Papilio machaon (common yellow swallowtail): 106716332
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Entry
106716332 CDS
T05138
Name
(RefSeq) uncharacterized protein LOC106716332
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106716332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106716332
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106716332
mRNA degradation factors
5'-3' decay
Decapping complex
106716332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec10_N
Motif
Other DBs
NCBI-GeneID:
106716332
NCBI-ProteinID:
XP_014365328
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MADSFFGFNTSFPNLNDDEGGGGPSEDEYDALNDETFGQDSDELDWEVEHEQLAEQLESS
RRHHAHVDDDNLQLEASLSKLVLDEPEPAHLSLGSSVWRHDLSFPTPAAPTPVPPLKNVC
TVEELERQLRQGQVHHQLQQQQQQQVAFPTQNYYQQRFPTMILQRPPGLQAPVPLPFAPQ
QPTGHNNSQMSASLNKIVGQSGQMNQMSQGNQAMQNHMMQNVNSLGQNMSQMTQNTNQLS
QNMNQIGQTINQMTQNNLFMQNNQLNPQFQNNQMGQTMMNQMQHNMQNVHQMSQSNQMLK
NQMGQNMSQMDQTMAQMSQSMNQMNQMNQISQSMNPLGQNMNQNMNQMLSNGSQYGPGMN
QFTHMLGQSRIPPPPGMGMQRQNFSPSMNQFNPNFRGPMTTNKSTEQQTQINQNMMMNQH
LNNQQMVNQKIVKPVMNSQQMTQQNPQQVNSQQLANQQINMQHKNSQQMSLQQMNSQQMN
AQQINAQQMNSQSINSQQINSQPMNSQMNPQQSNVKQMNQQINSKPANTQQMNMQHISPQ
LNSPQNKGNQSALKSVANQRNEKVQKSRVYNNTNTKMMTSQNLAKFLMQSTYPVLPYNSF
HNASHHPMLNRGAVFTNNQFINNHPMFNNQRSNGTFNNVNRHMMNGEDSGAGAEVDEYAG
LMTAREKQWLINIQMLQLNTGTPYIHDFYYTVFLERQANKEKEGVKEAHKANQQNHPFYS
GGVKPETGRERHNSHRHNSSSEEAAPRQYVPTQFENSLGKLQCGSVTAPRKIIDVEVVSA
EPASGRTSRAPSVASTTNPAEVPREVRRTKQLLLDIEALYVTLLRLEELNDPLAIANALI
LKEREEKQKQLEAAQKEAMENEAEDESNLFLKNIESVQRRPKQDSPKSESIDKRQVVNLA
VSQKPAPVKNLLDEDREELLGRMFAALLHADRLPQILAVRKGRALVARFASRAPCGHVRM
RALWARVLRALPHAARRDDGGLAALAPHYRRYIQNTTGWSAVLESCGILAETIDPARTPH
ALTTALTLSCVCAMVEKAASLVNTPEATSSERQWYKFLKSLARALKNTGLAVARPLQPLP
DSKLLHHLKQLDSRSTVEILQRGRTTAEFADLTKADVSEQLVKHLC
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcttttttcgggttcaatacttcttttccgaacctaaatgacgacgaaggt
ggcggggggccttcggaggatgagtatgatgcactcaacgatgagacctttggccaggac
tcggacgagctggactgggaggtggagcacgagcagctggcggagcagctggagagcagc
cggcggcaccacgcccacgtagacgacgacaacctacagctcgaagcgtccctgtccaag
ttggtgctggacgagccggagccggcgcacctctccctgggctcctccgtgtggcggcac
gacctctccttccccacacccgccgctcccacacctgtgccaccgctcaaaaatgtgtgc
acggtggaggagttggagagacagttacgccagggccaggtgcatcaccagctgcagcag
cagcagcagcagcaggtcgccttccccacacagaactactatcagcaaaggtttccgacc
atgattttacaaagaccgcccgggctccaggcgccggttcctctgccgtttgctccgcag
cagcccacaggacacaataacagtcagatgagcgcgtcattaaataaaatcgtcggccaa
tccggacaaatgaaccaaatgtctcaaggaaatcaagcaatgcaaaaccatatgatgcaa
aatgtcaactcattgggtcaaaatatgagtcaaatgactcagaataccaaccaactgagt
cagaatatgaatcaaattggccaaactatcaaccaaatgacacaaaacaacctattcatg
caaaacaatcaactgaatccccagtttcagaataatcaaatgggacagaccatgatgaac
caaatgcaacataacatgcagaatgttcatcaaatgagccaatccaaccagatgttaaaa
aaccagatgggacagaatatgagccaaatggatcaaactatggcgcaaatgagccaaagt
atgaaccaaatgaatcagatgaatcaaataagtcagagcatgaaccctttggggcagaat
atgaaccagaacatgaaccagatgttgtcaaatggcagccagtacgggccgggaatgaac
caattcactcatatgctgggccagtcccggatccctccacctccgggaatggggatgcag
cgacaaaattttagtccaagtatgaaccaatttaatcctaattttcgtggcccaatgaca
actaataagtcaacagaacaacaaacacaaataaatcagaatatgatgatgaaccaacat
ctaaataatcaacaaatggtaaaccagaagattgtcaaacctgtaatgaactcccagcag
atgacacagcaaaacccacagcaggtcaactcacagcagctggccaatcagcaaattaat
atgcagcataaaaactcccagcaaatgagtctacagcaaatgaattcgcagcaaatgaac
gcgcaacaaataaatgcacagcaaatgaactcgcaatcaataaactctcagcaaataaac
tcacaacctatgaattcgcaaatgaatcctcagcagtccaatgtgaagcaaatgaatcag
caaataaactcaaaaccagcgaacacacagcaaatgaacatgcagcacatctcgcctcag
ctgaactctccacagaacaagggcaaccagtccgccctcaagtcggtcgccaaccagagg
aacgagaaagtccagaagagccgagtgtacaacaacacaaacactaagatgatgacgtca
cagaacctggccaagttcctgatgcagtcgacgtaccccgtgctgccatacaacagcttc
cacaacgccagccaccaccccatgctgaaccggggggccgtgttcaccaacaaccagttc
atcaacaaccatcccatgtttaacaatcaacgctccaatggcacatttaataatgtcaac
agacacatgatgaacggtgaggacagcggtgctggtgcagaggtggacgagtacgcgggc
ctgatgacggcgcgcgagaagcagtggctcatcaacatacagatgctgcagctcaacacc
ggcactccatacatacatgacttctattacactgtattcctcgagcggcaagcgaacaaa
gagaaagagggtgtgaaagaggcccacaaggctaaccagcaaaatcatcccttctacagc
gggggggtgaagccggagacgggtcgggagcggcacaactctcaccgacacaactctagc
agcgaggaggccgcgccccgacagtatgtgcccacgcagtttgagaactcgctcgggaaa
ctgcagtgcggcagtgtgacggcgccgcgcaagataatagacgtggaggtggtgtctgca
gagcccgcgtccggccgcacctcgcgcgcccccagcgtcgccagcaccaccaaccccgca
gaggtgccgcgcgaggtgcgccgcacgaagcagctcttgctggacatcgaggcgctgtac
gtaacgctgctgcgtctcgaggagctcaacgaccccctcgccatcgccaacgcactcata
ctcaaggaaagagaagagaagcagaagcagctggaagcggcccagaaggaggcaatggag
aacgaggcagaagacgagtccaacctgtttctcaagaacatagagtcggtgcagagaagg
ccgaagcaggacagccccaagagtgagagcatagacaagagacaggtggtgaacctggcg
gtgagtcagaagcctgcgccggtgaagaacctgctggacgaggaccgcgaggagctgctg
ggccgcatgttcgccgcgctgctgcacgccgaccgtctgccgcagatactggccgtgcgc
aagggcagggcgctggtggcgcggttcgcgagccgcgcgccgtgcgggcacgtgcgcatg
cgtgcgctgtgggcgcgagtgttgcgcgctctgccgcacgccgcgcgccgggacgacggc
ggactggccgcgctcgcgccgcactaccgcaggtacatccagaacacgacgggctggtct
gcagtgctggagtcgtgcggcatcctggcggagaccatcgaccccgcgcgcactccgcac
gccctcaccacggccttgactctgagctgcgtgtgcgcaatggtggagaaggcggccagc
ctggtgaacacgccggaggcgacgtccagcgagaggcagtggtacaagttcctcaagagc
ctcgcgcgcgccctcaagaacaccggcctcgcggtcgcccgccctctgcagccgctgccc
gactccaagctgctgcatcacctcaagcagctcgactccaggagcaccgtcgagatcctg
cagcgaggcagaaccaccgccgagttcgcggacctcaccaaggcggacgtctccgagcag
ctcgtcaaacatctctgctga
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