Papilio machaon (common yellow swallowtail): 106721013
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Entry
106721013 CDS
T05138
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106721013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmac03019
]
106721013
Messenger RNA biogenesis [BR:
pmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106721013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_WDR11_2nd
Beta-prop_ACSF4
WD_LRWD1
Frtz
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106721013
NCBI-ProteinID:
XP_014371323
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MDFGHPPPNMSMPPPGMGGPMGPPGRNNIRHNFRPFNYQMRFPPQGPLNMTQDDFDGKRL
RKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTT
RFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMV
WSHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDSKIVTCSDDGTLRI
FDFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALSTLHAHK
STVMDLKWNDNGNWLITASRDHLLKLFDIRKLGTELQVFRGHKKEASSVVWHPNHEGLFC
SGGSDGAILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTRNRPG
DQMRDKYNLNTLPPGVQDDHDLEEPAVIPGMGPEDKVEIFSSDTDKVIPGLDLDTTFVPM
EFEKKIKKVPYSKPIPRNFQAQWNHGPSVDDAASEALTQALVESVPGAVPLQQLTPSAIY
IYGKLITVDAGSKLEKAITEGPIALKRYIATGEIEELHDMMPHLEHDADDENFTPFEYPV
HNPDSENPDDEDKEKEDYIDDQFYDEENDVSLTEQNNEEQYNNYDNGSDMNNMGPMNNMP
QMGLMGPPMAMNMGPPMGPMNMPPPHMAGMPPMGNMPPIGSMPPMGSMPPMGSMPPMGNM
PPPFPDNGYTKNHYDSSFENQQFSQQDDEEYNEEDNFEQNYDEDGDSGMNDGFNRNQRWG
GNYRGRGHDYGRNHDRGRTQDRGRGRGINGHRGNRRGNSNPRGSPWTRRGGGSHRSFRRG
SKSISN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggacatcctccaccgaatatgagcatgcctcctcccggcatgggtggtcca
atgggcccaccgggtcgtaacaacatacgccataattttaggcctttcaactaccagatg
cgcttcccacctcagggtcccctcaacatgactcaagatgatttcgatggtaaacgtctc
cgtaaatctgttatgcgtaaaactgttgactataatgctgctattataaaagctttagaa
tgtcgtgtgtggcaaagagactggcgggacagacacgcactgcaaccggatgctatgtat
actcctgacctgttaccgccaccctcttaccctgataatcctattaacgctgtcacaaca
cgtttcgttaaaaccgccactaacaaaatgcgatgtccaatcttcgcagtagcgtggacg
ccagaaggtcgtagattaataactggagcatcttcaggagaattcacattatggaatgga
cttacttttaattttgaaacaatcttacaagctcatgattccccagtaagatctatggta
tggtcgcatggtgaaggctggatggtaactggtgatcattccggctttatcaagtattgg
caaagcaatatgaataatgttaaaatgtaccaagctcacaaagaagcagtaagaggaatt
agttttagccctagtgattctaagattgttacgtgttctgatgatggcacattacgtata
tttgatttctatagatgtcaagaagaaagaatattgagaggtcatggtgcagatgtaaag
tgtgtccaatggcatccaacaaaagctcttattgtatcaggaagtaaagataatcaacaa
ccaataaaattgtgggatcctaagtctggaactgcgttgtcaactcttcatgctcataaa
tctacagtaatggatttaaaatggaatgataatggcaattggcttataactgcatcaagg
gatcatttactaaaactatttgatatacgtaaacttggaactgaactacaagtatttaga
gggcataaaaaagaggcctcaagtgtagtatggcacccaaatcacgaaggactattttgt
tctggaggttctgatggagctattctattctggaatgtaggaactgataaagaagttggt
tgtattgaaggtgctcatgagtctattgtatggactatggcatggcatcctttaggacat
atattatgttcaggttctaatgatcacacatccaaattttggactcgaaatcgtcctgga
gatcaaatgagagacaaatataatttgaatactctaccaccaggtgtccaagatgaccat
gatttagaggaaccagctgttatacctggaatgggtcctgaagacaaagttgaaatattt
tcatctgacactgataaggttatacctggcttagatctggacacaacctttgtgccaatg
gaatttgaaaagaaaataaagaaagtaccatatagtaaacctataccaagaaacttccaa
gcgcagtggaatcatggtccatcagtagatgatgctgccagtgaagctttaactcaagct
ttagtggagtctgtgcctggtgctgtaccacttcaacaattgacaccctctgctatttat
atctatggtaaattaattactgttgatgctggctccaaactagagaaggcaataacagaa
ggacctattgctttaaaaagatacattgcaactggtgaaatagaagagttgcatgatatg
atgcctcatttagaacatgatgctgatgatgaaaatttcacaccatttgaatatcctgtc
cataatcctgattctgaaaatcccgatgatgaagataaagaaaaagaagattacattgat
gaccaattctatgatgaggaaaatgatgtttctcttacagaacaaaataatgaagaacag
tataataattatgacaatggctcagatatgaacaacatgggacctatgaataacatgcct
caaatgggcctaatgggacccccaatggctatgaatatggggcctccaatgggaccaatg
aatatgccaccaccccacatggctggtatgcctccgatgggcaatatgccaccaattggt
agtatgcctccgatgggtagcatgcctccaatggggagtatgcctcctatgggcaacatg
cctcctccttttcctgacaatggttacactaagaaccattatgattccagttttgagaat
caacaattttctcaacaagatgatgaagaatacaatgaagaagataactttgaacaaaat
tatgacgaggatggcgatagtggtatgaatgatggttttaatagaaatcaaaggtggggt
ggtaactatagaggaagaggacacgattatggtagaaatcacgatcgtggtagaacacaa
gatagaggtaggggccgcggtattaatggccatcgtggaaaccggagaggtaatagtaac
ccacgtggttccccctggacccgtaggggtggtggctctcatcgttcgtttagaaggggc
agcaaatcaatttctaactag
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integrated database retrieval system
