Papilio machaon (common yellow swallowtail): 106718028
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Entry
106718028 CDS
T05138
Name
(RefSeq) ribonuclease Z, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmac03016
]
106718028
Enzymes [BR:
pmac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
106718028
Transfer RNA biogenesis [BR:
pmac03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
106718028
Prokaryotic type
106718028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
106718028
NCBI-ProteinID:
XP_014367504
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MYGKLVLFHSVVRFNNYTVRHYQKKKTQRLLEFLADMPKPNTSRIMDAQRQRQQISKKAQ
NYVPSTIYLQVVGSGARGVPNTLYLFTDQKRYLFNCGESTQRLSHEHKVKLTRLDHIFIT
NKTWKNIGGLPGLSLTLQDVGVPNITLHGPEGLDELYKATKRFVIMKDMNVTLAPCSPSE
DFVDNVMTVKYVLLRSFKPGGMVTPFLRLVVASFPVLFPHSTVRAGGVQKQQKADEKRQV
LEVPDISYLTMDDFSSHYDNGVNPMENIPAVVVHFTPPHVFRHPIYRMFISKFGPTTHHL
VLNEDNTCLGSEAVHRTQHRLHVLDADVFPLLRDASIPAMWKSQPPTEGTVGKANCLEEL
KNRIAFAQFQNIIRMEETNKDSTSECPETKYNFITARTLTMFHLRPKKCLDSVLRKIVLF
NEEFHMQGNCDDTLIKIQPLLIKLTFAPLTGLIGVLQARREAFSEQSRVPYEPVQLLAPG
QIVTWLLLYDQQFESIREDYALITNQSLLEAKSNSLGTEMTPASLSRIGVQHIRTCLVAH
CPNAFGVAIDVDGKHKITYSGDTIPCKELVTIGQNSTLLIHEATMEDELAEEARIKMHST
TSQAIHIGREMNAKYTVLTHFSQRYARLPRLSAHILHDNNSVGVAFDNMQIRMKDLELLP
YMYAPLQLMFAEHCVELEVKAAHRARRRERGTGSPPPAGKHTHYSLPGDAPPATDVPTPA
APATTSHDSDKQLDSIDDVTVQTNDQCKIVETKMESSYWRPQIPSKAEAVRVPERIKSVN
FIKTRGACTTFLSSNLPNTPRTRSNLLNRVASTTISNGQKSFVPTRVTSLPTKLPRPTNM
VQSIESRPRFNCSPRIVDTNITAKKVPSENLKMKYKFSSKLSEKTNLNQSLQNVSIKKVF
TPVNEPNIQEKQTRRRNQIETLKNTFCREAHDIPALTSNYASSANAKRYKPQLEDIKSSY
LLLNKKNVINRNIDVISNDCKNHAIPKPEPLNEIKRRQQLIRAREKYKSKKYWNESKYKC
IEGLNWISWK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtaaattagtgttgtttcattctgtagttagatttaacaattatacagttcgt
cattatcaaaagaaaaagactcaaaggctgttggaatttttagccgacatgcctaaaccg
aatacgtcaagaattatggacgcacagcgtcaacggcagcagatttccaaaaaggcacaa
aactatgttcccagtacaatatatctacaggtagtgggttctggtgcacgtggagttccc
aatacattatatctttttacggaccaaaagcgatatctttttaactgtggtgaatcaaca
caacggttatctcacgagcacaaagtgaaactaacaagattagatcatattttcataaca
aataagacttggaagaacattggtggattaccaggtctttcactaactcttcaagatgtt
ggagtacctaatattactttacatggtcctgaaggtttggatgaactttacaaagccact
aaaaggtttgttataatgaaagacatgaatgtaacattagctccctgcagcccctctgaa
gattttgttgataatgttatgactgttaaatatgttttgttgcgttccttcaagcccggg
ggaatggttacgccgtttttgcgtttggtcgttgcatcctttcccgtccttttcccgcac
agtacagttcgagctggaggtgtccagaagcagcagaaggccgatgaaaagagacaagtg
ttagaagtgccagatatatcatacctaacaatggacgatttctcttcgcattacgataat
ggagttaatcctatggaaaatatacctgccgtggttgttcatttcacacctccgcatgtc
ttccgacatccaatttaccgaatgttcatatcaaagtttggtccaaccacacaccacctg
gtactgaatgaggataacacgtgtctgggatcggaagctgtacatcgcactcagcaccgg
ctgcatgtgctggatgcagacgtgttcccattgctgcgtgacgccagtatacccgccatg
tggaagtctcagccccccactgaagggactgtgggtaaagctaactgtctcgaggaactt
aagaatagaatcgcattcgctcagtttcaaaatataataagaatggaagagacaaacaag
gatagtacgtctgaatgtccggagaccaagtacaactttatcacggccagaactctcaca
atgtttcatttgaggccgaaaaaatgtctagatagtgtattacgaaagattgttcttttt
aatgaagagttccacatgcagggaaattgtgacgatacgctgattaaaatccaacctctt
ttgataaagttaacctttgcgccgctgacaggtctaataggcgtgctgcaggcgcgtcgc
gaggcgttttctgaacagagccgggtgccatacgaaccggtgcaacttctcgcaccagga
cagatcgtaacctggctgctactctacgaccagcaatttgagagtatacgtgaagattac
gcgttgattaccaatcagagcttgttagaggcgaaatcaaactccttaggtacagagatg
acaccagcatcactatctcgtattggcgtacagcacatccgcacttgtcttgtggcgcac
tgtcccaacgcatttggcgtcgcaatcgacgtcgacggcaagcataagatcacctactct
ggtgataccataccctgcaaggaacttgttacaattggacaaaattctactctgttgatc
cacgaggcgacaatggaggatgagttagcggaggaggcgcgcatcaagatgcattcgact
acatctcaggcgatacacatcgggagagagatgaatgccaagtacactgtgctcacccac
ttcagtcagcggtacgcgcgtctgccgcgactcagcgcccacatactgcatgataacaac
agcgttggtgtcgcatttgataatatgcagataaggatgaaggatttagagttactgccg
tacatgtacgcaccgctgcagctcatgttcgcggagcattgcgtcgagctcgaagtgaaa
gcggcgcatcgtgcgcgcagacgcgagcgcggcaccggcagcccgccacctgccggtaaa
cacacacactactcactacccggtgacgcgccgcccgcgacggacgtccccactcccgcc
gctccggcaacgacatctcacgacagcgacaaacaactggactcgatagacgacgtaacc
gtacaaacaaatgatcagtgtaaaattgtagaaactaaaatggaaagtagttattggcga
ccacaaataccaagtaaagctgaagcagttcgcgtacccgaacggataaagagtgtgaat
tttataaaaactcggggtgcttgtaccacgtttctcagctccaatctcccgaacacaccc
agaactaggtctaacctcctcaaccgtgttgcaagtaccacaatttctaacggtcagaag
tcttttgtaccaacaagagttacaagtttaccaaccaaactaccaaggccaaccaatatg
gttcaaagcatagaatctcgaccacgatttaattgtagtccaagaatagtagatacaaat
atcaccgccaagaaagttccttcagaaaatctcaaaatgaaatataaattttctagtaaa
cttagcgaaaaaacgaatcttaaccagagtttgcaaaacgtgagcataaaaaaagtattt
actccagtcaacgaaccgaacatacaagaaaagcaaacaagaagaagaaatcagattgaa
acactaaagaatacattctgtcgagaagctcatgatataccggctttaacaagtaattat
gcaagttccgctaatgctaaaaggtacaaaccacaattagaagatatcaagagttcatat
ttacttttaaataaaaagaacgtcattaatagaaatattgatgtcataagcaatgattgc
aaaaatcatgcaataccaaagccggaaccattgaatgaaataaaaaggagacaacaatta
ataagagcgagagagaagtacaagagtaaaaaatactggaatgagtcgaaatataaatgc
attgaaggtctcaattggatatcatggaaataa
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