Papilio machaon (common yellow swallowtail): 106716461
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Entry
106716461 CDS
T05138
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106716461
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106716461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
106716461
NCBI-ProteinID:
XP_014365465
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MDEIEYKLKTNNSVLIVNAIDKLISTIKSKYQPAERQKFVLENEELKFLREKCSSENTLV
SLTAYQGLLALVEFGVLEIGHTMSTVITLLSTAHNYSATISTMAGLLILDLRSRLIPGQP
YKCQFSLKSPQHPLISVLEKNKEAEDDVLAQMHALCTHPEYKISSNSLELLHSVFFWLLC
NPQRQSASIRPWQMLLSLPQTTAQSALLLHCVSCQQMCNPAMLERAFAAYSAVTDTFIYQ
QRRDYVMALLPLLARISNEMLKHGRDPRACYSLIERCFALEAPELRTVAGFTVLLLADNL
TQSSALYLHELFNLCLNIISKYEYSALSLNAFAALSLQWLHLPSYLTTNALKVASSILDI
YQSGNKEDSGLYMPNLKANKIFQTLLYTDGHLYKMFKVIETWERVRDDPKKLIQWFELLI
KSNNNLKIDILPFFVGLIFEKRKEEFDDVMLKAIRVIIELVDVKKDLSVAVLPILMYVIA
NDPRPHVKLECLRGLPLMAKTKENVPTIVNILNKLKTNKGVPTSVLIMLYTSLAETQVRC
FPYLQELLLEQRSGRPVSSSILNRCTDRGGAAATSLSLSALAALWRGAALAPPGTWRALE
PRLARDSRTQVQISLCKLLGEIPALRVSSPEYDRLVSEAARWLWRHLAEAQHPALAEAAC
DALATFKLEDFKLADVPEIYRSTVRLPASYCKTPADAARKPEEVLDYIPCEVWGEVFRCS
SVGALVGVGRLARALVGAEVRAYRGGLYNTEGRGEPHSYTHLVPGSVLRGLMDCFRKQVT
SPSFEYSDTVLLAILETLTLEYPKPLPPIDLCFVHEALHRGPAWRALCLKLAARQAPVSP
SARRLLDNFLLAVQPGKCHEADIMLVFENLHILCRGMPPNALRGPIERCLGDSFSSLPKT
VREGEEPLFIQQLRYMREALACDRIHDANRTLLSQIIETYFNVIPEDSVSWDAYLECCEL
LSSKYLERMTSPSGWWEVSAGALVRACRVRAALAAAADCRAPLLWLNEIIDACAQLISVQ
EYSLLCMLPALQAAPPDAETTKDWLLQLMARTQVAFKETEDISEAVPV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattgaatataaactaaaaaccaacaatagtgttttaattgttaatgccatt
gacaaattaatttccacgataaaatccaaatatcagccggctgaaagacaaaagttcgta
ttagagaacgaagaacttaaatttctcagagaaaaatgttcttcggagaatactcttgtc
agtctcactgcataccagggtctactagctctggtggagtttggagtgttagaaattggg
catactatgtctactgttataactttactttcaactgcacacaactactctgcaacaata
tcaacaatggctggtctgttaattctcgacttacgatcgcgtcttatccctggtcaaccg
tacaaatgtcagttctctcttaagtctccgcagcatcctcttatatctgtgctggagaaa
aataaagaggctgaagatgatgttcttgctcaaatgcatgcattgtgcacacaccctgag
tacaagatatcatcgaatagcttagaacttctccattccgtgttcttctggctgttgtgt
aatcctcagcggcagagtgcaagtatcaggccgtggcaaatgttgcttagcttgccacag
acaactgcccagtcagcacttctacttcactgtgtctcctgtcaacagatgtgcaatcca
gcgatgttggagcgggcattcgcagcgtatagtgcggtaacagacacattcatataccag
caaaggcgtgattacgtgatggcactgctgccactgctcgccaggatatccaatgaaatg
ctgaaacatgggcgtgacccccgtgcgtgttatagtctgatagagaggtgcttcgccctt
gaggcgcctgagctgcggacagtcgcgggtttcactgttctactgttggctgacaacctc
acacagagctctgcactgtacttacatgaattgtttaacttgtgtctaaatataataagt
aaatatgaatactcagcgttaagtttgaatgcatttgctgcgttatctctacaatggctc
catctgccttcgtatttaacaacaaatgctttaaaagttgcttcaagtatacttgatatt
tatcaaagtgggaacaaagaagacagtggtttatatatgcctaatttaaaagcaaataaa
atatttcaaactttattatacacagacggacatctttacaaaatgtttaaagttattgaa
acatgggaaagagttagagatgaccctaaaaaattgatacaatggtttgaattattaatt
aaatcaaataataatttaaaaatagatattttacctttctttgttggtttaatatttgaa
aagaggaaagaagaatttgacgacgttatgttgaaggcaataagggtcataattgaactt
gttgatgtgaaaaaagatttgtcagtggcagtactgcctattttaatgtacgtgatagcg
aacgacccacggcctcatgttaaactggaatgcttgaggggtctacctttaatggctaag
acaaaggaaaatgtgccaacaatagttaatattttaaataaattgaaaacaaataaaggt
gtgccaacttctgttctaataatgttgtatacaagtctagctgaaacacaggtgcgttgt
ttcccgtatctacaagagttgttgttggagcagcgctccggccgacctgtgagttcgtca
attctgaacaggtgtacagatcgtggcggtgcggcggccacttcgctgtcgctgagcgcg
ctggcggcgctgtggcgcggcgccgcgctggccccgcccggcacctggcgcgccctcgag
ccccgcctcgccagggactcccgcacacaggttcagatcagtttatgtaagctgctgggg
gagatccccgcgctgcgtgtgtcaagtccggagtacgaccggctggtgagtgaggcggcg
cggtggttgtggcgacacttggcggaggcgcagcaccccgcgctggcggaggcggcctgc
gacgccctcgccaccttcaaactggaagacttcaagctcgctgatgtaccagagatatat
agaagtacggtgcggctgccggcgtcgtactgcaaaaccccggctgatgctgcgaggaaa
ccggaggaggttcttgactatataccatgcgaggtgtggggcgaggtgttcagatgcagc
agcgtgggcgcgctggtgggcgtggggcggctggcgagggcgctggtgggggcggaggtg
cgcgcctaccgcggcgggctgtacaacacggagggccgcggggagccgcactcctacact
cacctggtgcccggcagcgtgctcagaggtctcatggactgcttcaggaaacaggtcaca
tctccctcgttcgagtattcggacacggtactcctggccatcctggagactctgaccctg
gagtacccgaagcccctgccccccatagacctgtgcttcgtgcacgaggcgctgcaccgc
ggccccgcctggcgcgcgctctgcctcaagctggccgcgagacaggcgcccgtctcaccc
tcagcacgacgactgttggacaactttctgctcgctgtgcagccggggaaatgtcatgaa
gccgacataatgttagtatttgagaacttgcacatcttatgccgcggcatgccgccaaat
gcgctgcgcgggccaatagagcgttgtcttggcgactcattctcctctctgcctaagacg
gtaagagagggagaggagcccctcttcatccagcagctgcggtacatgcgggaggccctg
gcgtgtgacaggatacacgacgcgaacaggactttactctcgcagatcatagagacctat
tttaatgttatacctgaagatagtgtgtcgtgggatgcgtacttggagtgctgcgagctg
ctgtccagcaagtacttggagcgcatgacgtcaccgagcgggtggtgggaggtgagtgcg
ggtgcgctggtgcgcgcgtgtcgcgtgcgcgccgcactggccgcagccgcagactgccgg
gcgccactgctctggctcaatgagatcatcgacgcctgcgcacaactcatctccgtacag
gagtactctcttctgtgcatgttgcccgcgctgcaggcggcgccgcccgacgccgaaacc
actaaagactggttgctgcagctgatggcgcgcacgcaggtcgccttcaaagagaccgag
gatatcagcgaagctgtacctgtgtga
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