Papilio machaon (common yellow swallowtail): 106720622
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Entry
106720622 CDS
T05138
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106720622
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
106720622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
106720622
NCBI-ProteinID:
XP_014370826
LinkDB
All DBs
Position
Unknown
AA seq
1759 aa
AA seq
DB search
MTHQNHQTNGASLEDCHTNFFALTELYGIKWRKLVWQRECGGGGGKGEEGAAPLGDPVIS
SYARCLAGDILCVWRRVPSQQSPDLYDMPAPPPLSLRAAKELWIFWYGEEPDLSGLVAPE
LIASQGDHGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQPYDGDEEDVGK
SPWHLSFSFAFFLHGESTVCASVDVRQHPPVRTLTAKRLARLARLAADDAPRDTRDARPD
AAQHANVILAPFGLEGRVTGREWSDGDAATARLLDAWRQLYPLEHGCGAVEVECGGVRMR
YPLPYALLTEMETPAAAPPPAAAALAGRTLRALTTPHPHQTAELCYGEAVGDKSEDFADP
TRKTPCSCAKWRRRRTPRPPPFHRRAPRPARPQASAPAHHAPAHHTLSAPRTPREPTSGG
AAGACSPGSCGGASPAPAVSAPSSAGAPPPSPHLTALTTHQTGGAVPTTLHTPAPTPDPH
APPTPAPPSAPPHKTYTQVHPNVYVSAPELLRRPALPPAEQRLDPLEDEHSLHMLYDYTT
VHAWLEHPVKRFKTDTREWSEELALGARGGDLYAGHAHTPPPAPHPARPQRPARAHHTPL
APLAADVKQERLDEDSKEYKNLFTSDGLCPTLKDLDQIFDNSDDAASGDETVRLALAGGA
GEAGRCDEARCGGRCVRAEELSKMFPTPPSMEAHAQPSPGFSLPEEATPQPHRHLLPSSP
PPDPIEDWSYVFKPPTVCKYVGSSKYAPLVALPSQLLPSVALPPHAVYRPRWQQDAKRDP
DTDTDTDTKRNGTKNSTNNTNSSSSGGVKRSASPGTEQSGAGAKSGAAPGVLARQVGNIR
GADVGTYLSHGEAAAGELDAGRCDCGFSAIVNRRLAHRAGLFYEDEMEITGLAEDPGGRG
GVRGTRGAAGLAEVAGVLAEQCAAPPGGPASALSRAAADAKPSHDHLRLNLLEYSDGGAA
AASALREAAAGGPVAGASAGAGAGAGAHCAVHRWPFIGARAPRSSRDVVRLMRRLRPLLQ
DAIQKRCCGARMWDGVTGPLTWRQFHRLAGRGNEDLCEPQPVPPLLVGHDRDWISLSPYA
LRHWERLSLEPYSYARDVAYVALAPDGEALTDPLRAFFRELSTAYEACRLGRHQPIARIA
RDGIVRTAAGERSDTDDWAGELPPGRLGEYIRAYADTLRELTSQLSSMNIERVLFEAEKG
NNMRPPAAPEQPGTPGEPGEGGEVPAGGSASAPVWEEDEAGPPALVLYLVEPPAAHAHRA
HALHALLRLAAQAHHHLHHHNPYIKIISLEGVYECWAGRGAWGAGRGGGAELRTLAFSVF
SGARRLLQHQPNGKSLTGFGTAANANLFLNNKDEKNRAAYRLFTPAWVLAPPRALREVAE
TWGTACGEQCSVLFVAYCLSHDQRWLLAAATDARGELLDTAAINIHVPARSRRRRSAPAR
RLGLTKLMDFTLGVMSQAAQPWRLVVGRVGRIGHGELKGWSYLLSRKNLVRASSVLREIC
GSCAALYPGGAPCVLSACLVSTEPDPCLRLMADRFTPDERFSQASIQSHLHTPRDVTATH
ILVFPTSAKTQSNQMPFEQPMANGEDNDIFMDVDMGDEDIGEDNMADLIINDMFTNMWAQ
SSPIHLINIINEQVGTILQQPLALGYLVSTAPLGAMPAWWWAGCAHLRDSCPAFLKNALH
LHSGSAQTSDDFTSLMQRRDNNSHPLDSQTTTDVLRYVLEGYNALSWLTLDGSTHDRLSC
LPLHVQALMQLYHTAAALG
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaaaatcaccaaacaaacggtgctagcctcgaggattgccacacaaacttc
ttcgccttgacggagctgtatggcataaaatggcgtaagctggtatggcagcgggagtgc
ggcgggggcgggggcaaaggcgaggagggcgcggctccgctaggcgaccccgtgatcagc
agctacgcgcgttgcctcgccggagacattctgtgcgtgtggcggcgcgtgccctcgcag
cagtcgcccgacctgtacgacatgcccgccccgccgccgctctcgctgcgcgccgccaag
gagctctggatcttctggtacggcgaggagcccgacctcagcgggctagttgcgccagag
ctcattgccagccaaggcgaccacggctcatgggaaagtggactctcctacgagtgccga
tccctgctcttcaaggcattgcataacctcatcgaaagatgcttgttatcgcgggacttt
gtgagactgggaaagtggtttgtccaaccttacgatggcgacgaagaagacgtcgggaaa
agtccgtggcacttgtcgttctcgttcgcgttcttcctgcacggcgagagcacggtgtgc
gcgtcggtggacgtgcgccagcacccgcccgtgcgcacgctcaccgccaagcggctggct
cgtctcgcgcgtctcgccgcagacgacgcgccacgcgacacacgcgacgcacgccccgac
gcagcacaacacgccaacgtgatcctggcgccgttcggtctggagggtcgcgtgacggga
cgcgagtggagcgacggcgacgcggccacggctcgtctgctggacgcctggcgacagctc
tacccgctggagcacggctgcggcgctgtagaggtggagtgcggcggcgtgcgcatgcgc
tacccgctgccgtacgcgctgctgacggagatggagacgccggccgcagcgccgccgccc
gcagccgccgcactggccggccgcacactgcgcgcactcaccacgccccacccccaccag
acggcggagttgtgttacggcgaggcggtgggcgacaagagcgaggactttgctgacccc
acgcgcaagactccctgctcctgcgcaaagtggcggcgccggcgcacgccccgccccccg
cccttccaccggcgagcccctcgccccgcgcgcccgcaggcctccgcccccgcgcaccat
gcgcccgcgcatcacacgctctctgcgccgcgcacgccgcgcgaaccaacgtcgggcggt
gccgcgggggcgtgctcgccgggcagctgcggcggcgcctcgcccgcgcccgcagtctcc
gcgccctcctccgccggcgccccgcccccctcgccacatctcaccgcgctgaccacgcac
cagacgggcggcgcagtgccgactacgctgcacacgccggcgcccacgcctgacccgcac
gcgccgcccacgcccgcgcctccctccgcgccgccccacaagacctacacgcaggtacat
ccgaatgtgtatgtttcggcgccggagctgctgcgccggcccgcgctgcctcccgccgag
cagcgcctggaccccctcgaggatgagcactcgctgcacatgctctacgactacaccacc
gtgcacgcatggttggagcacccagtgaagcggttcaagacggatacgagggagtggagc
gaggagttggcgctgggcgcgcgcggcggtgacctgtacgccggccacgcccacaccccg
cctccagcgccgcaccccgcgcgcccacagcgcccagcgcgcgcccaccacaccccgctc
gcgcccctcgccgctgacgtcaaacaagagcgcctcgacgaagacagcaaggagtacaag
aacctgttcacgtcggacggcctgtgccccacgctcaaggacctcgaccagatcttcgac
aactcggacgacgcggccagcggtgatgaaacggtaagacttgcgttggcgggcggggcg
ggtgaggcggggcggtgcgacgaggcgcgctgcggcgggcgctgcgtgcgcgctgaggag
ctcagcaagatgttccccacgccgcccagcatggaggcgcacgcgcagccctcgcccggc
ttttctctgcccgaggaggccacgccgcagccgcaccggcatctgctgcccagctcgccg
ccgcccgatcccattgaggactggtcgtacgtattcaagccgccgactgtgtgcaagtac
gtgggctcgtccaagtacgcgccgttggtggcgctgcccagccagctgctgcccagtgtg
gcgctgccgccgcacgcagtgtaccggccgcgctggcagcaagacgccaagcgcgatccc
gacacagacaccgacaccgacaccaagcgcaacggcacgaaaaatagtacaaacaatacc
aatagcagtagtagcggcggcgtgaagaggtcagcgtcgccgggcacggagcagagcggg
gcgggcgcgaagagtggcgctgcgcctggcgtactggcgcggcaagtgggcaacatccgc
ggggcggacgtgggcacttacctgtcgcacggggaggcggcggcgggcgagctggacgcc
ggccgctgcgactgcggcttcagcgccatcgtcaaccgccgcctcgcgcaccgcgctgga
ctcttctatgaggatgagatggagataacgggtctggcggaggacccgggcgggcggggc
ggagtgcggggcacacggggcgccgccgggctggcggaggtggcgggcgtgctggcggag
cagtgcgcggctcctcccggcgggcccgcctccgcgctctcccgcgccgccgccgacgcc
aagccctcacacgaccacttgcgccttaaccttctcgaatacagtgacggaggcgcggct
gcggcgagcgcgttgcgtgaggcggccgcgggcgggccggtggcgggagcgagcgcggga
gcgggagcgggagcgggcgcgcattgcgccgtacatcgctggccatttatcggcgcgcgc
gccccgcgctcctcccgcgacgtcgtcagattgatgcgtcgacttcggccattgttacaa
gacgccatccagaagcggtgttgtggcgcccgtatgtgggacggcgtcacggggccgctg
acgtggcgacagttccaccggctggcggggcgcggcaacgaggacctgtgtgagccgcag
cccgttccgccgctgctggtcggccacgatcgtgattggatctccctgtcgccctatgcc
ctgcgccactgggagaggctgtcattagaaccctactcgtacgcgcgcgacgtcgcctac
gtggcgctagcgccggacggcgaggcgctcacagatccgctccgagcgttctttcgcgag
ctttcgacggcatacgaggcgtgccggctgggcaggcatcagccgatcgcgaggatagcg
cgggacggcatcgtgcggacggcggcgggcgagcgctccgacaccgacgactgggccggc
gagctgccgccgggccgcctcggcgagtacatcagggcgtatgcggacacgctgcgggag
ctcacctctcaactgtcgtcgatgaacatagagcgcgtactcttcgaggcggagaaggga
aacaacatgcggccgccggcggcgcccgagcaacccggcacgcccggggagccgggagag
ggcggcgaggtgccggccggcggcagcgccagtgcgcccgtgtgggaggaggacgaggcg
ggcccgccggcgctcgtgttgtacctcgtggagccgccagccgcgcacgcgcaccgagcg
cacgccctacacgccttgttgaggctcgccgcacaggcacatcaccatctgcatcatcac
aatccttatataaagattatatcgctggagggcgtgtacgaatgttgggcggggaggggc
gcgtggggcgcggggcgaggtgggggcgcggagctgcgcacgctggcgttcagcgtgttc
agcggcgctcgccgactgctgcagcaccaacccaacggcaagtcgctcaccggcttcggc
accgccgccaacgcaaacctcttcctcaataacaaagatgagaagaaccgtgcggcatac
cggctgttcactccggcgtgggtgctggcaccgccgcgtgcgctgcgcgaggtggcggag
acgtggggcacggcgtgcggcgagcagtgctccgtgctgttcgtggcgtactgcctgtcg
cacgaccagcgctggctgctggccgccgccactgacgcgcgcggcgagctgctcgacacc
gccgccatcaacatacacgtacccgccaggtcgcggcggcggcggtcggcgcccgcacgg
cgactaggcctcaccaagctgatggacttcacgctgggcgtgatgtcgcaggccgcgcag
ccctggcggctcgtcgtcggccgcgtcgggcgcatcggtcatggcgaactgaaaggttgg
agctacctgctgtcgcgcaagaacctggtgcgcgcgtccagcgtgctgcgcgagatctgc
ggcagctgcgcggcgctgtacccgggcggagcgccctgcgtgctgtccgcctgcctcgtg
tccacggagcccgacccctgcctgcgcctcatggcggaccgcttcacgcccgacgagcgc
ttctcgcaggcctccatacagtcacatctgcacacgccgcgcgacgtcaccgccacgcac
atactcgtcttccccacctccgctaaaacacagtcgaatcagatgccgttcgagcagccg
atggcgaacggcgaggacaacgacatcttcatggacgtggacatgggggacgaggacatc
ggcgaggacaacatggccgatctgatcatcaacgacatgttcaccaacatgtgggctcag
agcagtcccatacatcttattaatataataaatgagcaggtgggcacgatcctgcagcag
ccgctggcgctgggctacctggtgtcgactgcaccgctgggcgccatgcccgcctggtgg
tgggcggggtgtgcacatctgcgcgactcctgtcccgccttcctcaagaacgcgctgcac
ctgcactccggcagcgcgcagacctccgacgacttcacctcgctgatgcagcgccgcgat
aacaactcgcatcctctcgactcgcagaccaccaccgacgtcctcaggtatgtgctggag
ggatacaacgcgctgtcatggctgacgctggatggcagcacacacgaccgcctgtcctgc
ttaccgctgcacgtccaggcgctgatgcagctctaccacactgccgccgcgctgggctaa
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