Papilio machaon (common yellow swallowtail): 106721100
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Entry
106721100 CDS
T05138
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pmac
Papilio machaon (common yellow swallowtail)
Brite
KEGG Orthology (KO) [BR:
pmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmac03009
]
106721100
Enzymes [BR:
pmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106721100
Ribosome biogenesis [BR:
pmac03009
]
Eukaryotic type
Pre-60S particles
Helicases
106721100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
106721100
NCBI-ProteinID:
XP_014371461
UniProt:
A0A194RS99
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MVNKDWIKVTPALSKPVLRCIHKQGFKTMTPIQAAVIPLILSCKDVVAEAVTGSGKTLAF
VVPMLEMLLKKEKESPLRKDFVYSVIISPTRELATQIFQVIELFLKEPELLHIKMALLVG
GRPIDVDVDSISKGAQLVVCTPGRLEDLLSERKQLNLAGRLKELEFLVLDEADRLLDLGF
SATLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVLISVKEKSTISTPLALENFY
VIVEPEDKFLFLLNFIRNRKTMKGLFFLPTCACVDYWADVLPLFIPDMKIFAIHGKMKQK
RHKILEQFREADNTILLCTDLLARGLDIPEVEWVVQWEPPTSPAALVHRVGRTARGGAKG
FSLLPLLPTEDSYIPFIKTNQKVELKDWRKSTDDIKISQKLRDKVLTILHEQQKKDRGIL
DKGQRAFVSHIQAYSKHECNLLLQLKELPLGHIATSYGLLKLPLMPEIKDEHKKQFIGPK
EQIDFNSIPYKDKQKETSRLQKLEEFKKTGIWPSKKKKKMVQSQPWQQAKQNKEERKQRK
KKRKEAQKGAEGKRGKKRRAVTQEEIDELAADVALIKKLKKRKITKEQFDDAFDVNK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaaagattggattaaagtaacacctgctttatcaaaacctgttctgagatgc
atccataaacaaggttttaaaacaatgactccaatacaagcagctgtaattcctcttata
ttatcgtgtaaagatgttgtggcagaagcagtcactggatcaggtaaaaccctcgccttt
gtcgttccaatgctagaaatgctattaaaaaaagaaaaggaatcaccattgcgaaaggat
ttcgtttattcagtgataatatcgccaacgagagaactggccacacagatttttcaggtc
atagaattattccttaaagaaccagagctattgcatataaaaatggcattgctggttgga
ggtaggccaatagatgtggatgtggacagcatcagcaagggtgcacagttggtagtatgt
actcctggtcgcttagaggatcttttgtcagagaggaaacaactaaatttagctggccgg
ctaaaagaattggaattcttagtacttgatgaagcagaccgtttattagaccttggcttc
agtgctacactcacaacaatccttcagtatttaccaagacaacggaggacgggtttattt
tctgcaacacagactaaagaactacaagatctagttagagctggattacgaaatccagtt
ttaataagtgtcaaagaaaagtctactataagtactccactagctttagaaaatttttat
gtaatcgtcgaacctgaagataagttcttatttctattaaactttataaggaataggaaa
acaatgaaagggttgttctttctaccgacatgtgcatgtgtagattattgggcagatgtt
ttaccattatttatacctgatatgaagatatttgcaatacatggtaaaatgaaacaaaaa
cgacataaaatattggaacaatttcgtgaagctgataacacaatactgctttgtacggat
ttattggctagaggtctggacatacctgaagtagaatgggtggttcaatgggaaccccct
actagtcctgctgctttagtacaccgtgtgggccgtacagctcgtggaggtgctaaaggc
ttttcgttactgccattattgccaaccgaagattcatatatacctttcatcaagaccaat
cagaaggttgaattgaaagactggcggaaatcaactgatgacattaaaattagtcagaaa
ttaagggataaggttttaacgatacttcatgagcaacagaaaaaagacagaggcatacta
gataaaggtcaacgcgcatttgtatctcatatacaagcatattctaaacatgaatgcaac
cttcttttgcaattaaaagaactacccctaggtcacatagcaaccagctatggtctacta
aagttgccattaatgccagaaatcaaagacgaacataaaaaacaatttattggacctaaa
gagcaaatagactttaattcaataccatataaagacaaacagaaggaaacaagcagatta
cagaagttagaagaattcaaaaagactggtatttggccttctaagaagaaaaagaagatg
gttcagtcacaaccatggcaacaggcaaagcagaataaagaagaaaggaagcaacgaaag
aagaaaaggaaagaagcacagaagggtgcagaaggaaagagaggtaagaagcggcgggcg
gtcacacaagaagaaatagacgaactagcagccgatgtggcacttataaagaaattaaag
aaaagaaaaataactaaagaacagtttgatgatgcatttgacgtaaataaatag
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