Papilio machaon (common yellow swallowtail): 106720866
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Entry
106720866 CDS
T05138
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106720866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmac03041
]
106720866
Spliceosome [BR:
pmac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106720866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
106720866
NCBI-ProteinID:
XP_014371150
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSDDEEVVVKKAKQVHYGSLEEQEKARLAALAAAAREGVEDNGGKDLGDIQISNEYMELE
EEMSKDKKALLEEFERRRKARQLNVSTDDDEMALVILLGEDAIHKKLEEEEARIERDRGR
EGTWYHEGPPELRDARLWIARYSLPRAKQRLGEDAIHKKLEEEEARIERDRGREGTWYHE
GPPELRDARLWIARYSLPRAKQRLMKAREDLKLPGSVRAAAKQESQRKASAMSIYCSQIG
DSRPISFCRFSDDSQMLITSSCEGPMASLEGHGPARVARVEFHPSGRFLATTVFDNSWRL
WDLETATEVLHQEGHAKQVYSIAFQGDGSLAATGEGPMASLEGHGPARVARVEFHPSGRF
LATTVFDNSWRLWDLETATEVLHQEGHAKQVYSIAFQGDGSLAATGEGPMASLEGHGPAR
VARVEFHPSGRFLATTVFDNSWRLWDLETATEVLHQEGHAKQVYSIAFQGDGSLAATGGM
DAFGRVWDVRTGRCVMFLEGHLGPVLGAAWHPAGHRLATAAADHQVKIWDIRKRAPIYTI
PAHTHLVSDVRYQRSHGHYLATSSYDGSGKLWSDPAWHPLRTLSGHDNKVMSVDISLDNK
YIATCSYDRTFKLWAPDLA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagaagtggtggtgaaaaaggctaaacaagtccattatggatctctt
gaggaacaggagaaggcacggctggctgctcttgccgccgctgccagagaaggcgtcgaa
gacaatggcggcaaagatcttggtgatattcaaatttcaaatgaatatatggaactggaa
gaggaaatgtccaaagacaaaaaggcgctactggaagagtttgaaaggagaagaaaagca
agacaactgaatgtatctacagacgatgatgagatggcgctagtaatacttcttggcgag
gatgctatacataagaaattggaagaggaagaagccagaatagagagggacagaggaaga
gaaggtacctggtaccatgaaggtcctccggaactgagagatgctagactgtggatagct
aggtattcattgcctagagctaaacaacgtcttggcgaggatgctatacataagaaattg
gaagaggaagaagccaggatagagagggatagaggaagagaaggtacctggtaccatgaa
ggtcctccagaactgagagatgctagactgtggatagctaggtattcattgcctagagct
aaacaacggttaatgaaggcccgtgaagatctaaagttacctggcagtgtgcgtgccgca
gcaaagcaggagtctcaaaggaaggcctccgccatgtctatatattgtagccagataggt
gatagtcgtcccatcagcttctgcaggttcagtgatgatagtcaaatgctcatcacctcc
agctgcgaaggtccaatggcgtctttggaaggtcatggtccagctcgtgtggcgcgagtt
gagttccatccttcaggtcgcttcctcgccaccacagtctttgataactcctggcgtctc
tgggatcttgagacagcaacggaggtcctccatcaggaaggtcacgctaaacaagtgtac
agtatcgcttttcaaggtgatggctcattagccgctactggcgaaggtccaatggcgtct
ttggaaggtcatggtccagctcgtgtggcgcgagttgagttccatccttcaggtcgcttc
ctcgccaccacagtctttgataactcctggcgtctctgggatcttgagacagcaacggag
gtcctccatcaggaaggtcacgctaaacaagtgtacagtatcgcttttcaaggtgatggc
tcattagccgctactggcgaaggtccaatggcgtctttggaaggtcatggtccagctcgt
gtggcgcgagttgagttccatccttcaggtcgcttcctcgccaccacagtctttgataac
tcctggcgtctctgggatcttgagacagcaacggaggtcctccatcaggaaggtcacgct
aaacaagtgtacagtatcgcttttcaaggtgatggctcattagccgctactggtggtatg
gatgcattcggtcgtgtatgggatgtccgaactggacgctgtgttatgttccttgaggga
catcttggacctgtacttggtgctgcatggcatcctgctggacatcgcctcgccactgcc
gccgctgaccatcaggtaaaaatctgggatataagaaaacgagcaccaatttacacgata
cctgcgcacacgcatctagtgagcgatgtaagatatcagcgcagtcacggacactacctg
gcgaccagctcgtacgatggtagcggcaaactgtggtctgaccccgcctggcatccactg
cgtacactctcaggacacgataacaaggtgatgagtgtggacatttcactggacaacaag
tacatagcgacatgttcctatgaccgtacattcaaactttgggcaccggatctcgcttag
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