Papilio machaon (common yellow swallowtail): 106717299
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Entry
106717299 CDS
T05138
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106717299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106717299
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106717299
mRNA degradation factors
3'-5' decay
Pan complex
106717299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
106717299
NCBI-ProteinID:
XP_014366609
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MDPSIYMQYSPPNGLPQESKLATYMNHSATTPTRSLNQSMGQLSLESSPPAMRKVFISEY
VPMNYFTLPPPPTNVLPESPENSPPSTMVPVPNMQVHQIFLSVYDKQENVGGTTYFYSTN
DGLNTSGALNSSASLANSESCRGGNPGPSASSSYASQMFCNTPTHMVPGPMISKPGPDPG
LGVSGGPSQSSGYSSQMFCSTPTHMGPNLMVPKPVGAEACRGAGAVPSASSSYASQMFCS
TPSHMVPGPMISKPAGAEQMMGASGGPSPSSGYPSQMYCSTPTHMGPSPIIPKSGLAESF
YMPETIKAETYQRNKDIFLMPYQYIELPENVEMYSDLVPLEGVGPHSLTSSYRAAHRQSG
EHIALRRLHAYSAMPSPRLDLWKQLDHPNVVRLQECFTTVAFGDNSLVMVYDYHPGCETL
MSKYIRNNGAGNSSDSNGTLHDPFSSDPDAPRPYTHQKNAMLRALACGALLPEAVLWSFL
VQLTAALRAIHTAGLACRTLDPSKVVMNGCRVRISWCGTADVIEHHNSIDIIQAQQDDLV
ALGRLALALACRSMHCDNLAASMDLVSRTYSADLQNLIIFLLTKSPGRRTVTDLMPMIGA
RFYTQVEALERRADVFEEQLAHEMDNGRLLRILIKLGVVNERPELNMDPEWSETGGRYML
KLFRDYVFHSVTEDGRPWFDQAHLTYCLNHLDSGSNTKVVLMSRDEQSVFVVTYAELKHC
LEQAVEEVLQSAFL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacccctcaatctatatgcaatactcacctcccaatggactacctcaggaatccaaa
ttggccacatatatgaatcattccgccaccactcccacaagatctttgaaccagtctatg
ggtcagctcagtttggagtcttctccacctgccatgagaaaggtatttataagtgaatat
gttcccatgaattacttcactttaccaccacctccaacaaatgttttacctgagtctcca
gaaaactcgccaccttctaccatggtccctgtgcccaatatgcaagtacatcagatattt
ttaagcgtctatgataaacaggagaatgttggtggtacaacatacttttattcaacaaat
gatggcctcaatacttccggagccctgaattcttcggcttccttggctaattcggaatct
tgccgtggaggtaacccaggcccgagtgcatcttcatcatatgcatcacaaatgttctgt
aataccccaactcatatggtgccaggcccaatgatatctaagcctggtccggatccgggc
cttggagttagtggtggtccgagtcaatcttccggatattcctcccaaatgttctgcagc
actccaactcatatgggaccgaatctgatggttcccaagcctgtcggggctgaagcttgt
cgtggcgctggtgcggtgcctagcgcctcatcatcctacgcctcccaaatgttctgtagc
actcccagtcacatggtgccaggcccgatgatttccaagcctgcaggagcagaacagatg
atgggagctagtggaggtccgagcccatcttcgggctacccatcgcaaatgtattgcagc
actccgactcacatgggtccaagtcccataatacccaagtccggtcttgctgagtcattc
tacatgccagaaactattaaagcggagacataccagaggaacaaagatatatttctgatg
ccctatcaatatatagagttaccagagaacgtggagatgtattcggatttggtgccatta
gagggtgttggaccccactcgttgacatcatcgtatcgtgctgcccaccgtcagagtgga
gagcatatagctctgcgccgtcttcacgcgtactccgctatgcccagtcctcgccttgat
ctctggaagcagttggaccatcccaatgtcgttagactccaggagtgcttcactactgtg
gcctttggagataactcattggtgatggtgtatgattatcatcctggctgtgagacactc
atgagcaagtacatacgtaacaatggcgctggtaactcttctgactccaatggcacttta
catgatccattctcctctgatccggatgcaccgcgtccttatactcaccagaaaaacgct
atgctccgtgctttggcttgtggtgcattactcccggaggcggttctgtggagtttcctc
gtgcagttgacggccgccttgcgcgccatacacactgctggactcgcttgcaggacattg
gatccatccaaggtagtgatgaacggatgtagagtgcgcatttcctggtgcggtactgct
gatgtcatcgaacatcacaattccatagacatcatacaggcccagcaggatgatttagta
gctctgggtcggctggcccttgctctcgcgtgccgctcaatgcattgcgataatctcgcc
gcctccatggaccttgtctccagaacttattctgctgatctgcagaatttgataatattc
ttgttgacgaaatctcccggccgacgcaccgtaactgatctcatgccgatgataggcgcc
aggttttatactcaggtggaagctttggagcgtcgtgccgatgtttttgaagagcaattg
gcacacgaaatggataacggtcgcctcttgaggatcctgatcaaacttggtgttgttaat
gaacgtcccgaattgaacatggacccggagtggtcagagactggtggtcggtacatgctg
aagttgttccgtgactatgtattccactcggtgactgaggatggaagaccttggttcgat
caggctcatctgacgtactgtctcaaccatcttgacagtggtagcaacactaaggtggtg
ctgatgtctcgtgatgagcagagtgtgttcgtggtgacatatgctgagctgaagcattgc
ttggagcaggctgttgaagaggtgctgcagtcggccttcttgtga
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integrated database retrieval system
