Papilio machaon (common yellow swallowtail): 106719785
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Entry
106719785 CDS
T05138
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106719785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106719785
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106719785
Spliceosome [BR:
pmac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106719785
Complex C
U4/U6.U5 tri-SnRNP related factors
106719785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
T2SSE
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
106719785
NCBI-ProteinID:
XP_014369714
UniProt:
A0A194QNE5
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MDKRGKRQHSSSDSDSAEEQRKKDIKERDEFAKRLKKRDEEKVKKVTESTSKRSYEEAAK
RLKLEAEDRNKILPKLRVQSRRKYLEKRKEDKVLELEADIADDEYLFDESVLTEKEKKER
EHKKTILQLAKEHEKARELENVQRYHMPRDLGKGEKGEYIEVDENEKLPHSEQRKWEQEQ
IKSAFFKFGAKDAKAQDEYELLLDEQIDFIQALQLEGNKEKKEDEEKSEYQKIRMTIEET
KKSLPVFPFRDSLIEAIRNYQILIVEGETGSGKTTQIPQYLHEAGFTKDGKKIGCTQPRR
VAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASYS
VMIIDEAHERTLHTDILFGLVKDITRFRPDLKLLISSATLDAEKFSNFFDEAPIFRIPGR
RFPVDIYYTKAPEADYVDASVVSILQIHATQPLGDILVFLTGQEEIETCVEMLQDRTKRL
GKKIKELLILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGFA
KQNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTVPEI
QRINLGNAVLTLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRRM
AEFPTDPMLAKMLLASEKYKCSEEIVSIAAMLSVNSSVFYRPKDKIIHADTARKNFFHRN
GDHLTLMNVYNQWVGSDYSVQWCYENFIQYRSMKRARDVREQLVGLMERVEIDMVSSISD
DTNIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMIHPNSALFEELPRWVIYHELVFTSK
EFMRQVTEIESKWLLEVAPHYYKSNELEDSTNKKMPKTLGKSASK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgtggaaagcgacagcactcatcatcggattctgatagcgcagaagaacag
cggaaaaaggatataaaggaacgagatgagtttgcaaagagattaaagaaacgcgatgaa
gaaaaggtaaaaaaagtaacagagtccacgagtaaacgttcttatgaagaagcggccaaa
cgcttgaaattagaagcggaagacaggaacaaaatactaccaaaactcagagttcaatct
cgccggaaatatttagagaaaagaaaagaagataaagttttagagttggaagcagatata
gctgatgatgaatatctgtttgatgaaagtgtgttaacagagaaggagaagaaagaaaga
gaacataagaaaaccatattacaattagccaaggagcatgaaaaagcaagagagttggaa
aatgtacaaagatatcatatgcctcgggatttgggtaaaggtgaaaaaggtgaatatatt
gaagttgatgaaaatgaaaaactaccacattcagaacaacgcaagtgggaacaagaacaa
ataaaatcagcattctttaaatttggggcaaaagatgcaaaagcacaagatgaatatgaa
ctcttgcttgatgaacaaattgattttattcaagcactccaattggaaggtaacaaggag
aagaaggaagatgaagagaaatctgaatatcaaaagatacgcatgacaattgaagaaact
aagaaatctcttccggtttttcctttcagagactctttgattgaagctattagaaattat
caaatactaattgtagaaggtgagacaggatcaggtaaaacaactcagattccacaatac
ttacatgaagcaggatttacaaaagatgggaaaaaaattggatgtacacaaccaagaaga
gttgctgcaatgtcagtagcagcaagagttgctcaagaaatgaatgtcaagcttggaaat
gaagttggatacagcattcggtttgaagattgtacatcagatagaactgttattaaatat
atgacagatggaacactacatagagagtttctatcagagccagacttagcatcttacagt
gttatgataatcgatgaagctcatgaacgcactttgcatactgacattttatttggtttg
gtaaaagacatcactagatttagacctgatttaaaattactcatatctagtgccacatta
gatgctgaaaaattttcaaacttttttgatgaggcaccaatttttcgtatccctggtaga
aggtttccagttgatatttattacactaaagctccagaagctgattatgtagatgccagt
gtagtgtctattctgcaaatacatgccactcagccattaggagatatactggtctttctt
acaggtcaagaagaaattgagacatgtgtagaaatgttacaggacagaaccaaaagatta
ggaaagaagattaaggaactgttaatattaccagtatatgcaaacctaccaagtgacatg
caagcaaaaatctttgaaccaaccccagagggagcccgaaaagttgtgttagcaacaaat
atagctgaaacttcacttacaattgacaacatcatatatgtaattgatccaggatttgca
aaacaaaacaactttaattccaaaactggaatggagagtttaatggtagttccaatatct
aaagcatcggctaatcaaagagctggcagagccggaagagtggccccaggtaaatgcttc
agactttatactgcatgggcatataagtatgaacttgaagataataccgtcccagaaatc
cagaggattaatttagggaatgctgttctcactttgaaagcattaggaatcaatgacctt
attcattttgatttcttggatcctcctccccatgagacattagttctagctttggaacaa
ttgtatgcacttggagcacttaatcaccatggagaattaactaaggctggccgaagaatg
gctgagtttcccactgatcctatgttggctaaaatgctattagccagtgaaaaatataaa
tgctcagaagagattgttagcattgctgctatgttatcagttaacagctcagttttttat
cgacctaaggataaaattattcatgcagatacagctagaaaaaacttttttcatagaaat
ggggatcatttgactctaatgaatgtgtataatcaatgggtgggctctgattattcagtg
caatggtgttatgaaaacttcatacaatatagatctatgaaaagagctcgagatgttcga
gaacaacttgtgggattgatggaaagagttgaaattgatatggtttcaagtatatcagat
gacactaacatcagaaaggcaattacggctgggtatttttatcatattgcaaaattttcg
aaaggtggacattacaaaactgttaaacataatcaaactgtgatgattcatccaaacagt
gctttatttgaagaattaccaagatgggttatttatcatgaactagtttttacatcaaaa
gaatttatgagacaagtaactgaaatagaaagtaaatggctactggaagtagcaccacat
tattataaatcaaatgagttggaggattcaacaaataaaaaaatgccaaaaactttagga
aaatctgcaagtaaataa
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