Papilio machaon (common yellow swallowtail): 106721018
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Entry
106721018 CDS
T05138
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Pathway
pmac04120
Ubiquitin mediated proteolysis
pmac04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106721018
04120 Ubiquitin mediated proteolysis
106721018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmac04121
]
106721018
Enzymes [BR:
pmac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106721018
Ubiquitin system [BR:
pmac04121
]
Ubiquitin ligases (E3)
U-box type E3
106721018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
106721018
NCBI-ProteinID:
XP_014371335
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MSELSQEEIRRRRLARLGALGATPSSPAPGSPPATPGASLTNTDTVNVQQPSSRLSPSPR
GSTESNTSSDSATINRENNFADGVSNSEVPDQNKIPSDSLIVTEKTENNLLDEMPDTKMT
DLSQTRQYNSFDSMGDDTLLSCGSVRVGSLPQSTVSGSEGASTREDSTSRSISPPQFVEP
PPVRPRTCVASPSCSRRSLSMEVDDVSERNSQSEQSQQEPMDIEEDPSQSPARKIHRTRT
VSCTELSEEQLRVIVSKILQISWSEEIVGGMFVPIVAAMLLDNPKLSLEELASEALIDII
TQLEDGADPLNQKLIAIAETTKRLMEDCGDDTLTSGPLGSESDNQKGGSTVNLVLPKTIP
TQGLAVSYLLRFYNNINLYEREHPKKSSEPPLSDLLQTLRTLIVNHLVLVLRGKFNLEKC
RKSPLLPYILIGSTPIGLIPEILLATYLEESFEEVFVPLLLGIREEMRRSVSPLNGRGHG
QALRALRSLCELRAGPRHALRPICALIVRLPSLCPPSVTTAPGREIARASFLGPFFAVSL
FAEENPRLAERLFATGSSDRSLAFALQRELEASRNTLHTICHNILLCPEAREPFLNYFAE
LLQRNEHRIRYRNDDRSLAGDGFMLNVCSVLQLLSIRIKLERVNPFYTFQPNTWIDIHDD
TRLYYTSQEAQDWLDALNKDPNHKWPEAKFQTVCWFLTLHMHHVALIPALHTHQRRIRAF
RDLQKVIEELMAAEPQWRNTYAALRNRELLRRWRRQIKRLQRSKQCAETALLDSDLMRRS
LQFYSSVCVLLTQQLEAARTADRAAANLESPDAGSGSESAAPSAEGGAPRAPHGPSAGSL
ADAFRATPEWYVEDIADFMLFAVQYVPQIVADYIEEPVVTWLLTAVCNSRLLKNPYLVAK
IVEVLFVINLSIPLKLKNVYERFMDHPMSQTSLPSALMRFYTDIETTGQSTEFYDKFTIR
FHISIILKGMWDRPIHKQAIVKESRSGRQFVKFINMLMNDTTFLLDECLTYLKRIHEAQE
GGPSTEVRARALAQDERQCRSYLTLARETVDMLEYLTVDIKEPFLRPELVDRLASMLNFN
LQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDSPHFHAALAADERSFRKELFE
EAAVRLAKSCIKTPNEIERFKALADNAYQIAVSNQQKSDEYADAPEEYRDPLMDTLMTDP
VVLPSGKVMDRSVILRHLLNSATDPFNRQPLTEDQLRPASELKEKIIQWQREKKSS
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgagtcaagaagagatacggcgacgtcgtttagcgcgactaggtgcgctg
ggagcaaccccttcttcccctgcccctggcagccctccagcaacgccgggtgcttccttg
actaacactgacacagtaaatgtgcagcaaccttcgtctcgcttatcaccgtcacctcgg
ggttccacagaatcgaacacatcatcggatagtgctactataaatagagagaataacttt
gcagatggagttagtaacagtgaagtgccagatcaaaataaaataccatcggatagtttg
attgtgacagaaaaaactgaaaataatttattggacgaaatgccagatacaaagatgact
gatctctcgcaaactagacagtacaacagttttgactccatgggtgatgacacattgtta
agttgtggatcagtgcgtgttggtagtttgccgcagtcaactgtgagtggttctgaaggg
gcatcaacaagagaggacagtacctccagatctatatccccacctcaatttgtggagccc
ccaccagtgcgaccacggacctgtgttgcatccccaagctgctctcgtcgctctctctca
atggaagtagatgatgtatcagaaagaaattcacaatcagaacagtcacaacaagaacct
atggatattgaagaagatccgtcacagtcaccagcaagaaagatccacagaacaaggaca
gtgagttgcactgaactgtctgaagagcaactaagagttattgtttctaagatacttcaa
atatcttggtctgaagagattgtgggaggaatgtttgtaccaattgtagctgctatgtta
cttgacaatcctaaacttagtttagaggaactagcatcagaggctcttattgatatcatc
actcagctcgaggatggagctgatccattaaatcagaaattaatcgcaatcgctgaaact
accaaaagactgatggaagactgtggggatgataccttgacgagtggaccgctaggttcc
gagtcggacaatcaaaaaggtggtagcaccgtaaacctggttctccccaagactatcccg
acacaaggtttagctgttagctatctattacgtttctacaataatattaatctttacgag
agagaacatccaaagaaaagttcagaaccacctttaagtgatttattacaaaccttaaga
accttaattgttaatcatttggtgttggtgctcagagggaaatttaatttggaaaaatgc
agaaaatcacccttgttgccttacatcttaattggtagcacaccaatcggcctaattcct
gaaatacttttggctacttatttagaagaatcttttgaagaggtgtttgtgccactcctg
ttgggtataagagaggagatgcgtcggagcgtgtctccactgaacggtcgaggtcacggg
caggcgctgcgtgccctacgctccttgtgcgaactacgcgcggggccgcggcacgcgctt
cgcccaatctgcgctctcatcgtccgcctgcccagcctttgccctccttcggttactacc
gcaccgggacgagaaattgctagagccagcttcttaggaccattctttgctgtatcgctt
ttcgcggaagagaatcctcgtttggcggaacgtttattcgcgacggggtccagtgaccgc
agcctcgcattcgcattgcaacgcgaattggaagcgagcaggaacactcttcacacgatc
tgccacaatatactgctctgtcctgaagcgagagaacccttcctcaattactttgcggaa
ctactccagagaaatgaacacagaatccgctacagaaacgatgacagatcattagctggt
gatgggttcatgctgaacgtatgttcagtactacagctgctgtctatccgcatcaagctg
gagcgcgtcaaccccttctacactttccagcctaacacttggatagacatacatgacgac
acccgcctctactacacctcgcaggaggcgcaggactggctcgatgcattgaacaaagat
ccgaatcacaaatggcccgaggcgaagttccagacggtctgctggttcctgacacttcac
atgcatcatgtagctcttatacctgctctgcacactcaccagcgacgtataagagcattc
cgcgacctgcagaaggtgatagaggaactgatggccgcggagccgcaatggcgtaacacg
tacgcagcgctgcgcaatcgcgagctgttacggcgatggcgacgacagatcaaacggctc
cagaggtcaaaacaatgtgcggagacagcgctacttgacagtgacctgatgcgtcgtagc
ttgcaattctactcgtcagtatgcgtactgctgactcagcagttagaggctgcgaggacc
gctgaccgggcggccgctaacctggagagccccgacgcgggcagtggcagcgagagcgca
gcccccagtgccgagggcggagcacctcgcgctccgcacgggcccagcgcgggctcgctg
gcagacgccttccgcgccaccccggagtggtacgtcgaggatattgctgacttcatgctc
tttgctgtgcaatacgtgccacagatagtggcggactatatagaggagccggtggtgacg
tggctgctgacggcggtctgcaactcgcgtctcctcaagaacccctacctcgtcgccaag
atcgtcgaggtgttgttcgtcatcaacctatctatacctctcaagctcaaaaatgtctat
gaaagattcatggaccacccgatgtcgcagacgtcgctgccgagcgcattaatgcgtttc
tacacagacatagagacaactggtcagagcactgagttctatgacaagttcacaatacgc
tttcacatcagcatcatactgaagggcatgtgggaccgtcctatacataaacaggctata
gtgaaggagtctcgctctggccggcagttcgttaagttcatcaacatgctgatgaatgac
accacattcctactcgacgagtgtcttacgtacttgaaacgtatccacgaggcacaagaa
ggtgggccttcaactgaagtacgcgcgagagcattagcacaggacgagagacagtgccgc
tcatatctcacactcgccagggagacggtggacatgttggaatacctgacggtggacatc
aaggagccgttcctgcgcccagagctggtcgaccggctcgcctccatgctcaacttcaac
ctgcagcaactctgcggacccaagtgtaaaaacctcaaggtgcgtcgtccggagaagtac
gggtgggagccgcgacggctgctgagtcagctggttgacatctacttgcacctcgactcg
ccgcatttccacgccgcactcgccgctgacgagagatcattccgcaaggagttgtttgag
gaggcagcggtgcgtttggccaagtcttgtataaagacgcccaatgaaatagaacgcttc
aaagcgctcgctgacaatgcatatcaaattgccgtatcaaatcaacaaaagagcgacgag
tacgcagacgcgcctgaagagtaccgcgacccgctaatggacaccctgatgactgacccc
gtcgtcttaccatcggggaaggtgatggacaggtcggtgatcttacgacatcttctcaac
agtgccacagaccccttcaacaggcaaccgctcactgaagaccagttgcgtccagcttca
gagctcaaggagaagataattcaatggcaacgcgaaaagaaatcttcgtaa
DBGET
integrated database retrieval system
