Papilio machaon (common yellow swallowtail): 106718406
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Entry
106718406 CDS
T05138
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106718406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106718406
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106718406
Spliceosome [BR:
pmac03041
]
Complex C
Other components
Step II factors
106718406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
S1
Helicase_C
WHD_HA2
OB_NTP_bind
DEAD
AAA_22
AAA_19
GIPC1_GH2
AAA_30
Flavi_DEAD
nSTAND3
nSTAND_NTPase5
ResIII
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
106718406
NCBI-ProteinID:
XP_014367963
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLAEKNPTFDAFKKSLIENGAEFS
DSFMTNLLRIIQHMKPVNSVDKNEKSISGSNPLASKFPGLAIPNEKPPVFSSDESSDDDD
KKIKNERITNKDLFKEEAKVKESSGNVIEEAMAELEALAPSNLNIKKEEKRDIIKDHSDS
KVKRDRSRERNRKRSRSRDRRSKTPERRNRSRDRDKDRRRRSRSRHRHRSRSRDRNRRSR
SRGRRSRSRGRRSRSRGRRSKSRSRSRDRHREDSYRFRDFEKRKKKSPEVEMSDDPEPGK
IYNGRVANIVPFGCFVQMEGLRKRWEGLVHISQLRAEGRVTNVSDVVSRGDKVKVKVLSI
TGQKVSLTIKDVCQETGKDLNPTSHAHLEAEREGRNPDRPAPAATVLAGLQGNLDPDEDS
SRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEETGLLPKDEDGEADIEIELVEEEPP
FLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMESLPTGLNK
NWIDPLPEADGRALAANMRGSGITPQDLPEWKKHVIGGKKSSFGKKTNLSLLEQRQSLPI
YKLKDELIKAVADNQILIVIGETGSGKTTQMTQYVAACGLAARGKVACTQPRRVAAMSVA
KRVAEEFGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMDLDLKSYSVIMLDEA
HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL
YTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPEL
IILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS
KTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLAT
TLALEQLHSLSALDSEGLLTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSV
QNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKR
AQDVRKQLLGIMDRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVY
IHPSSALPVKYRETSHSTPVLKTD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgcaaaattagaacatctctctttagtttctaaaatttgtacagaattg
gataaccatttaggactaaatgacaaagatctagctgaatttattattgacttggcagaa
aaaaatccaacatttgatgcatttaagaaatctctcattgagaatggggctgagttttca
gactcatttatgacgaatttgcttcgcattatacagcatatgaagccagtcaattccgtt
gataaaaatgaaaaaagcatatcaggttcaaacccactggcatctaagtttcctggtttg
gcaattcctaatgaaaaaccaccagtattttcatccgatgagagcagtgatgacgatgat
aaaaagataaaaaatgaaagaataacaaataaggatttatttaaagaagaagcaaaagta
aaagaatctagtggtaatgtgatagaagaagctatggcagaattagaggcattagcacct
tctaatttaaatatcaagaaggaagagaagagagatatcattaaggatcacagtgacagt
aaagtcaaaagggacagatcacgtgaaagaaatagaaaacgtagtagaagtagggacaga
agaagtaaaactcctgaacgtaggaatagaagtagagaccgtgacaaggacagaaggaga
cggtccagaagtcgtcatcgtcacaggtcaaggtctagggacaggaataggagatcaagg
tctagaggtaggaggtcaagatctcggggaagaaggtcaagatccagaggcagaagatcc
aaatctaggtcacgatcacgtgacaggcatagagaagatagttataggtttagagacttt
gaaaagagaaaaaagaaaagtcctgaagttgaaatgagtgatgatcctgaaccaggaaag
atatataatggaagagtagcaaacatagttccatttggttgttttgtacaaatggaaggc
ttgaggaagagatgggagggcttggtgcacatctcacagttgcgtgccgagggcagagtc
accaatgtctctgatgttgtctccaggggtgataaagtcaaggttaaagtgctgtcaata
actggccaaaaagtgtctctgaccataaaagatgtatgccaagaaactggaaaagatctg
aatccgacatcacatgcacatttagaggcagaaagagagggtcgtaacccagatagacct
gcccccgccgctacagtcttggcggggctgcaaggtaatctggatccagatgaagattcc
agtcgcaagcgcgtcacaaggatctctagtcctgaacgatgggaaattaaacagatgatc
tcatctggtgtaatcgataaaagtgaactacctgactttgatgaggaaacaggtctacta
ccaaaagatgaggacggagaagctgatatagaaatagagttagttgaagaggaacctcca
ttcttacaaggtcatggccgagcacttcatgatttgtcgccagtaaggatagtcaagaac
cctgacggctcactggcacaggccgcaatgatgcagtccgctttagcaaaagaaagaagg
gaacagaagatgttgcaaagagaacaagaaatggaaagtttaccgactgggctgaacaaa
aactggatagatccccttccggaggctgatgggcgagctctggcagcaaatatgagaggt
tcaggaataacaccacaagatctacccgagtggaagaaacatgttattggcgggaaaaag
tcgtcttttggtaaaaagactaacctatcactattggaacagagacaatcgttacctatt
tacaaattgaaggatgaactaatcaaagcggtagcagacaaccagatcttgatagtgata
ggtgagacgggttcaggtaagactactcagatgacgcagtatgtggcggcgtgtggtctg
gcagcgcgaggtaaggtggcgtgcacgcagccacgtcgtgtcgccgccatgtctgttgct
aagcgtgtagctgaggagttcggctgtcgacttggacaggaagtcggctatactatacga
tttgaagattgtaccagccctgagactattattaagtacatgacagacggtatgttgctc
cgagaatgcctgatggatttagacttgaagagttactcggtgatcatgctggacgaggct
cacgagcgaaccatccatacagacgtcctcttcggtctgctcaagcaagcggtgcagaag
aggccagagttaaaactcattgtgacctcagccacattggacgctgttaaattctctcaa
tatttctttgaagcacccatctttacaatacctggaagaactttcccggtcgaagttctg
tacactaaagaaccggagactgactacttggatgcatcgctaataacagtcatgcaaatt
catttgagagagccaccgggagatattctgttgttcttaacgggtcaagaggaaattgac
acagcttgtgagattttgtatgaacgtatgaagtcattaggacctgatgtaccagaactg
atcatcctaccagtttattcagcgctaccttcagaaatgcagacgaggatattcgaacca
gcacctccagggtctaggaaagtggtcatagctactaacatagctgaaacatcattgact
attgacggcatatactatgtggtggatccagggtttgtgaagcagaaggtgtacaattca
aagacgggaatggactctttggtggtcacacctatttcacaggcggcggcgaagcaacgc
gctggtcgcgccggacgtactggccctggcaagtgctaccgtctgtacacggagcgcgcc
taccgcgacgagatgctgcccacaccagtaccagagatacagcgcaccaacctcgctacc
actttggcgctggagcagctgcactcgctctccgcactcgactctgagggactactgacc
agacttggccggagaatggctgaattcccattagagccaaacctatcaaagatcctgatc
atgtcagtagcactgcagtgttcagatgaaatcttaacaatcgtctcaatgctgagtgtt
cagaacgtattctaccggcccaaagacaaacaggcgttggccgatcagaagaaggccaag
ttcaaccagccggagggtgatcatctgaccctcctcgcggtctacaacagctggaggaat
aacaagttctccaacgcctggtgctatgagaacttcgtgcagatacggacattgaaacga
gcacaggatgtaaggaaacagttgctgggcatcatggacagacacaagttagatgtggtt
tcagcagggaagaacacggtacgtattcagaagaccatttgctcaggtttcttccggaac
gccgctaagaaagacccacaggaaggctacaggactcttgttgacagtcaagttgtctac
atccacccttcaagtgcattgcctgtaaaataccgagagactagccactctacgcctgtg
ctcaagactgattaa
DBGET
integrated database retrieval system
