KEGG   Papilio machaon (common yellow swallowtail): 106719595
Entry
106719595         CDS       T05138                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106719595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pmac00536]
    106719595
Glycosaminoglycan binding proteins [BR:pmac00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106719595
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 106719595
NCBI-ProteinID: XP_014369443
LinkDB
Position
Unknown
AA seq 1773 aa
MALKMRGFILLLFFIFSTSKGDDDVEFFDVLSVVGDELPEGVTRVAGRCQSTATRPEEYS
AFRLNENATLHQLAAGMFYNTFPEDFSIIATVRLPGTDQNPLFVLYSDAGDEQLQLVVGE
LVELYYEDTRGDPPDHELLTYRVNIADGKWHRIGLSIKGDSATLLVDCEIRESLPLDRKP
GSTFNLAGALVVGTQVTPDQYYEGDIELLQFANKPDVAYDLCVAIAPDCDGYGSQYAGVA
STGNVNRFGNINTNGGYTYTPTPDLDLVRLPTDEYDGTIYEPVEENRSLDLRNGSNELWS
TATRDLSTSKPFWPIPDTYAQYPTSTDADENSIFGRFTDVDDFNSTPLNNIDFPTDVVAV
TTPRPIRQNNYNNFLTQNATLITTEASYSAMTTTEDSDWLTHPPEVYEGNSSIVYDPTDN
YYDYGGTGVYLGPRGYPGPPGPQGPRGPKGEPGRPGAEGQQGFTGPPGHVFVVPLHQSSN
DKGPDGQAEALRQMLTQHMTAMRGVDGPMGLTGPPGPEGDIGPEGPKGEQGEQGEPGPPG
VRGPQGPPGRIGRRGHAGRDGERGSPGAPGPKGEQGYPGLAGMPGDKGEHGNPGQQGETG
APGQDGPPGDDGPPGPPGLSGELGPRGFMGPRGFPGLIGYPGIPGNEGPQGAKGTSGQPG
PPGNPGQPGSIGPPGSTGPQGPIGAPGIQGPQGKPGISGLPGPEGSPGTPGSPGQQGSPG
ESGPQGLQGMLGFPGPRGPKGDDGPRGLQGDKGDKGIRGLEGEKGEIGPKGERGQPGEPG
DPGIEGPEGQKGTEGPRGETGSIGPVGEKGATGPQGLAGYPGTQGDKGDKGASGRRGRRG
AKGVVGMIGIPGDRGETGPRGYRGPRGRRGSDGPPGSKGDTGQPGSPGPAGERGPQGLEG
TRGFPGAMGPPGSDGKSGLPGPPGERGPVGDTGKPGLMGPPGAVGPQGPNGEMGPPGPQG
ASGIPGTPGDIGAPGEMGKEGPPGMPGPEGKPGPVGSPGPPGHQGDPGLPGAPGSLGAKG
DVGPPGPAGIRGDKGEQGEPGREGPQGPMGREGPRGSPGSGGQKGEIGEPGPIGPIGRDG
LPGPRGLTGAPGPVGPPGEDGDKGEAGPPGEKGFKGANGEPGPQGSPGIQGLRGETGPVG
LPGEKGQQGDPGSPGTNGADGARGPQGPPGLTGPQGEKGQSGIKGDKGDNGPIGPTGPAG
LTGPQGRRGAKGIQGEPGPQGAEGQRGEIGNSGAPGPPGPPGPEGKQGPRGAVGPKGEDG
PPGLQGEPGPKGPTGLEGPKGDAGPAGYPGEKGEPGPQGIKGEPGGEGPEGSTGPPGAPG
PTGPVGKPGDTGLPGSPGADGQAGVQGSPGIPGEKGDMGPKGAVGEPGPVGPPGPPGVEG
QRGIRGTPGANGEVGAPGIMGPAGPPGKPGPSGAPGIRGDKGNRGPKGHTGETGAMGVKG
DQGEQGVQGPPGPIGPPGPKGDLGPIGPPGAKGDIGPAGLPGREGPVGPKGQSGTDGRPG
LPGPAGPPGPPGPPAPAPHLPPELFTSFRRRRSIDIDSMESTTADELEEDEDIEWAHEIM
SGVVAARTALESVKRPWGTRSNPALSCKDLRSTHTNLTDGFYWIDARGGGGSGHPIRVYC
KGHYTCVYPDIMNTNEIYTTYDSAQKFSQIHNGHRISYENDGAGSIQLRFLKLLSHGARQ
NFTYSCLDAMAPQRSDIPPDLIRTNGIKLYGFNSAEFKEPQLIKDDCKEGKGEIVLEIKT
SRIERLPISDFQPLSYVEASHQFSFVVGPICFS
NT seq 5322 nt   +upstreamnt  +downstreamnt
atggctcttaagatgagaggattcatacttctattgtttttcatattcagcaccagtaaa
ggggacgatgacgtagaattcttcgacgtgctctccgtggtcggagatgagctgccagag
ggcgtaacgcgtgtggcaggacgttgtcagtcgaccgccaccaggcctgaagaatactca
gcgttccgactaaatgagaacgcgactttacaccaactggctgctggaatgttctacaac
acatttcctgaagacttctctattatagccactgtacgactgccaggcacggatcaaaat
ccactgttcgtgctgtactcggacgcgggagacgaacaactgcagcttgtggtgggcgaa
ctggtggagttgtactacgaggatactcgcggcgacccgcccgaccacgaactgctcacc
tatcgggtcaatatcgctgatggcaagtggcatcgaattggtctaagcataaaaggcgat
tcagcaactttgttagtggattgcgagataagagaatcacttccactggaccgaaagccg
ggcagcaccttcaatctagctggggcactcgttgttggcacacaggttacaccggaccaa
tattatgagggtgatatcgagctcttacaatttgcaaacaaaccggatgtagcttatgac
ctctgtgttgccatagcaccagattgtgatggctatggatcacagtatgccggagtagca
tctacaggcaatgtaaacagattcggcaacattaacactaatggaggttatacatacacc
ccaactcctgatttggacttagtacgactaccaactgatgagtacgatggaactatatac
gaaccagttgaagaaaatcgatcattagatctaaggaatggatcaaatgaattgtggtcg
acagcaacaagggatctttcaacttcaaaacctttttggccaatacccgatacttatgca
caatatccaacatcaacagatgctgacgaaaacagtatctttggaagatttactgatgtt
gatgattttaactctacaccattgaataatatagacttcccgaccgacgttgtagcagta
actacaccaagaccgatacgacagaataattataataatttcttaacacaaaatgctact
ctcattacaaccgaagcttcgtactctgcaatgacaactacagaagattcagactggctc
actcatccaccagaagtatacgaaggtaattcatcaattgtctacgatcccaccgacaat
tactacgactacggggggacaggtgtgtacctaggaccccgtggttatcctggccctcct
ggtcctcaaggaccgagaggtccaaagggtgaacctggcaggcctggagcggaaggtcag
caagggttcacgggaccaccgggacacgtttttgttgtaccactgcatcaatcaagtaat
gacaaaggcccagacggacaagcagaagcacttcgacaaatgcttacacaacacatgacc
gcaatgaggggcgttgacggtcctatgggactcactggaccgcccggacctgaaggggat
atcggcccagaaggaccaaagggtgaacaaggcgaacagggagaaccgggaccgcctggt
gtaagaggaccacaaggacctcccggtcgtatcggaaggcgaggtcatgctggaagagat
ggagaaagaggatcgcctggtgcacctgggcctaaaggtgaacaaggttatccggggctc
gcgggaatgccgggagacaaaggggaacacggcaacccgggacaacaaggtgaaaccggt
gcaccgggtcaagacggcccgccgggagatgacggcccaccgggcccacctggattatct
ggagaactgggacctcgaggttttatggggccgagaggttttcctggcttgatcggctac
cctggcattcctggtaatgaagggccgcaaggagcaaagggcacatccggacagccagga
ccccctggtaatccaggacaaccgggttcaataggaccaccagggtccaccggcccacag
ggacctattggtgcacctggaatacagggcccgcaagggaaaccgggaatatcagggctt
ccaggtcccgaaggatctcctggaacaccgggcagccctggacaacaaggatctccgggt
gaatcagggcctcaaggtttgcagggaatgctaggatttccaggacctcgaggtcctaag
ggtgatgacggaccccgaggattacagggagataaaggcgacaaaggaatacgaggtctt
gaaggtgaaaaaggagaaataggtccgaaaggcgaaaggggacaaccaggagaacctggt
gatcccggtatcgaaggaccggaagggcaaaaagggacggaaggacctagaggtgaaact
ggatcgattggaccagttggtgaaaagggagctacaggaccacaaggattagctgggtat
cctggaactcagggagataaaggagacaagggtgcatcgggtaggagaggcagaagggga
gcaaagggagttgtgggtatgatcggtattccaggcgacagaggagaaactggaccaaga
gggtacagaggaccaagaggacgtcggggatcagacggcccaccagggtctaagggtgat
acaggacagccagggtcaccaggacctgcaggcgaaagaggtccacaaggtcttgaaggt
actcgtggcttcccaggcgctatgggacctccaggttcggatggaaaatctggattgccg
ggacccccaggcgaacgtggcccagtgggtgacactggtaaaccaggtttgatgggccct
cccggagctgtaggacctcaaggaccaaatggggaaatgggaccaccaggtcctcaagga
gcgtctggcataccggggacaccgggtgatatcggtgcacctggtgaaatggggaaagaa
ggtccacccggaatgccgggtcctgaaggaaagcccggtccagttggttcaccaggtcca
cctggacatcaaggagatcctggattgcctggggcaccgggatcactaggtgcaaaagga
gatgtgggtccaccgggacctgctggtattaggggtgacaagggagagcaaggcgaaccc
ggccgcgaaggtccgcaaggccctatgggacgagaaggtccccgaggttctcctggatcg
ggtggacaaaaaggagaaattggtgaaccaggaccgattggtcccattggacgtgatgga
ttacctggcccaagaggcctgacgggcgcgcctggccctgtgggtccgcctggagaggat
ggggacaagggtgaggccggtccacctggcgaaaaaggttttaagggcgctaacggagaa
ccgggacctcaaggatcacctggcattcaaggcttacgaggggagacgggtcctgtggga
ttacccggagaaaagggccaacaaggcgatccgggttcacccggaactaatggtgcggat
ggagctagaggccctcaaggtccccctggtctaacaggacctcaaggtgaaaagggacaa
tcaggaattaaaggagacaagggagacaacgggcctatcggacccactggtccagcgggg
cttaccggccctcagggacgacgaggcgcgaaaggaattcaaggagagcccggacctcaa
ggagcggaaggtcaacgaggtgaaattggtaactctggtgcccctggtccaccaggacct
ccaggccctgaaggaaaacagggaccaagaggtgctgttggaccaaagggcgaagatggg
cctccaggattacagggtgaaccaggaccaaaggggccaaccgggttagaaggacctaaa
ggggacgctggcccagcaggataccctggtgaaaaaggagagccagggccgcagggaatc
aaaggagagccgggtggagaaggtccggaaggtagcacaggtccacccggtgccccggga
ccaactggtccagttgggaagcctggagatacaggattacctggcagcccaggagctgac
ggacaggcaggtgtacaagggagtccagggattccgggagagaagggcgacatgggtccg
aagggagcagtaggtgaaccggggcctgttggaccaccagggccgccgggagtcgaaggt
caacgaggtatcagaggaacgcccggtgcaaatggtgaagtaggcgcacccggtataatg
gggccagcagggcctccgggaaaacctggtccatcaggtgcgcctggtattaggggcgac
aaaggaaacaggggcccaaaaggccacactggtgaaactggagcgatgggtgtgaaaggg
gatcagggcgaacaaggcgttcagggacctccgggtcctatcggtccaccaggacctaaa
ggagatttagggccaataggtccgccgggagctaagggtgacatcggacctgcgggctta
ccgggcagggaaggtcctgtaggtccaaagggtcaaagcggcacggatggtaggccgggt
cttccagggccggcgggtcctccggggccaccgggaccacctgcacccgcaccacatcta
ccaccagaactgttcacgtcgttccgccgacgcagaagtatcgacatcgattcaatggaa
tccacgactgctgacgaactcgaagaagatgaagatatagaatgggcgcatgaaattatg
agtggtgttgttgcggcgcgaactgctttggaatcggttaagcggccgtggggaacacga
tctaatccagcactgtcatgcaaagatctacgcagcacacatactaatttaactgatggt
ttttactggattgatgcaagaggcggcggcggcagcggccatccgatacgagtatattgc
aagggccactacacttgcgtatatcctgatatcatgaatacaaacgaaatttatacgact
tatgattcagctcagaaattctcacaaattcataatggacatcgtatttcatatgaaaac
gatggagcgggatctattcaacttcgtttcttaaaattgttatctcacggtgcgcgccaa
aactttacatattcatgtctggatgcaatggctccacaaaggtctgacatcccaccagac
ttgattcggacaaatggtattaagttgtatggattcaattcggcagaattcaaagaaccg
cagctaataaaagatgattgtaaagaaggtaaaggggagattgtgctagaaatcaagaca
tctcgtatcgaacgtttacccatcagcgacttccagccgctgtcatatgtcgaagcttca
catcagttttcatttgttgttgggccgatttgcttctcgtag

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