggtcaacgagcctttgcagatagaagagta
ccaataccaacacctttatcacaagctaattctaattctatgtcaagtatgggtaatcta
tcgaggttcaacacaagcagtaactaccattcggtgttcggcgagggcggggacacgtcg
acgccaccgctgctcgacctcagcgagttcccctcgctaacggcgcgcggcgcgggggac
caggcgcccgccgccgcgcctcctccacccggctccaaaccctatattggtatggtgaag
cagccaacgtccgagcaatcggagttcacgatgtcatcggaggacttccccgcgctgccg
ggcacgagcacggggggtgcggcggtcgcggcgggtgcgagcgcgacgggtgcggggggc
gtgaccgcaacgcatgcgcctcccccgcagccccccacgccgcaggccctcgactacacc
aaccacaacgacgtcaagcccaggaagggaattcagacatcacccgatggcaaagtgacg
aatataccggagacgatgataccaaaccagtttggtattgtgggactgttgacgtttatc
cgtgctgcggagtccaacccgagtctggtctcgttagctttaggtcaggacttgaccgca
ctcggcttgaatttaaactcacccgacaacctttaccttacatttgctggaccctgggcg
gatacgccctgcaggccacaagatttggactaccatgtgccccccgaatatctgataaac
ggagctattagggaaaaattggcacccctacgactgaatcgatataaggaagatctattg
ttctatttgttttactgcttcgtgggcgacgtgctacagatcgcagcggcggcagaatta
tacaaccgcgagtggcggtaccacatggaggagaaggtgtggatctcgcaggcgcccggc
atgcccatggtggagaagacgtccacgtacgagcgcggcacctactacttctttgacgcg
cataactggagaaaggtggtgaaagagttccacctggattacagcaagctggagggacgg
ccgcagctgccgcaactgacgccgcaacatctgctcacgtag
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