Papilio machaon (common yellow swallowtail): 106720107
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Entry
106720107 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmac04131
]
106720107
Membrane trafficking [BR:
pmac04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106720107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
106720107
NCBI-ProteinID:
XP_014370174
LinkDB
All DBs
Position
Unknown
AA seq
3223 aa
AA seq
DB search
MVFESIVVDVLNRFLGDYVENLNRSQLKLGIWGGDVVLENLILKQNALEELNIPVQTVYG
HLGKLVLKIPWKNLYGASVEATIERLFLIVNPSAEVKYDPEKEEKMALASKQAELARVEE
AKKKEAQKDQNKLDETFVEKLVTQIIKNVQLKITDIHIRYEDSITNPKAPFSFGITLHNL
SVHTTDENWKQAVIQEAVTKIFKILDLEGLAIYWNPATELYSKSEAQDIKTRFQNEIATK
SSQPSSYKYALGPINATAKLQLNPKPEGDTPKFSIPKVILSLHMEQLSVSLTKTQYQDMM
LLADSMDRMSKGAPYRKYRPDVKTYKNHYKQWWHFAYTCILEEEVRRRRRNWNWTHMLSH
RQLCKDYASAYQCKLNNKGKVTTDQNNIICQAEKSLDLLNLVVIRQRIEMEVSEICKMEE
EARKSRGWFGGWWSRGSSKDEELTEGTAIMKQFEKAMTVEEKEKLFRAIDYQENSAPLHL
PAEYVAVEGHFRLDRLQLAVTDQSEVLRARVDTVQLDMHQRPSANALRVDVQMKSFTVSG
VQQGEIVPQMVTSKEVTQDANLLNVVFETNPLDGKCDQRVQVLARPLQIVYDAQTVIEIV
NVFKPPTESTALTTLQAAAGNKLSDLKEKSTLGMQYAVHNHTFIDLDIDIAASYIIVPQT
GIYRGNEACVVVKLGAISVKSAPRPEPLDVHKLHREGLAEEDILREITARSYDKMTLQLT
KMQIVIASAQEEWQTAIGSEVGTPLHLLQPTNLTIQIHKCLITDDPRMPKIKVRGELEKI
AISVSEDRLLTLCEILVSMPLPQSEETTQLKASDSKASSLSLLRYLDPAEKQRRDTARSK
QRKTDEQSVQLTEVEAFFIMKELILSVNRKISAESQGYDKFLVFSLQLLELTATQKTFTL
EATVRLGAVNMQHHRTGHRIISMIETPEVPAIDVTDTAVTTSQYLFAVTYRNVDKKCSEF
RSHYGSIEQLIELDFTTLKVLLHLQGLQEILIIVNEYQTRLQNIQSKVDRYANAGPLETI
MEDEEFSVAKSKASVSKPARRKQIESIQLKVNVKIGAVEIGFATDRRPLAALSLQGAGAG
RVLKPSYTQLDCAIASIKVEDLNPATIHREILKVLGGDVINVQIVMYNLEQYPSVSDVNM
SIDAQINCLRIVFLNWFVTSMLEFLNNFQTAQQAIIEASSQAADAARANVQNAYQNLTKL
SLKVRLAAPLILVPENSSSRHAVLVDLGRMTLNNQFVDLPVADVSNKVTVEELMLELEDM
KLSCVELRADQLDVLHERKLLRPTSFKLFVKRSLSQWYDTLPDLDISGRMNTIAITVGHS
DXKSIMKILNQNLQEGQTKTEDTKAAQTMPKATSKAGVKTQVSKAQVKSVSTPVTPTEDK
KPRTTIKFAFTMDSFVIDLLNTTASVDNPSKGLDVDLARFCLALLSVKGRMFSDGSLHTS
VLLVDCTLDDTRPGRGAKITRYLERRRDNQETLLERTHESTTIMEANDKIRSMIDITYTM
KNSDTFIDMRIFSFNLILAMDFLNKIAEFMTTGLAEDTPDAADIKLRPNADKSIDNATRR
KTMTSSAVVEPAQKPSMMTVNIKIEQPDIILVESLEQKQCDALVLNMEGRFKLRRTEERM
VAEGGVTGLQLVLRQLGRSGAPRTLLAPAHVSLALSQPPGSGPHVDLAVSDIKLTVSPEE
AEEAINLESPSGVEQERPPAGEICLLSSPSIVVSLEMDIGNETIPVLVMQASLTAQLRDW
SSDPYMESTWAMQVSYYNIGRAVWEPLIEPVEVLKDSQYKHVPWELKMEVVMKPQEAHTV
IDTTDEAANLQVVAQRQANKTITISSSEPLEITITRTGMEVLTQLGNSFAAAVATEADTT
IVTKAKVDDITKKEYLGAPYVLHNCIGLTAKLLLQNNKDFSVFLIDEHKSSDYREVVLEP
GACVPLQLKHGGLNLMKLNEPPPPLKLNVKIVELDEEIIIPVERADKRYFTLGRRHSGSK
GGTGTTGTLEKHVPHAAAVEPRGLISDIVMQDAALHIYLRSIVQVINSLSVNVSVYYMTL
SGNEVRLLGEVKPAGVLRLPLQAVHTPTAELFFSVEGFTVSVSPFIWRELQNEVTITKLL
QCDSKDKTSGEKFYLKAVGSMEQVFFEHSNRHTFASSCYEVVLKPAVKLQNCLPVDIIVS
QLGLKRTQVFKPGEMFHLSHLAPNRASIVVMIQSYLDKCWVCTKNLPDEETELSVWSFES
HDSPTVMTLDLGVHSSDTEGTQVLSLYCPFWMLNKTGFTLCYRKSKKPEKDSSSPNKNAD
EMGNVIFHPKDYKEPILFSFRAKNFFGKKKAAIRVEFGEWSDKFSLDVPGSSGVVICRNE
GRTYQVAVTNQLTFNSLTKMVIFTPFFLIINEAPFAIQYQELHRSGDPWREVEQKSSSAL
WPVVEREDKLLLLRVAGSVEHAAPFLYTEQHTVCLKLNNEYGGLHVEVQLSEGGTYITVR
QYRDGHAPALLVNFSSHPIVVYERENVNVKKIPPMHRMLFTWDNPAGPRMLIFEGHKKTE
IFNDLRKDGIGEFMISETERMSWVSFLDGLQRVVLLTGDALLAAGAHTLGEAEPLHTEVV
LAMHGLGLSLVNDTEALEIVYVSISNSGIIWEQCKLGARRYKKIEGPKLLQLEEAYQRYI
TEKMVSDEPVPCRILIDEKMEVDFEEMRILKPSQRLVRRTQEPGLWASLGVTAHSRRLHA
RLYRLQVDQQLPLPTFPVLLAPVPPPKSVVNDDPNGMKPFIEVSIVERIMEHSNVRQYKY
YKVLIQEFHVKVDMGLINALMGMFPQRLLTEQEALDAFQLDMERAGQPLEALAALSAASD
LKNFYDNLHLSPLKVHVSFSLGGATQLPTFVGTLLQSIGVTLTDMNDVVFKLSYYERNYE
FLSQKELISQVQSHYTGQALKQLYVLVLGLDVIGNPYGLVIGLKKGVEDLFYEPFQGAIQ
GPGEFAEGLMLGVRSLVGHTVGGAAGAVSRITGAMGHGLAALSLDKDYQRRRRDNINKPP
ANLQEGLARSGKGLVMGVVDGVTGVFTKPFEGARDHGVEGFFRGLGVGAVGLVARPTAGV
VDFASGSLDAVKRAADLSEEVTKRRAARYLPPDAGVRPYSRLQAEGYKMLSELEKGKFVS
TDTYEAHVWVIAGKEAVMCTDKRLLYLERNNVFGGWQIVWTYLWTEIPKVPTAVSKGVYI
PTAKKKVLGMFSSSGSGKVIFLYDEQQKRYLLAQCERLMRAPR
NT seq
9672 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaatcgatagttgtcgatgtccttaatagatttctaggggattatgtcgag
aatttgaacaggtctcagttaaagttaggaatatggggcggcgacgtagtgctagaaaac
ttaatattaaagcaaaatgccttagaagaactcaacatccctgtccagacagtttatgga
cacctaggaaagctagtccttaaaataccatggaagaatctttatggtgcttcagtagaa
gcaacaatcgaacgacttttcttgattgtaaatccttctgctgaagtcaaatatgacccg
gagaaggaagagaagatggcgctagcgtcgaagcaagcggagttggcgagagttgaagaa
gccaaaaagaaagaagcacaaaaagatcaaaacaaattggatgagaccttcgtagagaag
ttagtgacacagataattaagaatgtgcagttgaaaatcactgatatccatataagatat
gaggatagtataacgaatcctaaagcgcccttctccttcggaatcacgttacacaacttg
tctgtacataccaccgacgagaattggaagcaagcagttattcaagaagctgtcaccaaa
atatttaagatattggatttggaaggattagccatttattggaatccagccacagagctg
tattctaagtccgaggctcaggacatcaagacaaggtttcagaatgagatcgccacaaaa
tcatcgcaaccgtcatcttataaatacgcattgggtccaattaatgccactgccaagtta
caactgaatcccaagccggagggcgatacaccgaagttcagtatacctaaagtgatcctc
agcctgcacatggagcagctgtcagtgagcctcactaagactcagtaccaggacatgatg
ctgcttgctgactccatggacagaatgagtaaaggagcgccctacaggaaataccgtccg
gacgtaaagacatacaagaatcattacaagcaatggtggcatttcgcctacacttgtata
ttagaagaagaggtcagacgacgtcgtaggaattggaattggacgcacatgctgagccat
cgccagctgtgtaaggactacgccagcgcgtaccagtgcaagctcaacaataaggggaaa
gtcaccaccgatcagaataatatcatctgccaagctgagaagtcattagatcttcttaat
ttagtagtcatcagacagaggatagaaatggaagtaagtgaaatttgtaaaatggaagaa
gaagctcgtaagtctcgcggctggttcggcggctggtggtctagaggtagttccaaggat
gaagaacttacggaaggcactgctataatgaaacagttcgagaaggcgatgacggtggag
gagaaggagaagctgttccgtgcgatcgactaccaggagaacagcgcgccgctgcacctg
cccgcggagtacgtggcggtggagggtcacttccggctggacaggctgcagctcgccgtc
actgaccagagcgaggtgctgcgcgcgcgcgtcgatacagtgcagctcgacatgcaccag
cgacccagcgccaacgcgctcagagtggatgttcaaatgaaatcgttcacggtgtctggt
gtgcagcaaggcgagattgtacctcagatggtcacgtcaaaagaagttacacaagacgcc
aacttgttgaatgttgtgttcgaaacaaatccattagacggaaagtgcgaccagcgggtg
caagtgctggcgcggccactacagattgtgtacgacgcgcagactgtcatcgaaatcgtc
aacgttttcaaaccacccacagaatccaccgctttgaccactttacaagctgcagcgggt
aataaattatctgatctaaaggaaaaatctacactgggaatgcaatatgcagtgcataat
catacattcatcgatttggatatagacatcgccgcttcatacattattgtgccacagact
ggtatatacagaggtaatgaagcgtgtgtggtggtgaagctgggtgcgatcagtgtgaag
tcagcgccacgaccggagccgctcgatgtgcacaagttgcaccgcgaggggctcgcagaa
gaggacatcctgcgcgagatcacagcccgcagttacgacaagatgacgctgcagcttacc
aaaatgcagattgtgatagcgtctgctcaagaggagtggcagacggcgataggatctgaa
gtgggcacgccgctgcacctgctgcagcccaccaaccttaccatacagatacataagtgc
ctcatcactgacgaccctcgcatgcccaagattaaagtccgcggcgaactggagaagatc
gccatctcggtctcagaggataggttgctaacattatgcgaaatattagtgagcatgcct
ttaccccaatctgaagagacgacacaactaaaggctagtgattcgaaggcgtcgagtcta
tctttgctcaggtacttggatcctgcagagaaacagagaagagacacagcgcgctccaag
caaaggaaaactgacgaacaatccgttcagctgactgaagtggaggcattctttattatg
aaagaactaatccttagtgtgaatcgaaagatatcagcagaatcgcaaggttacgacaaa
ttcttagtgttctcactgcaactgctagaactaacggcaacacagaagacgttcacatta
gaggcgactgtgagactgggtgcggtcaacatgcaacatcacagaactggacatcgtatt
atcagtatgatagaaacaccagaagtaccggctattgatgttacggatacagctgtgaca
accagtcagtacttattcgcagtcacatatcgtaatgttgacaagaaatgttcagaattc
agaagtcattacggatctatcgagcaacttattgaattggatttcaccactctcaaagtc
ttgttacatttacaagggctgcaagagatactcatcattgtcaatgaatatcagacacgt
ttacaaaacatccaaagcaaagtcgacagatacgctaatgcaggtccattggaaactatt
atggaagacgaagaattttctgttgccaaatcaaaagcgagtgtatcaaagcctgcgcgt
cgtaagcagatcgagagcattcagctgaaggtgaacgtgaagattggtgcggtggagatt
gggttcgcgacagaccgccggccgctcgccgcgctcagtctgcagggcgccggcgccggc
cgcgtgctcaagccctcctacacgcagctggactgtgccatcgcatccatcaaggtcgag
gatctcaaccccgcgactatacatagagagattctgaaagtgctcggtggtgacgttatc
aatgtacaaatagtgatgtacaatctggaacaatatccgagcgttagtgatgttaatatg
tcgatagacgcgcagatcaactgcttgcgtatcgttttcctcaactggttcgtcacttcg
atgctggagttcctgaacaacttccaaacggcacaacaagcgatcatcgaggcgtcatcg
caggcggcggacgcagcgcgcgccaacgtacagaatgcgtaccagaacctaacaaagttg
tcgctgaaggtgcgcctcgctgcgcccctcatcctcgtaccggagaactcctccagccgg
cacgccgtgcttgtggacctcggccgcatgacgctcaacaaccagtttgttgatctgccc
gtcgctgacgtaagtaataaagtgacggtggaggagctgatgctggagctagaggatatg
aagctgtcgtgtgtggagctgcgcgcggatcagctggacgtgttgcacgagcgtaagctg
ctgcgtcctaccagcttcaagctgtttgtgaagcgcagcctgtcacagtggtatgacacg
ctgcccgacctcgacatctccggcaggatgaacaccattgcgattactgtagggcatagc
gattaaaagagtattatgaagatcctaaatcaaaatcttcaagagggacagacgaagact
gaagacacgaaagcagctcagaccatgcccaaggccacgtccaaagccggagtcaagaca
caagtcagcaaagcgcaggtcaaatctgtgtcaactcctgtaacacctactgaggacaag
aaacccagaacaactattaaatttgcattcactatggatagctttgttattgatcttttg
aatactactgcctctgttgataatccatcaaagggtttagacgtggatctagctcggttc
tgtctcgcgctgctgtcggttaaggggcggatgttctcagacggctctctgcacacctcg
gtgctgctggtagactgcaccctcgacgatacgcgccccgggagaggggctaagattaca
cgatatctggaaagacgtcgtgataatcaagaaacattgttggaacgaacgcatgaatcg
acaactattatggaggcaaacgacaaaatacgcagcatgatcgatatcacatacacaatg
aagaactcggacacatttatcgacatgagaatattcagtttcaacctgatcctggcgatg
gacttcctgaacaagatcgcggagttcatgacgacgggcctggctgaggacacgcccgac
gccgcagacattaaactcagacccaacgcagacaagtccatagacaatgccaccagacgt
aagacgatgacgagcagtgcggtggtggagcccgctcagaagccgtccatgatgaccgtc
aacataaagatcgagcagccagacatcatactggtggagtcgctcgagcagaagcagtgt
gacgctctggtgcttaatatggagggtcgcttcaagttgcggcgcacagaggagcgcatg
gtggcggagggcggggtgacagggctgcagctggtgctgcgccagctgggcaggtcgggc
gctccccgcaccttgctcgcgcccgcccacgtctcgctcgcgctctcgcagccacctggc
agtggaccacacgtcgatctcgccgtctcagatataaagcttacagtgtcgcccgaagag
gcagaggaagcgataaacttggagtcgccctcgggtgtggagcaagagcggccgccggcg
ggagagatctgcctgctgtccagcccctccatagtcgtctcattggagatggacatcggc
aacgaaaccataccagtcctcgtcatgcaggcctcgctcaccgcacagctcagagactgg
agctccgacccgtacatggagtcgacgtgggccatgcaggtgtcgtactacaacattggt
cgtgccgtgtgggagccgctcattgagcccgtcgaggtactcaaggactcgcagtacaaa
catgtgccctgggaactcaagatggaggttgtaatgaagccacaagaagctcacacagta
atcgacactacggacgaggcggccaacctgcaggtggtggcgcagcggcaggccaacaag
acaatcaccatctccagcagcgagcccctcgagatcaccatcaccaggaccggcatggaa
gtgctgacacaactaggaaactctttcgccgccgcggtggccacagaagctgacactacc
attgtgactaaggctaaggttgatgatatcactaaaaaggaatatttgggcgctccgtat
gttctgcacaactgtattggcctgacagcgaagcttttactacagaataacaaagatttc
tcagttttcctcatagatgaacacaagtctagtgattacagggaagttgtcctagagccg
ggcgcatgcgttcctttgcaattgaaacatggcggtctcaatttgatgaaacttaatgaa
ccacctccacctcttaaattaaacgttaagatagtcgagctagacgaagaaataataatc
ccggtggagcgcgctgacaagcggtactttactttggggcgacgacattcagggtcaaaa
ggagggacgggaactacaggcacgctggagaaacatgtccctcatgcagccgccgtggag
ccgcgcggtctcatctcagatatcgtgatgcaggacgccgctctgcatatatacctgcgt
agcatcgtgcaggtaataaatagtttgtcggtgaatgtgtcggtgtactacatgacactg
agcggtaacgaggtgcggctgctgggcgaggtgaagccggccggtgtactgaggttgccg
ctgcaagctgtgcacacacccaccgctgaactcttcttctccgttgaaggtttcacagtg
tcggtatcgccattcatttggcgcgaattgcagaatgaagtgacgataacaaagctgttg
cagtgtgactcgaaggataagactagtggtgaaaagttctatcttaaagcggtgggcagt
atggagcaagtattcttcgagcactcaaaccggcatacgttcgcgtcctcgtgctacgag
gtggtgctgaagccggcggtcaagctgcagaactgcctgcccgtcgacatcatagtctca
cagctcggcctcaagcgaacgcaagtcttcaagcccggagagatgttccatctgtcgcat
ctggcaccaaatagagcctccattgttgttatgatacaaagctacctagataaatgctgg
gtgtgcaccaagaatctgcctgatgaggagacggaactgtccgtctggtcgttcgaatct
cacgacagccctactgtgatgactctggacctgggagtccacagcagcgacactgagggc
actcaggtcctctccctctactgccccttctggatgctcaacaagaccggcttcacgctc
tgctacaggaaatcaaagaaaccagaaaaagactccagctcacccaacaagaatgctgat
gaaatgggtaatgtaatcttccacccgaaagattacaaggagccgatactattttcgttc
cgtgctaaaaacttctttggcaagaagaaagcagccattagagtggagtttggggagtgg
tcggacaagttctccttggatgtgcccggcagctccggtgttgttatatgcaggaacgag
ggaagaacttaccaggtggcagttacgaatcagttgacgttcaacagtctaacgaaaatg
gtgatattcacgcctttcttcctgatcataaacgaggcgccattcgctattcaatatcag
gagctgcatcgttccggcgatccctggagagaggtggaacaaaagtcaagttcagcgctg
tggccggtggtggagcgcgaggacaagctgctgttgttgcgtgtagcgggctccgtcgag
cacgccgcgcccttcctctacacggagcagcacactgtctgcctcaagcttaacaacgag
tatggcggactacacgtggaggtgcagctgagcgagggcggtacgtacataacggtgcgt
cagtaccgcgacggccacgccccagcactcctcgtcaacttctcctcccaccccatcgtt
gtctacgagcgcgagaacgtcaacgtcaaaaaaataccaccgatgcatcgtatgctgttc
acgtgggataatccagccgggccacgcatgctgatatttgaaggccacaagaagactgaa
atattcaacgatctcagaaaggacggtattggagaatttatgataagtgagacggagcgg
atgtcatgggtgtcgttcctggacgggctgcagcgcgtggtgctgttgacgggagatgca
ctgctggctgcgggcgcgcacacgctgggggaggcggagccgctgcacaccgaggtcgtg
ctcgccatgcacggcctcggactgtctctcgtcaacgacacagaggcattagagatcgta
tacgtcagcatatccaattctggaataatatgggagcagtgcaagttgggagctcgtcgc
tacaagaagatcgaaggtccaaaactgctccaactggaagaagcctaccaacgttacatc
actgagaagatggtcagcgacgaaccggtgccatgtagaatattaatcgatgaaaaaatg
gaggtggatttcgaagagatgcgtatactgaagccgtctcagcggctggtgcgacgcacg
caggagcccgggctgtgggcgagtttgggtgtgacggcgcactcgcggcggctgcacgcg
cgcctctaccgcctgcaagtggaccagcaactgccgctgcccaccttccctgtgctgctc
gcgcctgtacctccgcctaagtccgtcgtcaacgacgaccccaatggtatgaagccgttt
attgaggtgtcgatcgtggagcgcataatggagcacagcaatgtgcgccagtacaagtac
tacaaggtgctcatccaggagttccacgtgaaggtcgacatgggtctcatcaacgccctc
atgggcatgttcccgcagcgcctgctcacagaacaggaggcgctggacgcgttccagttg
gacatggagcgcgcggggcagccgctggaggcgctggccgcgctcagcgccgcttcagac
ctcaagaacttctacgacaatctgcacttgtcaccgcttaaggtccacgtatcattttcc
ttgggtggtgcaacacaacttcccacctttgtaggaacgttgctacaaagtataggcgtc
accttgactgatatgaacgatgtcgtcttcaagttatcatactacgagaggaactacgag
ttcctgtcgcagaaggaactgatcagtcaagtgcagagtcactacacgggtcaggccctg
aagcagctgtacgtcctagtactaggtctagacgttattggcaatccctacggtctcgtt
attggactcaagaaaggtgtcgaggatctcttctatgaaccgttccaaggtgcgatccaa
ggtccgggtgagtttgcggagggtctgatgctgggcgtgaggtcgctggtggggcacact
gtgggcggtgcggcgggcgcggtgtctcgtatcaccggcgctatgggacacggcctggcc
gcactctcgctggataaggattaccaacgtcgccggcgtgataacatcaacaaacctcca
gctaacttgcaggagggtttggccaggagcggaaaaggacttgttatgggcgtagtggac
ggtgtgacgggtgtgttcacgaagccgttcgaaggtgctcgtgaccacggcgtggagggc
ttcttcaggggtctgggtgtgggcgccgtgggtctggtggcgcgacccaccgctggggtc
gtggacttcgcgtccggttcactggacgccgtcaagagggcggcggatctatcggaggag
gtgacgaagcggcgcgcggcgcgctacttgccgcccgacgccggagtgcgaccttactcc
cgtctgcaggctgagggttacaagatgctctcagaactggagaagggcaaattcgtaagc
acggacacttacgaggcgcacgtgtgggtgatagcgggcaaggaggcggtcatgtgcacc
gacaagcgcctgctctacctcgagcgtaataacgtcttcggcggctggcagatcgtatgg
acttacctgtggacggagatccctaaagtccccacagcggtcagcaaaggagtctacata
ccgactgcaaagaagaaagtattgggaatgttctcaagctccggttcaggcaaagtgata
ttcttgtacgacgagcaacagaagcgctacctgctggcgcagtgcgagcggttgatgcgc
gcaccacgttga
DBGET
integrated database retrieval system
