Papilio machaon (common yellow swallowtail): 106719611
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Entry
106719611 CDS
T05138
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106719611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106719611
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106719611
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106719611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
106719611
NCBI-ProteinID:
XP_014369471
UniProt:
A0A194QMF0
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MTSHVSIRLASERVNHCVATSNELPRFYTPGEIISGMQDFMRGHGTYTEDDNLKSSVAGV
MQKVNKLICIRPLKSRYVGEIGDVVVGRVLEVQQRRWKVDTNSRLDSILQLSSVNLPGGE
LRRRSVEDEQSMRKVLQEGDLISAEVQSVFSDGSLSLHTRSLKYGKLVQGTLVKVFPSLI
KRRKNHFHNILGISIIIGNNGYIWISPREKETTEDDDFENVEKAKLEPVSISVREIMARV
KNCIAALVASKMMLDDTSILMAYEESLKYENAKELLDPEAMLDIAFLTQHRLNNIMTE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccacgtttctataagattagcatcagaacgagtaaaccattgtgttgctact
agtaatgaattgcctcgcttttacacgccgggggaaattatatctggtatgcaggacttt
atgcggggacatggaacttatacagaagatgacaacttaaagtcgtcagtggctggggtt
atgcaaaaagttaacaaattgatatgcattagaccattaaaaagtcgatatgtgggggaa
attggtgatgttgttgttggtcgcgtcttggaagtgcagcagcgacgctggaaagtggat
actaattcacgtttagactcaattcttcagttatcttcggtcaatcttcctggaggggaa
ttgcgtcgcaggtctgttgaagacgaacagtccatgagaaaggtattgcaggaaggtgac
cttattagtgctgaagtacagagtgtgttttctgatggctcactctctctgcacactaga
agtctaaagtatggcaagttagttcaaggtacactagtaaaagtatttccatctttgatt
aaacggaggaagaatcactttcacaatattcttggtatttcaataattattggtaacaac
ggctacatatggatatctccacgtgagaaagaaaccacagaagatgatgattttgaaaat
gttgagaaagctaaactagagcctgtaagtatctctgtcagggagattatggcaagagtg
aagaactgtattgccgcattggtggcatcaaagatgatgttggatgacacaagtattcta
atggcatatgaagaaagtcttaagtatgagaatgcaaaggaactgttagatccagaagca
atgctcgatattgcctttttaacacagcatagattgaataatataatgactgaataa
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integrated database retrieval system
