Papilio machaon (common yellow swallowtail): 106720820
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Entry
106720820 CDS
T05138
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106720820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmac03021
]
106720820
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106720820
Transcription machinery [BR:
pmac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106720820
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106720820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCCH_3
zf-CCCH_2
zf-CCHC_2
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
106720820
NCBI-ProteinID:
XP_014371099
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MEVLVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFYSNPGGCNNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCINYLSGFCPDGPNCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASSCNKIPQEKREAAQKQEEARYRALGYVKPANESDDVNAHRL
RLMHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQNTQNNQTMYKKN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaagtccttgttgctaacgtcgaccatattaagttcgatatagattacgctttggaa
cagcaatatggagctctacctttaccatttccaggaatggataaatcaacggctgcggta
tgcgaattttacagtaaccctggaggttgcaacaatggtcctcagtgcccgtacagacat
gtgcgcggcgaccgcactgtggtatgcaagcattggttaagagggctttgtaagaagggg
gatcaatgtgaattcctccatgagtatgatatgtctaagatgccggaatgttacttctac
gcccgatttaatgcatgccacaataaagaatgtccatttttacatattgatcctgagagc
aagattaaagactgtccatggtatgacagaggcttctgtcggcacggcccacactgcaga
cacaggcatgttcgaagagttttgtgcataaattacttgtcaggcttctgtccggatggg
ccaaattgcaaatacatgcatcccaggtttgagcttcctgcaccacccgagcagaccaaa
gatgccaagagattgccagtctgccactactgctctgaagttgggcataaggcatcatct
tgcaacaaaattcctcaagagaaaagagaagcagcccaaaaacaagaggaagcgagatac
cgagcccttggttatgtcaagccggccaacgagtctgatgatgtcaatgctcatcgcctc
cgtctcatgcacaagccattggaagaagtcacatgtttcaagtgcggaaccaagggtcat
tatgctaacaagtgccccaaaggtcaccttgctttcctctccaatcagaatactcaaaac
aatcagaccatgtacaaaaaaaactag
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